BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031808
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518478.1| pentatricopeptide repeat-containing protein,...   130   8e-29
gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucu...   122   2e-26
ref|XP_002889890.1| pentatricopeptide repeat-containing protein ...   122   4e-26
ref|XP_002316529.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-26
ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   120   1e-25

>ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542323|gb|EEF43865.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 606

 Score =  130 bits (328), Expect = 8e-29
 Identities = 67/123 (54%), Positives = 85/123 (69%), Gaps = 1/123 (0%)
 Frame = -3

Query: 367 DVFTYNTLMNGYCSSMRIEEALNLFEEMRERGVMVNVVTYNVLINHLCKFKCFQEAKELM 188
           DV TYNTL++GYC+  +I++A  LF EMR  G++ + VTYN LIN LCK     +AKELM
Sbjct: 479 DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELM 538

Query: 187 KVMCKKGLIPDSITYTTLITEFCRHCSASEAIELHDYMVLRG-VPVDQHAQNAIKLLIQR 11
           K+M  +GLIPD +TYT LIT F + CS  E IELHDYMVL+G VP  Q  Q  +  L+Q 
Sbjct: 539 KMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQE 598

Query: 10  EGL 2
           E +
Sbjct: 599 ESV 601



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/121 (28%), Positives = 66/121 (54%)
 Frame = -3

Query: 367 DVFTYNTLMNGYCSSMRIEEALNLFEEMRERGVMVNVVTYNVLINHLCKFKCFQEAKELM 188
           D FTY+ ++ G C +  + EA    + + E  ++ +  ++NV+IN+LC+      AK+L+
Sbjct: 340 DQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLL 399

Query: 187 KVMCKKGLIPDSITYTTLITEFCRHCSASEAIELHDYMVLRGVPVDQHAQNAIKLLIQRE 8
             M  +GL+PD +T+ TLI   C+      AI++++ M+  G   +    N++     +E
Sbjct: 400 ANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKE 459

Query: 7   G 5
           G
Sbjct: 460 G 460



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/113 (30%), Positives = 58/113 (51%)
 Frame = -3

Query: 367 DVFTYNTLMNGYCSSMRIEEALNLFEEMRERGVMVNVVTYNVLINHLCKFKCFQEAKELM 188
           +V TY TL++GY     +E A  L +E+ E+G++ N V YN +I+ L      + A  L+
Sbjct: 270 NVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLL 329

Query: 187 KVMCKKGLIPDSITYTTLITEFCRHCSASEAIELHDYMVLRGVPVDQHAQNAI 29
             M  K + PD  TY+ +I   CR+   +EA +    ++   +  D  + N +
Sbjct: 330 SDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVV 382


>gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 653

 Score =  122 bits (307), Expect = 2e-26
 Identities = 64/140 (45%), Positives = 90/140 (64%), Gaps = 5/140 (3%)
 Frame = -3

Query: 418 KTESVDVAR----HVAENTKMDVFTYNTLMNGYCSSMRIEEALNLFEEMRERGVMVNVVT 251
           K  S+D AR     + +N  +D  TYNTL++G+C +  +E+A  LF EM   G +VN+V+
Sbjct: 509 KQGSIDAARLLVDKLQQNGFLDSVTYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVS 568

Query: 250 YNVLINHLCKFKCFQEAKELMKVMCKKGLIPDSITYTTLITEFCRHCSASEAIELHDYMV 71
           YN++IN LCK    Q+A ELM+ M  +G++PD ITYTTLIT F +   +   IELHDYMV
Sbjct: 569 YNIMINFLCKMGLIQQAMELMRAMASQGIVPDLITYTTLITNFVKSYGSDNVIELHDYMV 628

Query: 70  LRG-VPVDQHAQNAIKLLIQ 14
           L+G VP  Q  Q+ +   +Q
Sbjct: 629 LKGAVPDRQTYQSLVSPCLQ 648



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/99 (32%), Positives = 57/99 (57%)
 Frame = -3

