BLASTX nr result

ID: Dioscorea21_contig00031597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031597
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263321.1| PREDICTED: protoporphyrinogen oxidase, mitoc...   100   9e-20
emb|CAN69962.1| hypothetical protein VITISV_008740 [Vitis vinifera]   100   9e-20
ref|XP_002446710.1| hypothetical protein SORBIDRAFT_06g020950 [S...    99   4e-19
ref|XP_002298607.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|NP_001105004.1| protoporphyrinogen IX oxidase (mitochondrial...    97   2e-18

>ref|XP_002263321.1| PREDICTED: protoporphyrinogen oxidase, mitochondrial [Vitis
           vinifera] gi|296090240|emb|CBI40059.3| unnamed protein
           product [Vitis vinifera]
          Length = 508

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/88 (54%), Positives = 65/88 (73%)
 Frame = -3

Query: 264 CTKIGGDNLKLNSKVLSLACNYEEGSPFSSWSISYAAKHDDLIDNQPYDAVIMTAPLCNV 85
           C ++G D L+L SKVLSL+ ++ E S   +WS++YA+       +  +DAVIMTAPLCNV
Sbjct: 254 CKELGKDKLRLKSKVLSLSYSHGEKSALENWSVAYASNPGKQSKDLSFDAVIMTAPLCNV 313

Query: 84  QDMKFTKIGKPFVLDFIPKVSYLPLSVI 1
           ++MK  K G PF+LDF+P+VSYLPLSVI
Sbjct: 314 REMKIMKKGNPFLLDFLPEVSYLPLSVI 341


>emb|CAN69962.1| hypothetical protein VITISV_008740 [Vitis vinifera]
          Length = 809

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/88 (54%), Positives = 65/88 (73%)
 Frame = -3

Query: 264 CTKIGGDNLKLNSKVLSLACNYEEGSPFSSWSISYAAKHDDLIDNQPYDAVIMTAPLCNV 85
           C ++G D L+L SKVLSL+ ++ E S   +WS++YA+       +  +DAVIMTAPLCNV
Sbjct: 266 CKELGKDKLRLKSKVLSLSYSHGEKSALENWSVAYASNPGKQSKDLSFDAVIMTAPLCNV 325

Query: 84  QDMKFTKIGKPFVLDFIPKVSYLPLSVI 1
           ++MK  K G PF+LDF+P+VSYLPLSVI
Sbjct: 326 REMKIMKKGNPFLLDFLPEVSYLPLSVI 353


>ref|XP_002446710.1| hypothetical protein SORBIDRAFT_06g020950 [Sorghum bicolor]
           gi|241937893|gb|EES11038.1| hypothetical protein
           SORBIDRAFT_06g020950 [Sorghum bicolor]
          Length = 544

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 52/89 (58%), Positives = 63/89 (70%), Gaps = 3/89 (3%)
 Frame = -3

Query: 258 KIGGDNLKLNSKVLSLACNYEEGSPFSSWSISYAAKH---DDLIDNQPYDAVIMTAPLCN 88
           ++G DN+KL ++VLSLAC  +       WSIS  +K     DL  NQ +DAVIMTAPL N
Sbjct: 289 EVGDDNVKLGTEVLSLACTLDGAPAPGGWSISDDSKDASGKDLAKNQTFDAVIMTAPLSN 348

Query: 87  VQDMKFTKIGKPFVLDFIPKVSYLPLSVI 1
           VQ MKFTK G PFVLDF+PKV YLPLS++
Sbjct: 349 VQRMKFTKGGAPFVLDFLPKVDYLPLSLM 377


>ref|XP_002298607.1| predicted protein [Populus trichocarpa] gi|222845865|gb|EEE83412.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/88 (53%), Positives = 63/88 (71%)
 Frame = -3

Query: 264 CTKIGGDNLKLNSKVLSLACNYEEGSPFSSWSISYAAKHDDLIDNQPYDAVIMTAPLCNV 85
           CT++G D +KL SKVLSL+ +Y+  S F +WS+SYA+K         YDAVIMTAPLCNV
Sbjct: 254 CTELGKDGVKLESKVLSLSYSYDGKSTFENWSVSYASKGGKHAQASSYDAVIMTAPLCNV 313

Query: 84  QDMKFTKIGKPFVLDFIPKVSYLPLSVI 1
           +++   K    F LDF+P++SY+PLSVI
Sbjct: 314 KEININKGRNRFSLDFLPQMSYMPLSVI 341


>ref|NP_001105004.1| protoporphyrinogen IX oxidase (mitochondrial)2 [Zea mays]
           gi|9857979|gb|AAG00946.1|AF273767_1 protoporphyrinogen
           IX oxidase [Zea mays]
          Length = 544

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 49/89 (55%), Positives = 63/89 (70%), Gaps = 3/89 (3%)
 Frame = -3

Query: 258 KIGGDNLKLNSKVLSLACNYEEGSPFSSWSISYAAKHD---DLIDNQPYDAVIMTAPLCN 88
           ++G DN+KL ++VLSLAC ++       WSIS  +K     DL  NQ +DAVIMTAPL N
Sbjct: 289 EVGDDNVKLGTEVLSLACTFDGVPALGRWSISVDSKDSGDKDLASNQTFDAVIMTAPLSN 348

Query: 87  VQDMKFTKIGKPFVLDFIPKVSYLPLSVI 1
           V+ MKFTK G P VLDF+PK+ YLPLS++
Sbjct: 349 VRRMKFTKGGAPVVLDFLPKMDYLPLSLM 377


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