BLASTX nr result
ID: Dioscorea21_contig00031754
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00031754
(349 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containi... 91 8e-17
gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygr... 89 4e-16
ref|XP_001764438.1| predicted protein [Physcomitrella patens sub... 88 6e-16
ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group] g... 88 8e-16
gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indi... 88 8e-16
>ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 91.3 bits (225), Expect = 8e-17
Identities = 43/112 (38%), Positives = 69/112 (61%)
Frame = -3
Query: 347 ALEEMYGNVCEIGDARRVFEIMPSRNLASWNAIVLAVGESGDFMESFRLFKRMRYEGFEP 168
A+ +M+ + DARR+FE MP R+LASW A++ +G+ +E+ LF++MR EG P
Sbjct: 172 AVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMP 231
Query: 167 DFVSILGVLRLCVDLNSLEMGRLVHLLAILSNLSGDLSVNTALLMMYCKLGD 12
D V + +L C L ++++G + + A+ S DL V+ A++ MYCK GD
Sbjct: 232 DSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGD 283
Score = 72.8 bits (177), Expect = 3e-11
Identities = 35/115 (30%), Positives = 63/115 (54%)
Frame = -3
Query: 347 ALEEMYGNVCEIGDARRVFEIMPSRNLASWNAIVLAVGESGDFMESFRLFKRMRYEGFEP 168
AL MY N I +A +FE +++ WN++++ GDF +F F+R+ P
Sbjct: 374 ALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRP 433
Query: 167 DFVSILGVLRLCVDLNSLEMGRLVHLLAILSNLSGDLSVNTALLMMYCKLGDLEM 3
+F++++ +L +C + +L G+ +H S L ++SV +L+ MY K G LE+
Sbjct: 434 NFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLEL 488
>gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 89.0 bits (219), Expect = 4e-16
Identities = 44/113 (38%), Positives = 67/113 (59%)
Frame = -3
Query: 347 ALEEMYGNVCEIGDARRVFEIMPSRNLASWNAIVLAVGESGDFMESFRLFKRMRYEGFEP 168
+L MY ++ A +VF M +RN+ SWN ++ +SGD + F L M+ EGF+P
Sbjct: 457 SLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQP 516
Query: 167 DFVSILGVLRLCVDLNSLEMGRLVHLLAILSNLSGDLSVNTALLMMYCKLGDL 9
D V+I+ +L C L++LE G+LVH A+ L D V T+L+ MY K G++
Sbjct: 517 DRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEV 569
Score = 69.7 bits (169), Expect = 2e-10
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Frame = -3
Query: 347 ALEEMYGNVCEIGDARRVFEIMPSRNLASWNAIVLAVGESG-----DFMESFRLFKRMRY 183
AL MY I DAR F+ M R++ SW+A++ +SG E F+L +RMR
Sbjct: 320 ALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRR 379
Query: 182 EGFEPDFVSILGVLRLCVDLNSLEMGRLVHLLAILSNLSGDLSVNTALLMMYCKLGDL 9
EG P+ V+ + +L+ C +LE GR +H D S+ TA+ MY K G +
Sbjct: 380 EGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSI 437
Score = 68.2 bits (165), Expect = 7e-10
Identities = 38/109 (34%), Positives = 55/109 (50%)
Frame = -3
Query: 347 ALEEMYGNVCEIGDARRVFEIMPSRNLASWNAIVLAVGESGDFMESFRLFKRMRYEGFEP 168
AL MY EI A +F+ M RN+ SW AI+ A + E+F L+++M G P
Sbjct: 219 ALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISP 278
Query: 167 DFVSILGVLRLCVDLNSLEMGRLVHLLAILSNLSGDLSVNTALLMMYCK 21
+ V+ + +L C +L GR +H L D+ V AL+ MYCK
Sbjct: 279 NAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCK 327
Score = 67.8 bits (164), Expect = 9e-10
Identities = 31/115 (26%), Positives = 63/115 (54%)
Frame = -3
Query: 347 ALEEMYGNVCEIGDARRVFEIMPSRNLASWNAIVLAVGESGDFMESFRLFKRMRYEGFEP 168
+L Y ++ +VF M R++ +W++++ A + ++F F+RM+ EP
Sbjct: 118 SLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEP 177
Query: 167 DFVSILGVLRLCVDLNSLEMGRLVHLLAILSNLSGDLSVNTALLMMYCKLGDLEM 3
+ ++ L +L+ C + + LE R +H + S + D++V TAL+ MY K G++ +
Sbjct: 178 NRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISL 232
>ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella
patens] gi|162684302|gb|EDQ70705.1| predicted protein
[Physcomitrella patens subsp. patens]
Length = 868
Score = 88.2 bits (217), Expect = 6e-16
Identities = 42/109 (38%), Positives = 64/109 (58%)