Query: 367 DVFTYNTLMNGYCSSMRIEEALNLFEEMRERGVMVNVVTYNVLINHLCKFKCFQEAKELM 188
           D FTY+ L  G C S  + +AL +   + ER ++ +  T+N+LIN++ + +    AK+L+
Sbjct: 391 DEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQLL 450

Query: 187 KVMCKKGLIPDSITYTTLITEFCRHCSASEAIELHDYMV 71
             M  +G+ PD +TY TL+   C+      A++++D  V
Sbjct: 451 SSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTV 489



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/129 (28%), Positives = 67/129 (51%)
 Frame = -3

Query: 388 VAENTKMDVFTYNTLMNGYCSSMRIEEALNLFEEMRERGVMVNVVTYNVLINHLCKFKCF 209
           +    K D+ TY TL+ G+C   +IE A+ ++++  +     N+V YN +++ LCK    
Sbjct: 454 IVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSI 513

Query: 208 QEAKELMKVMCKKGLIPDSITYTTLITEFCRHCSASEAIELHDYMVLRGVPVDQHAQNAI 29
             A+ L+  + + G + DS+TY TL+  FC +    +A  L   M+  G  V+  + N +
Sbjct: 514 DAARLLVDKLQQNGFL-DSVTYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVSYNIM 572

Query: 28  KLLIQREGL 2
              + + GL
Sbjct: 573 INFLCKMGL 581



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/110 (30%), Positives = 55/110 (50%)
 Frame = -3

Query: 358 TYNTLMNGYCSSMRIEEALNLFEEMRERGVMVNVVTYNVLINHLCKFKCFQEAKELMKVM 179
           TY  L++GY     ++ A  L +EM E  ++ + V YN LI  L      +EA  L+  M
Sbjct: 324 TYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDM 383

Query: 178 CKKGLIPDSITYTTLITEFCRHCSASEAIELHDYMVLRGVPVDQHAQNAI 29
             + ++PD  TY+ L    C     ++A+ +H Y+V R +  D +  N +
Sbjct: 384 INRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNIL 433



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
 Frame = -3

Query: 418 KTESVDVARHVAENTKM--------DVFTYNTLMNGYCSSMRIEEALNLFEEMRERGVMV 263
           K   +D+A  +  NT++        ++ TYN ++NG+C   R+E A N+  EM + G+  
Sbjct: 261 KMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDS 320

Query: 262 NVVTYNVLINHLCKFKCFQEAKELMKVMCKKGLIPDSITYTTLITEFCRHCSASEAIELH 83
           N  TY  LI+   +      A  L   M +  LIPD++ Y +LI          EA  L 
Sbjct: 321 NERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLL 380

Query: 82  DYMVLRGVPVDQ 47
             M+ R +  D+
Sbjct: 381 SDMINRRILPDE 392


>ref|XP_002889890.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335732|gb|EFH66149.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 657

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/115 (48%), Positives = 82/115 (71%), Gaps = 2/115 (1%)
 Frame = -3

Query: 367 DVFTYNTLMNGYCSSMRIEEALNLFEEMRERG--VMVNVVTYNVLINHLCKFKCFQEAKE 194
           D  TYNTL+NG      +EEA N+   M+++     V++VTYN+LINHLCKF C+++AKE
Sbjct: 531 DTVTYNTLLNGSLKIGNVEEADNILSRMQKQDGEKSVSLVTYNILINHLCKFGCYEKAKE 590

Query: 193 LMKVMCKKGLIPDSITYTTLITEFCRHCSASEAIELHDYMVLRGVPVDQHAQNAI 29
           ++K+M ++G++PDSITY TLIT F ++    E +ELHDYM+L+GV   +H   +I
Sbjct: 591 VLKIMVERGVVPDSITYGTLITSFSKNRGQEEVVELHDYMILQGVTPHEHIYQSI 645



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/116 (29%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
 Frame = -3

Query: 367 DVFTYNTLMNGYCSSMRIEEALNLFEEMRERGVMVNVVTYNVLINHLCKFKCFQEAKEL- 191
           +V T+N ++  +C   ++ EAL++F  M + G+  NVV++N++I+  CK    + A +L 
Sbjct: 217 NVNTFNLVIYSFCKENKLFEALSVFYRMLKCGIWPNVVSFNMMIDGACKTGDMRFALQLL 276

