BLASTX nr result

ID: Dioscorea21_contig00031945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031945
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517801.1| DNA topoisomerase II, putative [Ricinus comm...    76   2e-12
emb|CBI24922.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...    76   3e-12
ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom...    75   4e-12
ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis...    75   4e-12

>ref|XP_002517801.1| DNA topoisomerase II, putative [Ricinus communis]
           gi|223543073|gb|EEF44608.1| DNA topoisomerase II,
           putative [Ricinus communis]
          Length = 197

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/39 (89%), Positives = 37/39 (94%)
 Frame = +1

Query: 121 KKTIEETYQKVTQLEHILLRPDTYIGSIEKHTQDLWVFE 237
           KKTIEETYQK +QLEHILLRPDTYIGSIEKHTQ LWV+E
Sbjct: 18  KKTIEETYQKKSQLEHILLRPDTYIGSIEKHTQTLWVYE 56


>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/65 (61%), Positives = 44/65 (67%)
 Frame = +1

Query: 43  MAIEKMVPLQXXXXXXXXXXXXXXXXKKTIEETYQKVTQLEHILLRPDTYIGSIEKHTQD 222
           MA++  +PLQ                 KTIEETYQK +QLEHILLRPDTYIGSIEKHTQ 
Sbjct: 1   MAVDNKLPLQSSNNANMPAKPAG----KTIEETYQKKSQLEHILLRPDTYIGSIEKHTQA 56

Query: 223 LWVFE 237
           LWVFE
Sbjct: 57  LWVFE 61


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/65 (61%), Positives = 44/65 (67%)
 Frame = +1

Query: 43  MAIEKMVPLQXXXXXXXXXXXXXXXXKKTIEETYQKVTQLEHILLRPDTYIGSIEKHTQD 222
           MA++  +PLQ                 KTIEETYQK +QLEHILLRPDTYIGSIEKHTQ 
Sbjct: 1   MAVDNKLPLQSSNNANMPAKPAG----KTIEETYQKKSQLEHILLRPDTYIGSIEKHTQA 56

Query: 223 LWVFE 237
           LWVFE
Sbjct: 57  LWVFE 61


>ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-like [Cucumis
           sativus]
          Length = 1460

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/65 (60%), Positives = 44/65 (67%)
 Frame = +1

Query: 43  MAIEKMVPLQXXXXXXXXXXXXXXXXKKTIEETYQKVTQLEHILLRPDTYIGSIEKHTQD 222
           M +EK  PLQ                KKTIEE YQK +QLEHILLRPDTY+GSIEKHTQ+
Sbjct: 1   MVVEKKRPLQNSNAANVDSNPAGP--KKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQN 58

Query: 223 LWVFE 237
           LWV+E
Sbjct: 59  LWVYE 63


>ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis sativus]
          Length = 1459

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/65 (60%), Positives = 44/65 (67%)
 Frame = +1

Query: 43  MAIEKMVPLQXXXXXXXXXXXXXXXXKKTIEETYQKVTQLEHILLRPDTYIGSIEKHTQD 222
           M +EK  PLQ                KKTIEE YQK +QLEHILLRPDTY+GSIEKHTQ+
Sbjct: 1   MVVEKKRPLQNSNAANVDSNPAGP--KKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQN 58

Query: 223 LWVFE 237
           LWV+E
Sbjct: 59  LWVYE 63


Top