BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031633
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containi...   174   7e-42
ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containi...   147   7e-34
ref|XP_002511318.1| pentatricopeptide repeat-containing protein,...   146   1e-33
emb|CBI14948.3| unnamed protein product [Vitis vinifera]              141   5e-32

>ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  174 bits (441), Expect = 7e-42
 Identities = 82/136 (60%), Positives = 103/136 (75%)
 Frame = -3

Query: 411 ALLLFGRMITSSVSPDKFTFSCALKACSRLKSLAHAREIHSLVLKSGFGSEDFVINSLIH 232
           A+LLF  M  +SV PD+FTF C LK CSRL++L+   +IH+L++K GFGS  FV N+LIH
Sbjct: 108 AILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIH 167

Query: 231 MYATCGEVGTARALFDEMPVKGVVSWNAMFAGYFKAGDWMDVVSLFREMLEASAEFDQVT 52
           MYA CGEV  AR +FDEM  + V +WN+MFAGY K+G+W +VV LF EMLE    FD+VT
Sbjct: 168 MYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVT 227

Query: 51  LISVLTACGRLGELSL 4
           L+SVLTACGRL +L L
Sbjct: 228 LVSVLTACGRLADLEL 243



 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/136 (37%), Positives = 79/136 (58%)
 Frame = -3

Query: 417 ENALLLFGRMITSSVSPDKFTFSCALKACSRLKSLAHAREIHSLVLKSGFGSEDFVINSL 238
           E  + LF  M+   +  D+ T    L AC RL  L     I+  V + G      +I SL
Sbjct: 207 EEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSL 266

Query: 237 IHMYATCGEVGTARALFDEMPVKGVVSWNAMFAGYFKAGDWMDVVSLFREMLEASAEFDQ 58
           + MYA CG+V TAR LFD+M  + VV+W+AM +GY +A    + + LF EM +A+ + ++
Sbjct: 267 VDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNE 326

Query: 57  VTLISVLTACGRLGEL 10
           +T++S+L++C  LG L
Sbjct: 327 ITMVSILSSCAVLGAL 342



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 42/132 (31%), Positives = 66/132 (50%)
 Frame = -3

Query: 411 ALLLFGRMITSSVSPDKFTFSCALKACSRLKSLAHAREIHSLVLKSGFGSEDFVINSLIH 232
           AL LF  M  +++ P++ T    L +C+ L +L   + +H  + K        +  +L+ 
Sbjct: 310 ALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMD 369

Query: 231 MYATCGEVGTARALFDEMPVKGVVSWNAMFAGYFKAGDWMDVVSLFREMLEASAEFDQVT 52
            YA CG V ++  +F +MPVK V+SW  +  G    G     +  F  MLE + E + VT
Sbjct: 370 FYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVT 429

Query: 51  LISVLTACGRLG 16
            I VL+AC   G
Sbjct: 430 FIGVLSACSHAG 441


>ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449524140|ref|XP_004169081.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  166 bits (420), Expect = 2e-39
 Identities = 79/138 (57%), Positives = 102/138 (73%)
 Frame = -3

Query: 417 ENALLLFGRMITSSVSPDKFTFSCALKACSRLKSLAHAREIHSLVLKSGFGSEDFVINSL 238
           +NALLLF +M   SV  DKFTFS  LKACSR+K+L    ++H+L+LKSGF S +FV N+L
Sbjct: 103 DNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTL 162

Query: 237 IHMYATCGEVGTARALFDEMPVKGVVSWNAMFAGYFKAGDWMDVVSLFREMLEASAEFDQ 58
           I MYA CG++G AR +FD MP + +V+WN+M +GY K G W +VV LFR++LE   EFD 
Sbjct: 163 IQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDD 222

Query: 57  VTLISVLTACGRLGELSL 4
           VT+ISVL ACGRL  L +
Sbjct: 223 VTMISVLMACGRLANLEI 240



 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/134 (36%), Positives = 76/134 (56%)
 Frame = -3

Query: 417 ENALLLFGRMITSSVSPDKFTFSCALKACSRLKSLAHAREIHSLVLKSGFGSEDFVINSL 238
           +  + LF +++   +  D  T    L AC RL +L     I   ++  G    + +  SL
Sbjct: 204 DEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSL 263

