BLASTX nr result

ID: Dioscorea21_contig00031934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031934
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002451109.1| hypothetical protein SORBIDRAFT_05g024215 [S...    63   3e-08
ref|XP_002454312.1| hypothetical protein SORBIDRAFT_04g028480 [S...    62   5e-08
gb|EEE67720.1| hypothetical protein OsJ_25400 [Oryza sativa Japo...    59   4e-07
gb|EEC82591.1| hypothetical protein OsI_27147 [Oryza sativa Indi...    59   4e-07
gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas...    59   5e-07

>ref|XP_002451109.1| hypothetical protein SORBIDRAFT_05g024215 [Sorghum bicolor]
           gi|241936952|gb|EES10097.1| hypothetical protein
           SORBIDRAFT_05g024215 [Sorghum bicolor]
          Length = 357

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 24/66 (36%), Positives = 36/66 (54%)
 Frame = +3

Query: 54  WHHIWKLKVAPRIKILVLKLAHGKLPTGAYLYNLNIGSASICHFCGIHPETDEHLIWNCR 233
           W H+W +K+  +IK+   +LAH  LPTG  L N N+ + + C  CG   +T  H +  C 
Sbjct: 29  WKHLWSMKIPSKIKVFCWRLAHNSLPTGTILKNKNLAATTNCKICGAEEDTWIHSLLQCN 88

Query: 234 IAAICW 251
           I+   W
Sbjct: 89  ISKCVW 94


>ref|XP_002454312.1| hypothetical protein SORBIDRAFT_04g028480 [Sorghum bicolor]
           gi|241934143|gb|EES07288.1| hypothetical protein
           SORBIDRAFT_04g028480 [Sorghum bicolor]
          Length = 316

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 24/66 (36%), Positives = 36/66 (54%)
 Frame = +3

Query: 54  WHHIWKLKVAPRIKILVLKLAHGKLPTGAYLYNLNIGSASICHFCGIHPETDEHLIWNCR 233
           W H+W +K+  +IK+   +LAH  LPTG  L N N+ + + C  CG   +T  H +  C 
Sbjct: 29  WKHLWSMKIPSKIKVFCWRLAHNSLPTGTILKNKNLTATANCKICGAEEDTWIHSLLQCN 88

Query: 234 IAAICW 251
           I+   W
Sbjct: 89  ISKCVW 94


>gb|EEE67720.1| hypothetical protein OsJ_25400 [Oryza sativa Japonica Group]
          Length = 391

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/85 (34%), Positives = 42/85 (49%)
 Frame = +3

Query: 3   VYDFLNSESFNLNSWHGWHHIWKLKVAPRIKILVLKLAHGKLPTGAYLYNLNIGSASICH 182
           +Y  LNS     ++W     +WK K  PR++     LA  +LP    L   NI  + +C 
Sbjct: 211 LYGILNSRPTCCSNWK---FVWKNKAPPRVQFFAWLLAKDRLPMRVNLKKKNITPSDVCE 267

Query: 183 FCGIHPETDEHLIWNCRIAAICWNV 257
            C I PET EHL  +C +A   W++
Sbjct: 268 ICKIAPETAEHLFLHCSVAKAFWDL 292


>gb|EEC82591.1| hypothetical protein OsI_27147 [Oryza sativa Indica Group]
          Length = 253

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/85 (34%), Positives = 42/85 (49%)
 Frame = +3

Query: 3   VYDFLNSESFNLNSWHGWHHIWKLKVAPRIKILVLKLAHGKLPTGAYLYNLNIGSASICH 182
           +Y  LNS     ++W     +WK K  PR++     LA  +LP    L   NI  + +C 
Sbjct: 73  LYGILNSRPTCCSNWK---FVWKNKAPPRVQFFAWLLAKDRLPMRVNLKKKNITPSDVCE 129

Query: 183 FCGIHPETDEHLIWNCRIAAICWNV 257
            C I PET EHL  +C +A   W++
Sbjct: 130 ICKIAPETAEHLFLHCSVAKAFWDL 154


>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 869

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/85 (35%), Positives = 46/85 (54%)
 Frame = +3

Query: 6   YDFLNSESFNLNSWHGWHHIWKLKVAPRIKILVLKLAHGKLPTGAYLYNLNIGSASICHF 185
           Y +L S S N N+ H W  I K K++ + K L+    H  LPT A L++  I +++ C  
Sbjct: 535 YQWLLSLSGNDNNTHSWSWILKKKISEKYKFLIWLACHDSLPTAALLHHRQIIASATCAR 594

Query: 186 CGIHPETDEHLIWNCRIAAICWNVI 260
           CG+  E+  H I +C  + I W+ I
Sbjct: 595 CGVSDESVFHCIRDCPFSKIIWHHI 619


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