BLASTX nr result
ID: Dioscorea21_contig00031934
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00031934 (269 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002451109.1| hypothetical protein SORBIDRAFT_05g024215 [S... 63 3e-08 ref|XP_002454312.1| hypothetical protein SORBIDRAFT_04g028480 [S... 62 5e-08 gb|EEE67720.1| hypothetical protein OsJ_25400 [Oryza sativa Japo... 59 4e-07 gb|EEC82591.1| hypothetical protein OsI_27147 [Oryza sativa Indi... 59 4e-07 gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas... 59 5e-07 >ref|XP_002451109.1| hypothetical protein SORBIDRAFT_05g024215 [Sorghum bicolor] gi|241936952|gb|EES10097.1| hypothetical protein SORBIDRAFT_05g024215 [Sorghum bicolor] Length = 357 Score = 62.8 bits (151), Expect = 3e-08 Identities = 24/66 (36%), Positives = 36/66 (54%) Frame = +3 Query: 54 WHHIWKLKVAPRIKILVLKLAHGKLPTGAYLYNLNIGSASICHFCGIHPETDEHLIWNCR 233 W H+W +K+ +IK+ +LAH LPTG L N N+ + + C CG +T H + C Sbjct: 29 WKHLWSMKIPSKIKVFCWRLAHNSLPTGTILKNKNLAATTNCKICGAEEDTWIHSLLQCN 88 Query: 234 IAAICW 251 I+ W Sbjct: 89 ISKCVW 94 >ref|XP_002454312.1| hypothetical protein SORBIDRAFT_04g028480 [Sorghum bicolor] gi|241934143|gb|EES07288.1| hypothetical protein SORBIDRAFT_04g028480 [Sorghum bicolor] Length = 316 Score = 62.0 bits (149), Expect = 5e-08 Identities = 24/66 (36%), Positives = 36/66 (54%) Frame = +3 Query: 54 WHHIWKLKVAPRIKILVLKLAHGKLPTGAYLYNLNIGSASICHFCGIHPETDEHLIWNCR 233 W H+W +K+ +IK+ +LAH LPTG L N N+ + + C CG +T H + C Sbjct: 29 WKHLWSMKIPSKIKVFCWRLAHNSLPTGTILKNKNLTATANCKICGAEEDTWIHSLLQCN 88 Query: 234 IAAICW 251 I+ W Sbjct: 89 ISKCVW 94 >gb|EEE67720.1| hypothetical protein OsJ_25400 [Oryza sativa Japonica Group] Length = 391 Score = 58.9 bits (141), Expect = 4e-07 Identities = 29/85 (34%), Positives = 42/85 (49%) Frame = +3 Query: 3 VYDFLNSESFNLNSWHGWHHIWKLKVAPRIKILVLKLAHGKLPTGAYLYNLNIGSASICH 182 +Y LNS ++W +WK K PR++ LA +LP L NI + +C Sbjct: 211 LYGILNSRPTCCSNWK---FVWKNKAPPRVQFFAWLLAKDRLPMRVNLKKKNITPSDVCE 267 Query: 183 FCGIHPETDEHLIWNCRIAAICWNV 257 C I PET EHL +C +A W++ Sbjct: 268 ICKIAPETAEHLFLHCSVAKAFWDL 292 >gb|EEC82591.1| hypothetical protein OsI_27147 [Oryza sativa Indica Group] Length = 253 Score = 58.9 bits (141), Expect = 4e-07 Identities = 29/85 (34%), Positives = 42/85 (49%) Frame = +3 Query: 3 VYDFLNSESFNLNSWHGWHHIWKLKVAPRIKILVLKLAHGKLPTGAYLYNLNIGSASICH 182 +Y LNS ++W +WK K PR++ LA +LP L NI + +C Sbjct: 73 LYGILNSRPTCCSNWK---FVWKNKAPPRVQFFAWLLAKDRLPMRVNLKKKNITPSDVCE 129 Query: 183 FCGIHPETDEHLIWNCRIAAICWNV 257 C I PET EHL +C +A W++ Sbjct: 130 ICKIAPETAEHLFLHCSVAKAFWDL 154 >gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H [Medicago truncatula] Length = 869 Score = 58.5 bits (140), Expect = 5e-07 Identities = 30/85 (35%), Positives = 46/85 (54%) Frame = +3 Query: 6 YDFLNSESFNLNSWHGWHHIWKLKVAPRIKILVLKLAHGKLPTGAYLYNLNIGSASICHF 185 Y +L S S N N+ H W I K K++ + K L+ H LPT A L++ I +++ C Sbjct: 535 YQWLLSLSGNDNNTHSWSWILKKKISEKYKFLIWLACHDSLPTAALLHHRQIIASATCAR 594 Query: 186 CGIHPETDEHLIWNCRIAAICWNVI 260 CG+ E+ H I +C + I W+ I Sbjct: 595 CGVSDESVFHCIRDCPFSKIIWHHI 619