Query: 237 IHMYATCGEVGTARALFDEMPVKGVVSWNAMFAGYFKAGDWMDVVSLFREMLEASAEFDQ 58
           I MYA CG+V TAR LFDEM  + VV+W+AM +GY +A    + ++LF EM + +   ++
Sbjct: 264 IDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNE 323

Query: 57  VTLISVLTACGRLG 16
           VT++SVL +C  LG
Sbjct: 324 VTMVSVLYSCAMLG 337



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/130 (30%), Positives = 60/130 (46%)
 Frame = -3

Query: 417 ENALLLFGRMITSSVSPDKFTFSCALKACSRLKSLAHAREIHSLVLKSGFGSEDFVINSL 238
           + AL LF  M   +V P++ T    L +C+ L +    + +H  + K        +   L
Sbjct: 305 KEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQL 364

Query: 237 IHMYATCGEVGTARALFDEMPVKGVVSWNAMFAGYFKAGDWMDVVSLFREMLEASAEFDQ 58
           I  YA CG +  +  +F EM  K V +W A+  G    G+    +  F  MLE   + + 
Sbjct: 365 IDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPND 424

Query: 57  VTLISVLTAC 28
           VT I VL+AC
Sbjct: 425 VTFIGVLSAC 434


>ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  147 bits (372), Expect = 7e-34
 Identities = 73/139 (52%), Positives = 99/139 (71%), Gaps = 1/139 (0%)
 Frame = -3

Query: 417 ENALLLFGRMIT-SSVSPDKFTFSCALKACSRLKSLAHAREIHSLVLKSGFGSEDFVINS 241
           E+AL LF  M+  ++VSPD+ T +  +K+CSR+  L+  R + +   K GF  + FV+NS
Sbjct: 152 EDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNS 211

Query: 240 LIHMYATCGEVGTARALFDEMPVKGVVSWNAMFAGYFKAGDWMDVVSLFREMLEASAEFD 61
           LIHMYA+CG+V  A  LF  + VKGV++WNAM AGY K GDW +VV +F+ MLE  A FD
Sbjct: 212 LIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFD 271

Query: 60  QVTLISVLTACGRLGELSL 4
           +VTL+SV TACGRLG+ +L
Sbjct: 272 EVTLLSVATACGRLGDANL 290



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 43/131 (32%), Positives = 66/131 (50%)
 Frame = -3

Query: 402 LFGRMITSSVSPDKFTFSCALKACSRLKSLAHAREIHSLVLKSGFGSEDFVINSLIHMYA 223
           +F  M+      D+ T      AC RL      + I     + G      +  +L+ MYA
Sbjct: 259 MFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYA 318

Query: 222 TCGEVGTARALFDEMPVKGVVSWNAMFAGYFKAGDWMDVVSLFREMLEASAEFDQVTLIS 43
            CGE+  AR LFD M  + VV+W+AM +GY ++    + +++F EM       + VT++S
Sbjct: 319 KCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVS 378

Query: 42  VLTACGRLGEL 10
           VL+AC  LG L
Sbjct: 379 VLSACAVLGAL 389



 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 42/128 (32%), Positives = 63/128 (49%)
 Frame = -3

Query: 411 ALLLFGRMITSSVSPDKFTFSCALKACSRLKSLAHAREIHSLVLKSGFGSEDFVINSLIH 232
           AL +F  M  + V+P+  T    L AC+ L +L   + +HS + +        +  +L+ 
Sbjct: 357 ALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVD 416

Query: 231 MYATCGEVGTARALFDEMPVKGVVSWNAMFAGYFKAGDWMDVVSLFREMLEASAEFDQVT 52
            YA CG +  A   F+ MPV+   +W A+  G    G   + + LF  MLEA+ E   VT
Sbjct: 417 FYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVT 476

Query: 51  LISVLTAC 28
            I VL AC
Sbjct: 477 FIGVLLAC 484


>ref|XP_002511318.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550433|gb|EEF51920.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score =  146 bits (369), Expect = 1e-33
 Identities = 68/138 (49%), Positives = 95/138 (68%)
 Frame = -3