Frame = -3
Query: 335 MYGNVCEIGDARRVFEIMPSRNLASWNAIVLAVGESGDFMESFRLFKRMRYEGFEPDFVS 156
MY ++ A +VF MP+RN+ SWN ++ ++GD ++ F L M+ EGF+PD V+
Sbjct: 439 MYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVT 498
Query: 155 ILGVLRLCVDLNSLEMGRLVHLLAILSNLSGDLSVNTALLMMYCKLGDL 9
++ +L C L LE G+LVH A+ L D V T+L+ MY K G +
Sbjct: 499 VITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQV 547
Score = 71.2 bits (173), Expect = 8e-11
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
Frame = -3
Query: 347 ALEEMYGNVCEIGDARRVFEIMPSRNLASWNAIVLAVGESG-----DFMESFRLFKRMRY 183
AL MY + +AR +F+ M R++ SW+A++ +SG E F+L +RMR
Sbjct: 298 ALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRR 357
Query: 182 EGFEPDFVSILGVLRLCVDLNSLEMGRLVHLLAILSNLSGDLSVNTALLMMYCKLGDL 9
EG P+ V+ + +LR C +LE GR +H D S+ TA+ MY K G +
Sbjct: 358 EGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSI 415
Score = 68.9 bits (167), Expect = 4e-10
Identities = 39/114 (34%), Positives = 56/114 (49%)
Frame = -3
Query: 347 ALEEMYGNVCEIGDARRVFEIMPSRNLASWNAIVLAVGESGDFMESFRLFKRMRYEGFEP 168
AL MY EI A VF M RN+ SW AI+ A + E+F L+++M G P
Sbjct: 197 ALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISP 256
Query: 167 DFVSILGVLRLCVDLNSLEMGRLVHLLAILSNLSGDLSVNTALLMMYCKLGDLE 6
+ V+ + +L C +L GR +H L D+ V AL+ MYCK ++
Sbjct: 257 NAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQ 310
Score = 68.2 bits (165), Expect = 7e-10
Identities = 32/115 (27%), Positives = 63/115 (54%)
Frame = -3
Query: 347 ALEEMYGNVCEIGDARRVFEIMPSRNLASWNAIVLAVGESGDFMESFRLFKRMRYEGFEP 168
+L Y ++ A +VF M R++ +W++++ A + ++F F+RM EP
Sbjct: 96 SLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEP 155
Query: 167 DFVSILGVLRLCVDLNSLEMGRLVHLLAILSNLSGDLSVNTALLMMYCKLGDLEM 3
+ ++ L +L+ C + + LE GR +H + + D++V TAL+ MY K G++ +
Sbjct: 156 NRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISV 210
Score = 57.0 bits (136), Expect = 2e-06
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = -3
Query: 335 MYGNVCEIGDARRVFEIMPSRNLASWNAIVLAVGESGDFMESFRLFKRMRYEGFEPDFVS 156
MY ++ +AR VF+ M +R+ +WNA++ G+ GD +E+ LFKRM E P+ ++
Sbjct: 540 MYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEIT 599
Query: 155 ILGVLRLCVDLNSLEMGR 102
+ V+ C ++ GR
Sbjct: 600 LTAVISACSRAGLVQEGR 617
>ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide
(PPR) repeat-containing protein [Oryza sativa Japonica
Group] gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza
sativa Japonica Group] gi|125582482|gb|EAZ23413.1|
hypothetical protein OsJ_07107 [Oryza sativa Japonica
Group] gi|215712305|dbj|BAG94432.1| unnamed protein
product [Oryza sativa Japonica Group]
Length = 586
Score = 87.8 bits (216), Expect = 8e-16
Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 3/112 (2%)
Frame = -3
Query: 332 YGNVCEIGDARRVFEIMPSRNLASWNAIVLAVGESGDFMESFRLFKRMRYEGFEPDFVSI 153
YG ++G AR VF MP RNL SW+A+V A +G+F E+ +F RM E F PD V +
Sbjct: 155 YGKGGDLGAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVL 214
Query: 152 LGVLRLCVDLNSLEMGRLVHLLAILSNLS---GDLSVNTALLMMYCKLGDLE 6
+ VL+ C L ++E GR VH + G+L + TAL+ MYCK G +E
Sbjct: 215 VSVLKACAHLGAVERGRWVHRYLETGSFGGRRGNLMLETALVDMYCKCGCME 266
>gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indica Group]
Length = 629
Score = 87.8 bits (216), Expect = 8e-16
Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 3/112 (2%)
Frame = -3
Query: 332 YGNVCEIGDARRVFEIMPSRNLASWNAIVLAVGESGDFMESFRLFKRMRYEGFEPDFVSI 153
YG ++G AR VF MP RNL SW+A+V A +G+F E+ +F RM E F PD V +
Sbjct: 155 YGKGGDLGAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVL 214
Query: 152 LGVLRLCVDLNSLEMGRLVHLLAILSNLS---GDLSVNTALLMMYCKLGDLE 6
+ VL+ C L ++E GR VH + G+L + TAL+ MYCK G +E
Sbjct: 215 VSVLKACAHLGAVERGRWVHRYLETGSFGGRRGNLMLETALVDMYCKCGCME 266