Query: 190 --MKVMCKKGLIPDSITYTTLITEFCRHCSASEAIELHDYMVLRGVPVDQHAQNAI 29
             M VM    + P+++TY ++I  FC+      A  +   MV  GV  ++    A+
Sbjct: 277 GKMGVMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGEMVKLGVDCNERTYGAL 332


>ref|XP_002316529.1| predicted protein [Populus trichocarpa] gi|222859594|gb|EEE97141.1|
           predicted protein [Populus trichocarpa]
          Length = 678

 Score =  121 bits (303), Expect = 7e-26
 Identities = 63/138 (45%), Positives = 89/138 (64%), Gaps = 5/138 (3%)
 Frame = -3

Query: 406 VDVARHVAENTK----MDVFTYNTLMNGYCSSMRIEEALNLFEEMRERGVMVNVVTYNVL 239
           VDVAR + +  +    +D  TYNTL+NGY +  + ++A  L   M+  G++ +  TYN +
Sbjct: 537 VDVARSLVDVLQRMGLVDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTV 596

Query: 238 INHLCKFKCFQEAKELMKVMCKKGLIPDSITYTTLITEFCRHCSASEAIELHDYMVLRGV 59
           I  LCKF C QEAKELM +M   G++PD+ITY TL+    ++CSA E IELHDYMVL+GV
Sbjct: 597 IKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGV 656

Query: 58  PVDQHA-QNAIKLLIQRE 8
             D+   +N +  L+Q E
Sbjct: 657 VPDKLTYENIVSPLLQEE 674



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/100 (34%), Positives = 58/100 (58%)
 Frame = -3

Query: 370 MDVFTYNTLMNGYCSSMRIEEALNLFEEMRERGVMVNVVTYNVLINHLCKFKCFQEAKEL 191
           +D FT + L  G C +  I  AL    ++ E  ++ +  ++N+LIN LCK   F  A++L
Sbjct: 414 LDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQL 473

Query: 190 MKVMCKKGLIPDSITYTTLITEFCRHCSASEAIELHDYMV 71
           +  M  +GL+PD +T+ TLI   C+  +   A++++D MV
Sbjct: 474 LARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMV 513



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/124 (30%), Positives = 63/124 (50%)
 Frame = -3

Query: 400 VARHVAENTKMDVFTYNTLMNGYCSSMRIEEALNLFEEMRERGVMVNVVTYNVLINHLCK 221
           +AR        DV T+ TL++G+C    IE A+ ++++M +     N++ YN +IN LCK
Sbjct: 474 LARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCK 533

Query: 220 FKCFQEAKELMKVMCKKGLIPDSITYTTLITEFCRHCSASEAIELHDYMVLRGVPVDQHA 41
                 A+ L+ V+ + GL+ D+ITY TLI  +       +A +L   M   G+      
Sbjct: 534 DGLVDVARSLVDVLQRMGLV-DTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSAT 592

Query: 40  QNAI 29
            N +
Sbjct: 593 YNTV 596



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
 Frame = -3

Query: 367 DVFTYNTLMNGYCSSMRIEEALNLFEEMRERGVMVNVVTYNVLINHLCKFKCFQEAKEL- 191
           +V T+N +++  C   +++EAL++F  + + G+  NVVT+N++++  CK      A +L 
Sbjct: 237 NVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLV 296

Query: 190 --MKVMCKKGLIPDSITYTTLITEFCRHCSASEAIELHDYMV 71
             M++M    + P+S+TY +LI  FC+    + A EL + M+
Sbjct: 297 RKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMM 338



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
 Frame = -3

Query: 367 DVFTYNTLMNGYCSSMRIEEALNL---FEEMRERGVMVNVVTYNVLINHLCKFKCFQEAK 197
           +V T+N +++G C    ++ AL L    E M    +  N VTYN LI+  CK      A+
Sbjct: 272 NVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAE 331

Query: 196 ELMKVMCKKGLIPDSITYTTLITEFCRHCSASEAIELHDYMVLRGVPVDQHAQNAIKLLI 17
           EL   M K  + P+  TY T+I  + R     EA+ L D MV RG+  +    N+I   +
Sbjct: 332 ELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWL 391

