BLASTX nr result

ID: Dioscorea21_contig00031755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031755
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|22354...   226   1e-57
dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]                          220   1e-55
ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding prote...   220   1e-55
ref|XP_004173736.1| PREDICTED: uncharacterized protein LOC101232...   219   2e-55
gb|EEE51791.1| hypothetical protein OsJ_33249 [Oryza sativa Japo...   212   4e-53

>ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|223540530|gb|EEF42097.1|
           topbp1, putative [Ricinus communis]
          Length = 950

 Score =  226 bits (577), Expect = 1e-57
 Identities = 107/139 (76%), Positives = 122/139 (87%)
 Frame = -1

Query: 417 FEGASVFLSRSLVPPEAFDAVHDALRLNGALVFLCCDPSRNAPSEFHVISSLDHEKFEYL 238
           F GA+VF+SR+LVPPE FDA+ DALRLNGA V LCCDPSRN P+++H+ISS DHEKFE L
Sbjct: 7   FRGANVFMSRNLVPPEVFDALLDALRLNGAQVLLCCDPSRNGPNDYHIISSPDHEKFEDL 66

Query: 237 RSKGCKLVGPQCVLYCAKECRTLPNQGYTCCLAMDGVKVLASGFEKDEKVKIELLVTAMG 58
           R+KGC L+GPQCVL CAKE RTLP QG+TCCLAMDGVKVLASGF+ DEKVKIE LVTAMG
Sbjct: 67  RAKGCNLLGPQCVLSCAKEHRTLPKQGFTCCLAMDGVKVLASGFDIDEKVKIEKLVTAMG 126

Query: 57  GELHTKPSLDIDFVVAKNV 1
           G+LHTK SLD+ FV+ KNV
Sbjct: 127 GQLHTKTSLDVSFVIVKNV 145


>dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]
          Length = 918

 Score =  220 bits (561), Expect = 1e-55
 Identities = 103/144 (71%), Positives = 121/144 (84%)
 Frame = -1

Query: 432 MRPAVFEGASVFLSRSLVPPEAFDAVHDALRLNGALVFLCCDPSRNAPSEFHVISSLDHE 253
           ++   F GA+VF+SR+LVPPE FDA+ DAL+ NGA VFLCCDPSRN P+++H+ISS DHE
Sbjct: 2   LKTKTFNGANVFMSRNLVPPEVFDALLDALKHNGAEVFLCCDPSRNGPNDYHIISSPDHE 61

Query: 252 KFEYLRSKGCKLVGPQCVLYCAKECRTLPNQGYTCCLAMDGVKVLASGFEKDEKVKIELL 73
           KFE LR+KGC L+GPQCV  CAKE R LP QG+TCCLAMDGVK+LASGFE DEKVKIE L
Sbjct: 62  KFEDLRAKGCTLLGPQCVFSCAKEHRALPKQGFTCCLAMDGVKILASGFEVDEKVKIEKL 121

Query: 72  VTAMGGELHTKPSLDIDFVVAKNV 1
           VTAMGG+LHTK S D+ FV+ KNV
Sbjct: 122 VTAMGGQLHTKASSDVSFVIVKNV 145


>ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding protein 1-B-like [Vitis
           vinifera]
          Length = 962

 Score =  220 bits (560), Expect = 1e-55
 Identities = 103/138 (74%), Positives = 120/138 (86%)
 Frame = -1

Query: 414 EGASVFLSRSLVPPEAFDAVHDALRLNGALVFLCCDPSRNAPSEFHVISSLDHEKFEYLR 235
           +GA+VF+SR+LVPPE FD++HDAL+LNGA VFLCCDPSRN P+++H+ISS DHEKFE LR
Sbjct: 8   KGANVFMSRNLVPPELFDSLHDALKLNGADVFLCCDPSRNGPNDYHIISSSDHEKFEDLR 67

Query: 234 SKGCKLVGPQCVLYCAKECRTLPNQGYTCCLAMDGVKVLASGFEKDEKVKIELLVTAMGG 55
           +KGC L+GPQCVL CAKE R LP QG+TCCLAMDGVKVLASGF+ DEKVKI  LVTAMGG
Sbjct: 68  AKGCNLLGPQCVLSCAKEHRPLPKQGFTCCLAMDGVKVLASGFDMDEKVKIGKLVTAMGG 127

Query: 54  ELHTKPSLDIDFVVAKNV 1
            LHTK S D+ FV+ KNV
Sbjct: 128 VLHTKASSDVSFVIVKNV 145


>ref|XP_004173736.1| PREDICTED: uncharacterized protein LOC101232490 [Cucumis sativus]
          Length = 270

 Score =  219 bits (558), Expect = 2e-55
 Identities = 102/143 (71%), Positives = 123/143 (86%)
 Frame = -1

Query: 432 MRPAVFEGASVFLSRSLVPPEAFDAVHDALRLNGALVFLCCDPSRNAPSEFHVISSLDHE 253
           ++P  F GA+VF+SR+LV PE FDA+HDAL+ NGA VFLCCDPS+NAP+++HVISS DH 
Sbjct: 2   LKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSADHA 61

Query: 252 KFEYLRSKGCKLVGPQCVLYCAKECRTLPNQGYTCCLAMDGVKVLASGFEKDEKVKIELL 73
           KFE LR+KGC L+GPQCV+ CAKE R LP QGYTCCLAMDGVK+LASGF++DEKV+I  L
Sbjct: 62  KFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAMDGVKILASGFQEDEKVEIGKL 121

Query: 72  VTAMGGELHTKPSLDIDFVVAKN 4
           V+AMGG LHTK SLD+ FV+AKN
Sbjct: 122 VSAMGGVLHTKASLDVSFVIAKN 144


>gb|EEE51791.1| hypothetical protein OsJ_33249 [Oryza sativa Japonica Group]
          Length = 860

 Score =  212 bits (539), Expect = 4e-53
 Identities = 104/146 (71%), Positives = 115/146 (78%)
 Frame = -1

Query: 438 ASMRPAVFEGASVFLSRSLVPPEAFDAVHDALRLNGALVFLCCDPSRNAPSEFHVISSLD 259
           A  R A F GASVFLSRSLV PE +DAVHDALRLNGA VFLC DP+R  P +FHVISS  
Sbjct: 18  AGRRAATFAGASVFLSRSLVAPEVYDAVHDALRLNGAEVFLCADPARTGPLDFHVISSSS 77

Query: 258 HEKFEYLRSKGCKLVGPQCVLYCAKECRTLPNQGYTCCLAMDGVKVLASGFEKDEKVKIE 79
           HE+F  LR+KGC L+GPQC+L CAKE R LP QGYTCCLAMDGVK+L SGFEKDEK KIE
Sbjct: 78  HERFADLRAKGCNLLGPQCILSCAKEHRFLPKQGYTCCLAMDGVKILCSGFEKDEKAKIE 137

Query: 78  LLVTAMGGELHTKPSLDIDFVVAKNV 1
            LVTAMGG L  K   D +FV+AK+V
Sbjct: 138 QLVTAMGGTLQNKAYTDANFVIAKDV 163


Top