BLASTX nr result

ID: Dioscorea21_contig00031686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031686
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|2...   152   3e-35
emb|CBI27769.3| unnamed protein product [Vitis vinifera]              151   6e-35
ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   151   6e-35
ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   147   9e-34
ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicag...   146   2e-33

>ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|222862365|gb|EEE99871.1|
           predicted protein [Populus trichocarpa]
          Length = 594

 Score =  152 bits (384), Expect = 3e-35
 Identities = 68/98 (69%), Positives = 83/98 (84%)
 Frame = -1

Query: 295 DAVDFHYSLLSGFCWSANLRATEDQKLKFIGCKVIRLHGNMQHEDRKTSYQSFNSEKSAL 116
           DAVDFHYSLLS FCWS N ++  +   +F+ C  +RLHGNM+ EDR+ ++Q+F +EKSAL
Sbjct: 335 DAVDFHYSLLSEFCWSPNSQSEAEHTERFLRCNTLRLHGNMKQEDRRNTFQAFKTEKSAL 394

Query: 115 LLCTDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRT 2
           LL TD+AARGLDFPKVRCI+QYDSPGEA+EYVHRVGRT
Sbjct: 395 LLSTDIAARGLDFPKVRCIVQYDSPGEATEYVHRVGRT 432


>emb|CBI27769.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  151 bits (381), Expect = 6e-35
 Identities = 71/98 (72%), Positives = 80/98 (81%)
 Frame = -1

Query: 295 DAVDFHYSLLSGFCWSANLRATEDQKLKFIGCKVIRLHGNMQHEDRKTSYQSFNSEKSAL 116
           DAVDFHYSL S F W ANL    + +  F+  K  +LHGNM+HEDR+T++Q+F  EKSAL
Sbjct: 327 DAVDFHYSLFSAFLWPANLHPETEDRQMFLRFKTFQLHGNMKHEDRRTTFQTFKKEKSAL 386

Query: 115 LLCTDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRT 2
           LL TDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRT
Sbjct: 387 LLSTDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRT 424


>ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 17-like [Vitis
           vinifera]
          Length = 600

 Score =  151 bits (381), Expect = 6e-35
 Identities = 71/98 (72%), Positives = 80/98 (81%)
 Frame = -1

Query: 295 DAVDFHYSLLSGFCWSANLRATEDQKLKFIGCKVIRLHGNMQHEDRKTSYQSFNSEKSAL 116
           DAVDFHYSL S F W ANL    + +  F+  K  +LHGNM+HEDR+T++Q+F  EKSAL
Sbjct: 343 DAVDFHYSLFSAFLWPANLHPETEDRQMFLRFKTFQLHGNMKHEDRRTTFQTFKKEKSAL 402

Query: 115 LLCTDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRT 2
           LL TDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRT
Sbjct: 403 LLSTDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRT 440


>ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           17-like [Glycine max]
          Length = 596

 Score =  147 bits (371), Expect = 9e-34
 Identities = 73/98 (74%), Positives = 84/98 (85%)
 Frame = -1

Query: 295 DAVDFHYSLLSGFCWSANLRATEDQKLKFIGCKVIRLHGNMQHEDRKTSYQSFNSEKSAL 116
           DAVDFHYSLLS F +S+  + TE  +  F+GCK  RLHGNMQ EDR+TS+Q+F +EKSAL
Sbjct: 338 DAVDFHYSLLSEFQFSSYPQ-TEGVRQVFLGCKTFRLHGNMQQEDRRTSFQAFKTEKSAL 396

Query: 115 LLCTDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRT 2
           LL TDV+ARGLDFPKVRCIIQYDSPGEA+EYVHRVGRT
Sbjct: 397 LLSTDVSARGLDFPKVRCIIQYDSPGEATEYVHRVGRT 434


>ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355507445|gb|AES88587.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 613

 Score =  146 bits (369), Expect = 2e-33
 Identities = 68/98 (69%), Positives = 82/98 (83%)
 Frame = -1

Query: 295 DAVDFHYSLLSGFCWSANLRATEDQKLKFIGCKVIRLHGNMQHEDRKTSYQSFNSEKSAL 116
           DAVDFHYSL++ F +S+  +  E  +  F+GCK +RLHGNM+ EDR TS+Q+F +EKSAL
Sbjct: 355 DAVDFHYSLITEFLFSSYPQTEEGNRTMFLGCKTLRLHGNMEQEDRTTSFQAFKTEKSAL 414

Query: 115 LLCTDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRT 2
           LL TDV+ARGLDFP VRCIIQYDSPGEA+EYVHRVGRT
Sbjct: 415 LLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRT 452