Query: 417 ENALLLFGRMITSSVSPDKFTFSCALKACSRLKSLAHAREIHSLVLKSGFGSEDFVINSL 238
           + AL  F +M+  +V+ D+FTF C LKACSRL+     ++IH+ ++K GFGS   V+N+L
Sbjct: 108 QKALAFFKQMLEEAVAFDEFTFPCTLKACSRLRGRKEGKQIHAQIVKYGFGSNCIVLNTL 167

Query: 237 IHMYATCGEVGTARALFDEMPVKGVVSWNAMFAGYFKAGDWMDVVSLFREMLEASAEFDQ 58
           IHMYA CGE+  AR +FD M  + + +WN+MF+GY K+G + D V LF EM E    F+ 
Sbjct: 168 IHMYANCGEIEIARNMFDGMSERDIFAWNSMFSGYVKSGYYEDTVRLFEEMRELGVGFND 227

Query: 57  VTLISVLTACGRLGELSL 4
           +TLISVL ACGRL ++ L
Sbjct: 228 ITLISVLAACGRLADVEL 245



 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 51/136 (37%), Positives = 74/136 (54%)
 Frame = -3

Query: 417 ENALLLFGRMITSSVSPDKFTFSCALKACSRLKSLAHAREIHSLVLKSGFGSEDFVINSL 238
           E+ + LF  M    V  +  T    L AC RL  +     I   V  +G      ++ +L
Sbjct: 209 EDTVRLFEEMRELGVGFNDITLISVLAACGRLADVELGEWIAKYVRVNGLDRNMNLVTAL 268

Query: 237 IHMYATCGEVGTARALFDEMPVKGVVSWNAMFAGYFKAGDWMDVVSLFREMLEASAEFDQ 58
           + MYA CGEV  AR LFD+M  + VV+W+AM +GY +A    + V LF EM  A+ + ++
Sbjct: 269 VDMYAKCGEVDKARRLFDQMDGRDVVAWSAMISGYSQARRCQEAVDLFNEMQMANLDPNE 328

Query: 57  VTLISVLTACGRLGEL 10
           VT++SVL+ C  LG L
Sbjct: 329 VTMVSVLSCCAALGAL 344



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/126 (28%), Positives = 61/126 (48%)
 Frame = -3

Query: 417 ENALLLFGRMITSSVSPDKFTFSCALKACSRLKSLAHAREIHSLVLKSGFGSEDFVINSL 238
           + A+ LF  M  +++ P++ T    L  C+ L +L   + IH  + + G      +  +L
Sbjct: 310 QEAVDLFNEMQMANLDPNEVTMVSVLSCCAALGALGTGKWIHLYIKRKGMNLTVTLGTAL 369

Query: 237 IHMYATCGEVGTARALFDEMPVKGVVSWNAMFAGYFKAGDWMDVVSLFREMLEASAEFDQ 58
           +  Y  CG V +A  +F  MPVK V SW A+  G    G     +  ++ M E++ E + 
Sbjct: 370 VDFYGKCGLVDSAIEVFQLMPVKNVYSWTALIQGLANNGQGKRALEYYQLMRESNVEPND 429

Query: 57  VTLISV 40
           V L+ V
Sbjct: 430 VWLMKV 435


>emb|CBI14948.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score =  141 bits (356), Expect = 5e-32
 Identities = 72/165 (43%), Positives = 101/165 (61%), Gaps = 31/165 (18%)
 Frame = -3

Query: 411 ALLLFGRMITSSVSPDKFTFSCALKACSRLKSLAHAREIHSLVLKSGFGSEDFVINSLIH 232
           A+LLF  M  +SV PD+FTF C LK CSRL++L+   +IH+L++K GFGS  FV N+LIH
Sbjct: 108 AILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIH 167

Query: 231 MYATCGEVGTARALFDEMPVKGVVSWNAMFAGYFKAGDWMDVV----------------- 103
           MYA CGEV  AR +FDEM  + V +WN+MFAGY K+G+W +VV                 
Sbjct: 168 MYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLYVEEKGLKGNPTLIT 227

Query: 102 --------------SLFREMLEASAEFDQVTLISVLTACGRLGEL 10
                          LF EM +A+ + +++T++S+L++C  LG L
Sbjct: 228 SLVDIQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGAL 272