BLASTX nr result
ID: Dioscorea21_contig00031945
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00031945 (295 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002517801.1| DNA topoisomerase II, putative [Ricinus comm... 76 2e-12 emb|CBI24922.3| unnamed protein product [Vitis vinifera] 76 3e-12 ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v... 76 3e-12 ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 75 4e-12 ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis... 75 4e-12 >ref|XP_002517801.1| DNA topoisomerase II, putative [Ricinus communis] gi|223543073|gb|EEF44608.1| DNA topoisomerase II, putative [Ricinus communis] Length = 197 Score = 76.3 bits (186), Expect = 2e-12 Identities = 35/39 (89%), Positives = 37/39 (94%) Frame = +1 Query: 121 KKTIEETYQKVTQLEHILLRPDTYIGSIEKHTQDLWVFE 237 KKTIEETYQK +QLEHILLRPDTYIGSIEKHTQ LWV+E Sbjct: 18 KKTIEETYQKKSQLEHILLRPDTYIGSIEKHTQTLWVYE 56 >emb|CBI24922.3| unnamed protein product [Vitis vinifera] Length = 1452 Score = 75.9 bits (185), Expect = 3e-12 Identities = 40/65 (61%), Positives = 44/65 (67%) Frame = +1 Query: 43 MAIEKMVPLQXXXXXXXXXXXXXXXXKKTIEETYQKVTQLEHILLRPDTYIGSIEKHTQD 222 MA++ +PLQ KTIEETYQK +QLEHILLRPDTYIGSIEKHTQ Sbjct: 1 MAVDNKLPLQSSNNANMPAKPAG----KTIEETYQKKSQLEHILLRPDTYIGSIEKHTQA 56 Query: 223 LWVFE 237 LWVFE Sbjct: 57 LWVFE 61 >ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera] Length = 1489 Score = 75.9 bits (185), Expect = 3e-12 Identities = 40/65 (61%), Positives = 44/65 (67%) Frame = +1 Query: 43 MAIEKMVPLQXXXXXXXXXXXXXXXXKKTIEETYQKVTQLEHILLRPDTYIGSIEKHTQD 222 MA++ +PLQ KTIEETYQK +QLEHILLRPDTYIGSIEKHTQ Sbjct: 1 MAVDNKLPLQSSNNANMPAKPAG----KTIEETYQKKSQLEHILLRPDTYIGSIEKHTQA 56 Query: 223 LWVFE 237 LWVFE Sbjct: 57 LWVFE 61 >ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-like [Cucumis sativus] Length = 1460 Score = 75.5 bits (184), Expect = 4e-12 Identities = 39/65 (60%), Positives = 44/65 (67%) Frame = +1 Query: 43 MAIEKMVPLQXXXXXXXXXXXXXXXXKKTIEETYQKVTQLEHILLRPDTYIGSIEKHTQD 222 M +EK PLQ KKTIEE YQK +QLEHILLRPDTY+GSIEKHTQ+ Sbjct: 1 MVVEKKRPLQNSNAANVDSNPAGP--KKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQN 58 Query: 223 LWVFE 237 LWV+E Sbjct: 59 LWVYE 63 >ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis sativus] Length = 1459 Score = 75.5 bits (184), Expect = 4e-12 Identities = 39/65 (60%), Positives = 44/65 (67%) Frame = +1 Query: 43 MAIEKMVPLQXXXXXXXXXXXXXXXXKKTIEETYQKVTQLEHILLRPDTYIGSIEKHTQD 222 M +EK PLQ KKTIEE YQK +QLEHILLRPDTY+GSIEKHTQ+ Sbjct: 1 MVVEKKRPLQNSNAANVDSNPAGP--KKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQN 58 Query: 223 LWVFE 237 LWV+E Sbjct: 59 LWVYE 63