BLASTX nr result

ID: Dioscorea21_contig00031599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031599
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   143   2e-32
ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   141   5e-32
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              141   5e-32
sp|O48653.2|DPOLA_ORYSJ RecName: Full=DNA polymerase alpha catal...   138   4e-31

>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
            gi|223537171|gb|EEF38804.1| DNA polymerase alpha
            catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  143 bits (360), Expect = 2e-32
 Identities = 71/77 (92%), Positives = 76/77 (98%)
 Frame = -2

Query: 233  LRNASGLKAQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLKGREILQSTVDV 54
            ++NASGLK QQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITL+GREILQSTVD+
Sbjct: 975  MKNASGLKVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDL 1034

Query: 53   VQNHLNLEVIYGDTDSI 3
            VQN+LNLEVIYGDTDSI
Sbjct: 1035 VQNNLNLEVIYGDTDSI 1051


>ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|222853622|gb|EEE91169.1|
           predicted protein [Populus trichocarpa]
          Length = 1312

 Score =  143 bits (360), Expect = 2e-32
 Identities = 71/77 (92%), Positives = 76/77 (98%)
 Frame = -2

Query: 233 LRNASGLKAQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLKGREILQSTVDV 54
           ++NASGLK QQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITL+GREILQSTVD+
Sbjct: 760 MKNASGLKVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDL 819

Query: 53  VQNHLNLEVIYGDTDSI 3
           VQN+LNLEVIYGDTDSI
Sbjct: 820 VQNNLNLEVIYGDTDSI 836


>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
            vinifera]
          Length = 1522

 Score =  141 bits (356), Expect = 5e-32
 Identities = 71/77 (92%), Positives = 75/77 (97%)
 Frame = -2

Query: 233  LRNASGLKAQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLKGREILQSTVDV 54
            L+ ASGLK QQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITL+GREILQSTVD+
Sbjct: 975  LKTASGLKVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDL 1034

Query: 53   VQNHLNLEVIYGDTDSI 3
            VQN+LNLEVIYGDTDSI
Sbjct: 1035 VQNNLNLEVIYGDTDSI 1051


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  141 bits (356), Expect = 5e-32
 Identities = 71/77 (92%), Positives = 75/77 (97%)
 Frame = -2

Query: 233  LRNASGLKAQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLKGREILQSTVDV 54
            L+ ASGLK QQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITL+GREILQSTVD+
Sbjct: 1014 LKTASGLKVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDL 1073

Query: 53   VQNHLNLEVIYGDTDSI 3
            VQN+LNLEVIYGDTDSI
Sbjct: 1074 VQNNLNLEVIYGDTDSI 1090


>sp|O48653.2|DPOLA_ORYSJ RecName: Full=DNA polymerase alpha catalytic subunit
          Length = 1534

 Score =  138 bits (348), Expect = 4e-31
 Identities = 69/77 (89%), Positives = 74/77 (96%)
 Frame = -2

Query: 233  LRNASGLKAQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLKGREILQSTVDV 54
            L+ ASGLK QQ DIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITL+GREILQ+TVD+
Sbjct: 983  LKTASGLKRQQFDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQNTVDL 1042

Query: 53   VQNHLNLEVIYGDTDSI 3
            VQN+LNLEVIYGDTDSI
Sbjct: 1043 VQNNLNLEVIYGDTDSI 1059


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