BLASTX nr result

ID: Dioscorea21_contig00031688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031688
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33742.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi...   109   2e-22
emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]   109   2e-22
ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containi...   104   7e-21

>emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  109 bits (273), Expect = 2e-22
 Identities = 47/58 (81%), Positives = 52/58 (89%)
 Frame = -2

Query: 383 LNTEPGMTIQIVKNLRVCGDCHAVTKLVSKITGRKIIVRDANRFHHFENGSCSCRDYW 210
           +NT+PG TI+IVKNLRVC DCH VTKL+SKITGRKI+VRD NRFHHF NGSCSC DYW
Sbjct: 505 INTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 562


>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  109 bits (273), Expect = 2e-22
 Identities = 47/58 (81%), Positives = 52/58 (89%)
 Frame = -2

Query: 383 LNTEPGMTIQIVKNLRVCGDCHAVTKLVSKITGRKIIVRDANRFHHFENGSCSCRDYW 210
           +NT+PG TI+IVKNLRVC DCH VTKL+SKITGRKI+VRD NRFHHF NGSCSC DYW
Sbjct: 571 INTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628


>emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  109 bits (273), Expect = 2e-22
 Identities = 47/58 (81%), Positives = 52/58 (89%)
 Frame = -2

Query: 383 LNTEPGMTIQIVKNLRVCGDCHAVTKLVSKITGRKIIVRDANRFHHFENGSCSCRDYW 210
           +NT+PG TI+IVKNLRVC DCH VTKL+SKITGRKI+VRD NRFHHF NGSCSC DYW
Sbjct: 518 INTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 575


>ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|222831850|gb|EEE70327.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  105 bits (261), Expect = 5e-21
 Identities = 44/58 (75%), Positives = 51/58 (87%)
 Frame = -2

Query: 383 LNTEPGMTIQIVKNLRVCGDCHAVTKLVSKITGRKIIVRDANRFHHFENGSCSCRDYW 210
           + T+PG TI+IVKNLRVC DCHAVTKL+SKITGRK+++RD NRFHHF NG CSC DYW
Sbjct: 387 ITTKPGTTIKIVKNLRVCADCHAVTKLISKITGRKVVMRDRNRFHHFVNGLCSCGDYW 444


>ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Glycine max]
          Length = 628

 Score =  104 bits (260), Expect = 7e-21
 Identities = 45/58 (77%), Positives = 52/58 (89%)
 Frame = -2

Query: 383 LNTEPGMTIQIVKNLRVCGDCHAVTKLVSKITGRKIIVRDANRFHHFENGSCSCRDYW 210
           ++T PG  I+IVKNLRVC DCHAV K++SKI+GRKII+RD NRFHHFENGSCSCRDYW
Sbjct: 571 ISTSPGAAIKIVKNLRVCLDCHAVMKIMSKISGRKIIMRDRNRFHHFENGSCSCRDYW 628


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