BLASTX nr result

ID: Dioscorea21_contig00031860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031860
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat...    82   4e-14
emb|CAE04244.3| OSJNBa0089N06.5 [Oryza sativa Japonica Group] gi...    80   1e-13
dbj|BAC80112.1| selenium-binding protein-like [Oryza sativa Japo...    80   2e-13
gb|EAZ03673.1| hypothetical protein OsI_25810 [Oryza sativa Indi...    80   2e-13
ref|NP_001059506.1| Os07g0436600 [Oryza sativa Japonica Group] g...    80   2e-13

>ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
           gi|449519310|ref|XP_004166678.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
          Length = 565

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 40/76 (52%), Positives = 54/76 (71%), Gaps = 3/76 (3%)
 Frame = +3

Query: 3   TYPSLLQACSSLG---DGRGVHALILKSGQCGQDVHAQTSLVSFYSSFGDLECARRVFDG 173
           T+PSLL+ C+S G   +G  +H  IL+ G   +D++  TSLV+ Y   G ++CAR+VFDG
Sbjct: 129 TFPSLLKVCASEGKMMEGMALHGSILRCG-VDEDIYVTTSLVNLYGKGGLIDCARKVFDG 187

Query: 174 MPERNVVSWTAMVTGY 221
           M ERNVVSWTAM+ GY
Sbjct: 188 MSERNVVSWTAMIVGY 203


>emb|CAE04244.3| OSJNBa0089N06.5 [Oryza sativa Japonica Group]
           gi|125549842|gb|EAY95664.1| hypothetical protein
           OsI_17530 [Oryza sativa Indica Group]
           gi|215686910|dbj|BAG90780.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 559

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
 Frame = +3

Query: 6   YPSLLQACSS---LGDGRGVHALILKSGQCGQDVHAQTSLVSFYSSFGDLECARRVFDGM 176
           Y SLLQ C S      G+ VH  +  +     D+H  T LV FY+ FGD+  AR+VFDGM
Sbjct: 14  YSSLLQCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAARKVFDGM 73

Query: 177 PERNVVSWTAMVTGYVK 227
           P R+VVSWTAMV+GY +
Sbjct: 74  PHRSVVSWTAMVSGYAR 90


>dbj|BAC80112.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 757

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/82 (52%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = +3

Query: 3   TYPSLLQACSSLGDGRGVHALILKSGQCGQ-DVHAQTSLVSFYSSFGDLECARRVFDGMP 179
           T  S+L AC S   GR +H   LKSG CG  D H  +SLVS Y   G    ARRVFDGM 
Sbjct: 411 TVSSILPACESELRGRELHCFALKSGMCGAGDFHVGSSLVSMYFRVGQPGHARRVFDGME 470

Query: 180 ERNVVSWTAMVTGYVKQREYDD 245
           +RNVVSWTAMV G+ +   ++D
Sbjct: 471 QRNVVSWTAMVGGFTESGMFED 492


>gb|EAZ03673.1| hypothetical protein OsI_25810 [Oryza sativa Indica Group]
          Length = 514

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/82 (52%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = +3

Query: 3   TYPSLLQACSSLGDGRGVHALILKSGQCGQ-DVHAQTSLVSFYSSFGDLECARRVFDGMP 179
           T  S+L AC S   GR +H   LKSG CG  D H  +SLVS Y   G    ARRVFDGM 
Sbjct: 168 TVSSILPACESELRGRELHCFALKSGMCGAGDFHVGSSLVSMYFRVGQPGHARRVFDGME 227

Query: 180 ERNVVSWTAMVTGYVKQREYDD 245
           +RNVVSWTAMV G+ +   ++D
Sbjct: 228 QRNVVSWTAMVGGFTESGMFED 249


>ref|NP_001059506.1| Os07g0436600 [Oryza sativa Japonica Group]
           gi|113611042|dbj|BAF21420.1| Os07g0436600 [Oryza sativa
           Japonica Group] gi|125600027|gb|EAZ39603.1| hypothetical
           protein OsJ_24038 [Oryza sativa Japonica Group]
          Length = 514

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/82 (52%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = +3

Query: 3   TYPSLLQACSSLGDGRGVHALILKSGQCGQ-DVHAQTSLVSFYSSFGDLECARRVFDGMP 179
           T  S+L AC S   GR +H   LKSG CG  D H  +SLVS Y   G    ARRVFDGM 
Sbjct: 168 TVSSILPACESELRGRELHCFALKSGMCGAGDFHVGSSLVSMYFRVGQPGHARRVFDGME 227

Query: 180 ERNVVSWTAMVTGYVKQREYDD 245
           +RNVVSWTAMV G+ +   ++D
Sbjct: 228 QRNVVSWTAMVGGFTESGMFED 249


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