Query: 16  QREG 5
             EG
Sbjct: 392 YMEG 395


>ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11710, mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/112 (50%), Positives = 78/112 (69%)
 Frame = -3

Query: 382 ENTKMDVFTYNTLMNGYCSSMRIEEALNLFEEMRERGVMVNVVTYNVLINHLCKFKCFQE 203
           +N  +D  TYNTL++G+C +  IE+A  LF EM   G +VN+V+YN++I+ LCK    Q+
Sbjct: 525 QNGFLDPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMIHFLCKMGLIQQ 584

Query: 202 AKELMKVMCKKGLIPDSITYTTLITEFCRHCSASEAIELHDYMVLRGVPVDQ 47
           A ELM+ M  +G+IPD ITYTTLIT F   C + + IELHDYMVL+G   D+
Sbjct: 585 AMELMRAMSSQGIIPDLITYTTLITNFVEICGSKDVIELHDYMVLKGAVPDR 636



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/99 (32%), Positives = 55/99 (55%)
 Frame = -3

Query: 367 DVFTYNTLMNGYCSSMRIEEALNLFEEMRERGVMVNVVTYNVLINHLCKFKCFQEAKELM 188
           D FTY+ L  G C S  + +AL +   + ER ++ +  TYN+LIN++ + +    AK+L+
Sbjct: 391 DEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLL 450

Query: 187 KVMCKKGLIPDSITYTTLITEFCRHCSASEAIELHDYMV 71
             M   G+ PD +TY T +   C+      A++++D  V
Sbjct: 451 SSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKTV 489



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/124 (29%), Positives = 65/124 (52%)
 Frame = -3

Query: 373 KMDVFTYNTLMNGYCSSMRIEEALNLFEEMRERGVMVNVVTYNVLINHLCKFKCFQEAKE 194
           K D+ TY T ++G+C   +IE A+ ++++  +     N+V YN +++ LCK      AK 
Sbjct: 459 KPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIYAAKL 518

Query: 193 LMKVMCKKGLIPDSITYTTLITEFCRHCSASEAIELHDYMVLRGVPVDQHAQNAIKLLIQ 14
           L+  + + G + D +TY TL+  FC +    +A  L   M+  G  V+  + N +   + 
Sbjct: 519 LVDKLQQNGFL-DPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMIHFLC 577

Query: 13  REGL 2
           + GL
Sbjct: 578 KMGL 581



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
 Frame = -3

Query: 418 KTESVDVARHV-AENTKMDVF----TYNTLMNGYCSSMRIEEALNLFEEMRERGVMVNVV 254
           K   ++ A++V  E  K+ ++    TY TL++GY     ++ A  L +EM E  ++ +  
Sbjct: 299 KIRRLESAKNVLGEMIKLGIYFNERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTF 358

Query: 253 TYNVLINHLCKFKCFQEAKELMKVMCKKGLIPDSITYTTLITEFCRHCSASEAIELHDYM 74
            YN LI  L      +EA  L+  M  + ++PD  TY+ L    C     ++A+ +H Y+
Sbjct: 359 VYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYYI 418

Query: 73  VLRGVPVDQHAQNAI 29
           V R +  D    N +
Sbjct: 419 VERSLVRDAFTYNIL 433



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
 Frame = -3

Query: 418 KTESVDVARHVAENTKM--------DVFTYNTLMNGYCSSMRIEEALNLFEEMRERGVMV 263
           K   +D+A  +  NT++        ++  YN ++NG+C   R+E A N+  EM + G+  
Sbjct: 261 KMGEMDLALKLTRNTEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIYF 320

Query: 262 NVVTYNVLINHLCKFKCFQEAKELMKVMCKKGLIPDSITYTTLITEFCRHCSASEAIELH 83
           N  TY  LI+   +      A  L   M +  LIPD+  Y +LI          EA  L 
Sbjct: 321 NERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLL 380

Query: 82  DYMVLRGVPVDQ 47
             M+ R +  D+
Sbjct: 381 SDMINRRILPDE 392