BLASTX nr result

ID: Dioscorea21_contig00031669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031669
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003564752.1| PREDICTED: transcription factor MYB1R1-like ...    62   4e-08
ref|XP_003569313.1| PREDICTED: transcription factor MYB1R1-like ...    55   4e-07
dbj|BAJ99046.1| predicted protein [Hordeum vulgare subsp. vulgare]     58   5e-07
gb|EAY74856.1| hypothetical protein OsI_02748 [Oryza sativa Indi...    54   5e-07
ref|XP_002440757.1| hypothetical protein SORBIDRAFT_09g006060 [S...    56   1e-06

>ref|XP_003564752.1| PREDICTED: transcription factor MYB1R1-like [Brachypodium
           distachyon]
          Length = 279

 Score = 61.6 bits (148), Expect(2) = 4e-08
 Identities = 32/49 (65%), Positives = 36/49 (73%), Gaps = 5/49 (10%)
 Frame = +3

Query: 357 RKCSHCGNNGHNSRTCRNPISGVNNCGLRLFGVQLHI-----ASPLKKS 488
           RKCS CG+NGHNSRTC     G+ + GLRLFGVQLH+     ASPLKKS
Sbjct: 3   RKCSSCGHNGHNSRTCSGH-RGMESGGLRLFGVQLHVGSAAAASPLKKS 50



 Score = 20.8 bits (42), Expect(2) = 4e-08
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 244 IARKCSHCG 270
           +ARKCS CG
Sbjct: 1   MARKCSSCG 9


>ref|XP_003569313.1| PREDICTED: transcription factor MYB1R1-like [Brachypodium
           distachyon]
          Length = 288

 Score = 54.7 bits (130), Expect(2) = 4e-07
 Identities = 26/49 (53%), Positives = 30/49 (61%), Gaps = 10/49 (20%)
 Frame = +3

Query: 357 RKCSHCGNNGHNSRTCRNPISGV----------NNCGLRLFGVQLHIAS 473
           RKCSHCGN GHNSRTC +   G              GLRLFGVQ+H+A+
Sbjct: 3   RKCSHCGNYGHNSRTCTSSAGGQREIMLCEGGGGGSGLRLFGVQVHVAA 51



 Score = 24.3 bits (51), Expect(2) = 4e-07
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +1

Query: 244 IARKCSHCG 270
           +ARKCSHCG
Sbjct: 1   MARKCSHCG 9


>dbj|BAJ99046.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 303

 Score = 57.8 bits (138), Expect(2) = 5e-07
 Identities = 29/45 (64%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
 Frame = +3

Query: 357 RKCSHCGNNGHNSRTCRNPISGVNNCGLRLFGVQLHI-ASPLKKS 488
           RKCS CG+NGHNSRTC       +  GLRLFGVQL + A+PLKKS
Sbjct: 3   RKCSSCGHNGHNSRTCSGHRGLESGGGLRLFGVQLQVGAAPLKKS 47



 Score = 20.8 bits (42), Expect(2) = 5e-07
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 244 IARKCSHCG 270
           +ARKCS CG
Sbjct: 1   MARKCSSCG 9


>gb|EAY74856.1| hypothetical protein OsI_02748 [Oryza sativa Indica Group]
          Length = 303

 Score = 54.3 bits (129), Expect(2) = 5e-07
 Identities = 27/53 (50%), Positives = 31/53 (58%), Gaps = 14/53 (26%)
 Frame = +3

Query: 357 RKCSHCGNNGHNSRTCRNPIS--------------GVNNCGLRLFGVQLHIAS 473
           RKCSHCGN GHNSRTC +  S              G    GLRLFGVQ+H+A+
Sbjct: 3   RKCSHCGNYGHNSRTCSSSASAGHRDTTMLCDGGDGGGGSGLRLFGVQVHVAA 55



 Score = 24.3 bits (51), Expect(2) = 5e-07
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +1

Query: 244 IARKCSHCG 270
           +ARKCSHCG
Sbjct: 1   MARKCSHCG 9


>ref|XP_002440757.1| hypothetical protein SORBIDRAFT_09g006060 [Sorghum bicolor]
           gi|241946042|gb|EES19187.1| hypothetical protein
           SORBIDRAFT_09g006060 [Sorghum bicolor]
          Length = 302

 Score = 56.2 bits (134), Expect(2) = 1e-06
 Identities = 32/56 (57%), Positives = 35/56 (62%), Gaps = 13/56 (23%)
 Frame = +3

Query: 357 RKCSHCGNNGHNSRTCR-----------NPISGVNNCG-LRLFGVQLHI-ASPLKK 485
           RKCS CGNNGHNSRTC            N  S   +CG LRLFGVQL + +SPLKK
Sbjct: 3   RKCSSCGNNGHNSRTCSGHRCQVTSISINSTSTTTSCGSLRLFGVQLQVGSSPLKK 58



 Score = 20.8 bits (42), Expect(2) = 1e-06
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 244 IARKCSHCG 270
           +ARKCS CG
Sbjct: 1   MARKCSSCG 9


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