BLASTX nr result

ID: Dioscorea21_contig00031869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031869
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi...   295   3e-78
emb|CBI32403.3| unnamed protein product [Vitis vinifera]              295   3e-78
emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]   295   3e-78
ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi...   293   9e-78
gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonic...   291   3e-77

>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Vitis vinifera]
          Length = 891

 Score =  295 bits (755), Expect = 3e-78
 Identities = 134/177 (75%), Positives = 160/177 (90%)
 Frame = -2

Query: 542  FKIDPENVGYYVLLSNMYAKTGDWDGVNDVRSLAKRRHLQKTPGWSSIEVNNKVNVFFTG 363
            F++D +NVGYYVLLSN+YA  G W+GV+ VRSLA+ R L+KTPGWS+IEVN KV+VF+TG
Sbjct: 715  FEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTG 774

Query: 362  NQSHPQYENICKEMVILLAKMKSLGYVPDYSFVLQDVEEDEKEHILSNHSERLAITFGLM 183
            NQSHP+ + I +E+ +L AKMKSLGY+PDYSFVLQDVEEDEKEHIL++HSERLAI FG++
Sbjct: 775  NQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGII 834

Query: 182  NTAPKTSIKIFKNLRVCGDCHNATKFISRITEREITVRDSNRFHHFRDGICSCGDYW 12
            +T PK+ I+IFKNLRVCGDCHNATKFISRIT+REI VRDSNRFHHF+DGICSCGDYW
Sbjct: 835  STPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891


>emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  295 bits (755), Expect = 3e-78
 Identities = 134/177 (75%), Positives = 160/177 (90%)
 Frame = -2

Query: 542  FKIDPENVGYYVLLSNMYAKTGDWDGVNDVRSLAKRRHLQKTPGWSSIEVNNKVNVFFTG 363
            F++D +NVGYYVLLSN+YA  G W+GV+ VRSLA+ R L+KTPGWS+IEVN KV+VF+TG
Sbjct: 482  FEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTG 541

Query: 362  NQSHPQYENICKEMVILLAKMKSLGYVPDYSFVLQDVEEDEKEHILSNHSERLAITFGLM 183
            NQSHP+ + I +E+ +L AKMKSLGY+PDYSFVLQDVEEDEKEHIL++HSERLAI FG++
Sbjct: 542  NQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGII 601

Query: 182  NTAPKTSIKIFKNLRVCGDCHNATKFISRITEREITVRDSNRFHHFRDGICSCGDYW 12
            +T PK+ I+IFKNLRVCGDCHNATKFISRIT+REI VRDSNRFHHF+DGICSCGDYW
Sbjct: 602  STPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658


>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  295 bits (755), Expect = 3e-78
 Identities = 134/177 (75%), Positives = 160/177 (90%)
 Frame = -2

Query: 542  FKIDPENVGYYVLLSNMYAKTGDWDGVNDVRSLAKRRHLQKTPGWSSIEVNNKVNVFFTG 363
            F++D +NVGYYVLLSN+YA  G W+GV+ VRSLA+ R L+KTPGWS+IEVN KV+VF+TG
Sbjct: 715  FEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTG 774

Query: 362  NQSHPQYENICKEMVILLAKMKSLGYVPDYSFVLQDVEEDEKEHILSNHSERLAITFGLM 183
            NQSHP+ + I +E+ +L AKMKSLGY+PDYSFVLQDVEEDEKEHIL++HSERLAI FG++
Sbjct: 775  NQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGII 834

Query: 182  NTAPKTSIKIFKNLRVCGDCHNATKFISRITEREITVRDSNRFHHFRDGICSCGDYW 12
            +T PK+ I+IFKNLRVCGDCHNATKFISRIT+REI VRDSNRFHHF+DGICSCGDYW
Sbjct: 835  STPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891


>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Vitis vinifera]
          Length = 848

 Score =  293 bits (751), Expect = 9e-78
 Identities = 134/177 (75%), Positives = 159/177 (89%)
 Frame = -2

Query: 542  FKIDPENVGYYVLLSNMYAKTGDWDGVNDVRSLAKRRHLQKTPGWSSIEVNNKVNVFFTG 363
            F++D ENVGYYVLLSN+YA  G W+GV+ VRSLA+ R L+KTPGWSSIEVN +V++F+TG
Sbjct: 672  FEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTG 731

Query: 362  NQSHPQYENICKEMVILLAKMKSLGYVPDYSFVLQDVEEDEKEHILSNHSERLAITFGLM 183
            NQSHP+ + I  E+ IL AKMKSLGY+PDYSFVLQDVEEDEKEHIL++HSERLAI FG++
Sbjct: 732  NQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGII 791

Query: 182  NTAPKTSIKIFKNLRVCGDCHNATKFISRITEREITVRDSNRFHHFRDGICSCGDYW 12
            +T PK++I+IFKNLRVCGDCHNATKFISRITEREI VRDS RFHHF++GICSCGDYW
Sbjct: 792  STPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848


>gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
            gi|125586550|gb|EAZ27214.1| hypothetical protein
            OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  291 bits (746), Expect = 3e-77
 Identities = 133/179 (74%), Positives = 160/179 (89%), Gaps = 2/179 (1%)
 Frame = -2

Query: 542  FKIDPENVGYYVLLSNMYAKTGDWDGVNDVRSLAKRRHLQKTPGWSSIEVNNKVNVFFTG 363
            F++DP+NVGYYVL+SNMYAK G WDGV++VRSL +R++LQKTPGWSSIEV   VNVF++G
Sbjct: 570  FELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSG 629

Query: 362  NQS--HPQYENICKEMVILLAKMKSLGYVPDYSFVLQDVEEDEKEHILSNHSERLAITFG 189
            NQ   HPQ+E I +E++ LLAK++SLGYVPDYSFVLQDVEEDEKE IL+NHSERLAI FG
Sbjct: 630  NQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFG 689

Query: 188  LMNTAPKTSIKIFKNLRVCGDCHNATKFISRITEREITVRDSNRFHHFRDGICSCGDYW 12
            ++NT P+T + I+KNLRVCGDCHNATK+IS+ITEREI VRDSNRFHHF+DG CSCGD+W
Sbjct: 690  IINTPPRTPLHIYKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGYCSCGDFW 748


Top