BLASTX nr result

ID: Dioscorea21_contig00031610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031610
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234616.1| ornithine decarboxylase [Solanum lycopersicu...   186   1e-45
sp|P50134.1|DCOR_DATST RecName: Full=Ornithine decarboxylase; Sh...   185   4e-45
gb|AAL83709.1| putative ornithine decarboxylase 1 [Capsicum annuum]   184   6e-45
ref|XP_002300677.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-44
gb|AAB65826.1| ornithine decarboxylase [Nicotiana tabacum]            182   2e-44

>ref|NP_001234616.1| ornithine decarboxylase [Solanum lycopersicum]
           gi|75277325|sp|O22616.2|DCOR_SOLLC RecName:
           Full=Ornithine decarboxylase; Short=ODC; AltName:
           Full=LeODC gi|3668354|gb|AAC61845.1| ornithine
           decarboxylase [Solanum lycopersicum]
           gi|10937976|gb|AAB82301.2| ornithine decarboxylase
           [Solanum lycopersicum]
          Length = 431

 Score =  186 bits (473), Expect = 1e-45
 Identities = 83/138 (60%), Positives = 108/138 (78%)
 Frame = +3

Query: 3   ELEVIAEPGRVFAETASTLATNIVGKRVRGKVREYWINDGIHGSFSCIKNDTATVAMMPL 182
           EL +IAEPGR FAETA TLAT I+GKRVRG+++EYWINDG++GS +C+  D ATV   PL
Sbjct: 291 ELTIIAEPGRFFAETAFTLATTIIGKRVRGELKEYWINDGLYGSMNCVLYDHATVTATPL 350

Query: 183 ACYSSSNNVRCVGKVKYSSTIFGPTCDSMDTIRKEEMLPELELGDWLVSPNMGAYTKSMG 362
           AC S+ NN+ C G   + ST+FGPTCD++DT+ ++  LPEL++ DWL+ PNMGAYTK+ G
Sbjct: 351 ACMSNRNNLNCGGSKTFPSTVFGPTCDALDTVLRDYQLPELQVNDWLIFPNMGAYTKAAG 410

Query: 363 SDFNGFLTSGICVYLGYS 416
           S+FNGF TS I  +L Y+
Sbjct: 411 SNFNGFNTSAIVTHLAYA 428


>sp|P50134.1|DCOR_DATST RecName: Full=Ornithine decarboxylase; Short=ODC
           gi|871008|emb|CAA61121.1| ornithine decarboxylase
           [Datura stramonium]
          Length = 431

 Score =  185 bits (469), Expect = 4e-45
 Identities = 83/138 (60%), Positives = 108/138 (78%)
 Frame = +3

Query: 3   ELEVIAEPGRVFAETASTLATNIVGKRVRGKVREYWINDGIHGSFSCIKNDTATVAMMPL 182
           EL +IAEPGR FAETA TLAT I+GKRVRG++REYWINDG++GS +C+  D ATV   PL
Sbjct: 291 ELTIIAEPGRFFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPL 350

Query: 183 ACYSSSNNVRCVGKVKYSSTIFGPTCDSMDTIRKEEMLPELELGDWLVSPNMGAYTKSMG 362
           AC S+ +N+ C G   + ST+FGPTCD++DT+ ++  LPEL++ DWL+ PNMGAYTK+ G
Sbjct: 351 ACMSNRSNLNCGGSKTFPSTVFGPTCDALDTVLRDYQLPELQVNDWLIFPNMGAYTKAAG 410

Query: 363 SDFNGFLTSGICVYLGYS 416
           S+FNGF TS I  +L Y+
Sbjct: 411 SNFNGFNTSAIVTHLAYA 428


>gb|AAL83709.1| putative ornithine decarboxylase 1 [Capsicum annuum]
          Length = 435

 Score =  184 bits (467), Expect = 6e-45
 Identities = 84/138 (60%), Positives = 106/138 (76%)
 Frame = +3

Query: 3   ELEVIAEPGRVFAETASTLATNIVGKRVRGKVREYWINDGIHGSFSCIKNDTATVAMMPL 182
           EL +IAEPGR FAETA TLAT I+GKRVRG +REYWINDG++GS +C+  D ATV   PL
Sbjct: 295 ELTIIAEPGRFFAETAFTLATTIIGKRVRGDLREYWINDGLYGSMNCVLYDHATVTATPL 354

Query: 183 ACYSSSNNVRCVGKVKYSSTIFGPTCDSMDTIRKEEMLPELELGDWLVSPNMGAYTKSMG 362
           AC S+  N+ C G   + STIFGPTCD++DT+ ++  LPEL++ DWL+ PNMGAYTK+ G
Sbjct: 355 ACMSNRVNLNCSGSKMFPSTIFGPTCDALDTVLRDYQLPELQVNDWLIFPNMGAYTKAAG 414

Query: 363 SDFNGFLTSGICVYLGYS 416
           S+FNGF TS I  +L Y+
Sbjct: 415 SNFNGFNTSAIVTHLAYA 432


>ref|XP_002300677.1| predicted protein [Populus trichocarpa] gi|222842403|gb|EEE79950.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score =  183 bits (465), Expect = 1e-44
 Identities = 84/137 (61%), Positives = 104/137 (75%)
 Frame = +3

Query: 6   LEVIAEPGRVFAETASTLATNIVGKRVRGKVREYWINDGIHGSFSCIKNDTATVAMMPLA 185
           L +I+EPGR FAE+  TLATN++GKRVRG++REYWINDGI+GS +CI ND AT+   PLA
Sbjct: 242 LTIISEPGRFFAESPFTLATNVIGKRVRGELREYWINDGIYGSLNCILNDHATITCTPLA 301

Query: 186 CYSSSNNVRCVGKVKYSSTIFGPTCDSMDTIRKEEMLPELELGDWLVSPNMGAYTKSMGS 365
           C S+S N  C G+  YSS +FGPTCD++DT+     LPEL++ DWLV PNMGAYT + GS
Sbjct: 302 CNSNSANPTCKGEKSYSSMVFGPTCDALDTVLTVHQLPELQVDDWLVFPNMGAYTAAAGS 361

Query: 366 DFNGFLTSGICVYLGYS 416
            FNGF T+ I  YL YS
Sbjct: 362 SFNGFNTAAILTYLSYS 378


>gb|AAB65826.1| ornithine decarboxylase [Nicotiana tabacum]
          Length = 245

 Score =  182 bits (462), Expect = 2e-44
 Identities = 84/138 (60%), Positives = 107/138 (77%)
 Frame = +3

Query: 3   ELEVIAEPGRVFAETASTLATNIVGKRVRGKVREYWINDGIHGSFSCIKNDTATVAMMPL 182
           EL +IAEPGR FAETA TLAT I+GKRVRG++REYWINDG++GS +C+  D ATV   PL
Sbjct: 105 ELTIIAEPGRFFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPL 164

Query: 183 ACYSSSNNVRCVGKVKYSSTIFGPTCDSMDTIRKEEMLPELELGDWLVSPNMGAYTKSMG 362
           A  S+ +NV C G   + +T+FGPTCD++DT+ ++  LPEL++ DWLV PNMGAYTK+ G
Sbjct: 165 AVLSNRSNVTCGGSKTFPTTVFGPTCDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAG 224

Query: 363 SDFNGFLTSGICVYLGYS 416
           S+FNGF TS I  +L YS
Sbjct: 225 SNFNGFNTSAIVTHLAYS 242


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