BLASTX nr result

ID: Dioscorea21_contig00031881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031881
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137093.1| PREDICTED: DNA repair protein REV1-like [Cuc...   152   3e-35
ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit...   151   5e-35
emb|CBI22513.3| unnamed protein product [Vitis vinifera]              151   5e-35
emb|CAN67721.1| hypothetical protein VITISV_006020 [Vitis vinifera]   150   1e-34
gb|ABN48550.1| polymerase ATREV1-630 [Arabidopsis thaliana]           144   7e-33

>ref|XP_004137093.1| PREDICTED: DNA repair protein REV1-like [Cucumis sativus]
          Length = 1155

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/119 (63%), Positives = 88/119 (73%)
 Frame = +2

Query: 35  NNTTTRWKSPFTDFGSYMVEKNRKLRHQXXXXXXXXXXXXXXXXXEGKGVFHGVSIFIDG 214
           N+ ++  KSPF+DFGSYMVEKNRKL +Q                  G  +F GVSIF+DG
Sbjct: 51  NSISSSRKSPFSDFGSYMVEKNRKLHNQFNLDASSASHSGVN---SGNQIFQGVSIFVDG 107

Query: 215 FTIPSSQELKGFMLKHGGRVENYFSREHVTHIICSNLPDSKKRNFRAFSRGLPVVKPAW 391
           FTIPSSQEL+G+MLK+GGR ENYFSR  V+HIICSNLPDSK +N R+FSRGLPVVKP W
Sbjct: 108 FTIPSSQELRGYMLKYGGRFENYFSRRSVSHIICSNLPDSKIKNLRSFSRGLPVVKPTW 166


>ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera]
          Length = 1175

 Score =  151 bits (382), Expect = 5e-35
 Identities = 72/111 (64%), Positives = 84/111 (75%)
 Frame = +2

Query: 59  SPFTDFGSYMVEKNRKLRHQXXXXXXXXXXXXXXXXXEGKGVFHGVSIFIDGFTIPSSQE 238
           SPF+DFGSYMVEKNRKL++Q                  GK +FHGVS+F+DGFTIPSSQE
Sbjct: 61  SPFSDFGSYMVEKNRKLQNQFDAGASSSSHSALS---SGKPIFHGVSVFVDGFTIPSSQE 117

Query: 239 LKGFMLKHGGRVENYFSREHVTHIICSNLPDSKKRNFRAFSRGLPVVKPAW 391
           L+G+M++HGG  ENYFSR  VTHIICSNLPDSK +N R+FS GLPVVKP W
Sbjct: 118 LRGYMMRHGGHFENYFSRHRVTHIICSNLPDSKIKNLRSFSGGLPVVKPTW 168


>emb|CBI22513.3| unnamed protein product [Vitis vinifera]
          Length = 1123

 Score =  151 bits (382), Expect = 5e-35
 Identities = 72/111 (64%), Positives = 84/111 (75%)
 Frame = +2

Query: 59  SPFTDFGSYMVEKNRKLRHQXXXXXXXXXXXXXXXXXEGKGVFHGVSIFIDGFTIPSSQE 238
           SPF+DFGSYMVEKNRKL++Q                  GK +FHGVS+F+DGFTIPSSQE
Sbjct: 61  SPFSDFGSYMVEKNRKLQNQFDAGASSSSHSALS---SGKPIFHGVSVFVDGFTIPSSQE 117

Query: 239 LKGFMLKHGGRVENYFSREHVTHIICSNLPDSKKRNFRAFSRGLPVVKPAW 391
           L+G+M++HGG  ENYFSR  VTHIICSNLPDSK +N R+FS GLPVVKP W
Sbjct: 118 LRGYMMRHGGHFENYFSRHRVTHIICSNLPDSKIKNLRSFSGGLPVVKPTW 168


>emb|CAN67721.1| hypothetical protein VITISV_006020 [Vitis vinifera]
          Length = 500

 Score =  150 bits (378), Expect = 1e-34
 Identities = 73/111 (65%), Positives = 84/111 (75%)
 Frame = +2

Query: 59  SPFTDFGSYMVEKNRKLRHQXXXXXXXXXXXXXXXXXEGKGVFHGVSIFIDGFTIPSSQE 238
           SPF+DFGSYMVEKNRKL++Q                  GK +FHGVS F+DGFTIPSSQE
Sbjct: 61  SPFSDFGSYMVEKNRKLQNQFDAGASSSSHSAXS---SGKPIFHGVSXFVDGFTIPSSQE 117

Query: 239 LKGFMLKHGGRVENYFSREHVTHIICSNLPDSKKRNFRAFSRGLPVVKPAW 391
           L+G+M++HGG  ENYFSR  VTHIICSNLPDSK +N R+FS GLPVVKP W
Sbjct: 118 LRGYMMRHGGHFENYFSRHRVTHIICSNLPDSKIKNLRSFSGGLPVVKPTW 168


>gb|ABN48550.1| polymerase ATREV1-630 [Arabidopsis thaliana]
          Length = 630

 Score =  144 bits (363), Expect = 7e-33
 Identities = 77/141 (54%), Positives = 88/141 (62%), Gaps = 11/141 (7%)
 Frame = +2

Query: 2   RSSKKRGRPAKNNTT-TRW----------KSPFTDFGSYMVEKNRKLRHQXXXXXXXXXX 148
           + SKK   P+   T    W           SPF+DFGSYM  KNRKL++Q          
Sbjct: 19  KKSKKNNNPSNQKTLGAAWGAASSRSSFRSSPFSDFGSYMEVKNRKLQNQFETEASAASR 78

Query: 149 XXXXXXXEGKGVFHGVSIFIDGFTIPSSQELKGFMLKHGGRVENYFSREHVTHIICSNLP 328
                    K +F GVSIF+DGFTIPS QELKG+M+K+GGR ENYFSR  VTHIICSNLP
Sbjct: 79  GVSGSE---KLIFQGVSIFVDGFTIPSHQELKGYMMKYGGRFENYFSRRSVTHIICSNLP 135

Query: 329 DSKKRNFRAFSRGLPVVKPAW 391
           DSK +N R FSRGLPVVKP W
Sbjct: 136 DSKVKNLRTFSRGLPVVKPTW 156


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