BLASTX nr result

ID: Dioscorea21_contig00031591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031591
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533989.1| ring finger protein, putative [Ricinus commu...   182   2e-44
emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]   182   2e-44
emb|CBI36629.3| unnamed protein product [Vitis vinifera]              182   2e-44
ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vit...   182   2e-44
ref|XP_002324500.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41

>ref|XP_002533989.1| ring finger protein, putative [Ricinus communis]
           gi|223526024|gb|EEF28396.1| ring finger protein,
           putative [Ricinus communis]
          Length = 495

 Score =  182 bits (463), Expect = 2e-44
 Identities = 87/109 (79%), Positives = 98/109 (89%), Gaps = 1/109 (0%)
 Frame = -3

Query: 342 DAGVDQSYIDTLPIFLYKAIIGLKDPFDCAVCLCEFEADDKLRLLPKCSHAFHLECIDTW 163
           DAGVDQS+IDTLP+F YKAIIGLK+PFDCAVCLCEFE +DKLRLLPKCSHAFH+ECIDTW
Sbjct: 106 DAGVDQSFIDTLPVFHYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTW 165

Query: 162 LLSHSTCPLCRSSLLPEFSPSCS-SPMLLVLESASESSREPDFERGDVG 19
           LLSHSTCPLCR SLLPEFS + S SP++LVLES SESSRE   +R ++G
Sbjct: 166 LLSHSTCPLCRGSLLPEFSSNSSCSPVVLVLESGSESSREIITDRDNIG 214


>emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]
          Length = 543

 Score =  182 bits (463), Expect = 2e-44
 Identities = 85/100 (85%), Positives = 95/100 (95%), Gaps = 1/100 (1%)
 Frame = -3

Query: 342 DAGVDQSYIDTLPIFLYKAIIGLKDPFDCAVCLCEFEADDKLRLLPKCSHAFHLECIDTW 163
           DAGVDQS+IDTLP+FLYKAIIG K+PFDCAVCLCEFEA+DKLRLLPKCSHAFH+ECIDTW
Sbjct: 146 DAGVDQSFIDTLPVFLYKAIIGAKNPFDCAVCLCEFEAEDKLRLLPKCSHAFHMECIDTW 205

Query: 162 LLSHSTCPLCRSSLLPEFSPS-CSSPMLLVLESASESSRE 46
           LLSHSTCPLCR+SLLP+FSP+   SP++LVLES SESSRE
Sbjct: 206 LLSHSTCPLCRASLLPDFSPNDICSPIVLVLESGSESSRE 245


>emb|CBI36629.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score =  182 bits (462), Expect = 2e-44
 Identities = 85/100 (85%), Positives = 94/100 (94%), Gaps = 1/100 (1%)
 Frame = -3

Query: 342 DAGVDQSYIDTLPIFLYKAIIGLKDPFDCAVCLCEFEADDKLRLLPKCSHAFHLECIDTW 163
           DAGVDQS+IDTLP+FLYKAIIG K+PFDCAVCLCEFEA+DKLRLLPKCSHAFH+ECIDTW
Sbjct: 146 DAGVDQSFIDTLPVFLYKAIIGAKNPFDCAVCLCEFEAEDKLRLLPKCSHAFHMECIDTW 205

Query: 162 LLSHSTCPLCRSSLLPEFSPS-CSSPMLLVLESASESSRE 46
           LLSHSTCPLCR SLLP+FSP+   SP++LVLES SESSRE
Sbjct: 206 LLSHSTCPLCRGSLLPDFSPNDICSPIVLVLESGSESSRE 245


>ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vitis vinifera]
          Length = 543

 Score =  182 bits (462), Expect = 2e-44
 Identities = 85/100 (85%), Positives = 94/100 (94%), Gaps = 1/100 (1%)
 Frame = -3

Query: 342 DAGVDQSYIDTLPIFLYKAIIGLKDPFDCAVCLCEFEADDKLRLLPKCSHAFHLECIDTW 163
           DAGVDQS+IDTLP+FLYKAIIG K+PFDCAVCLCEFEA+DKLRLLPKCSHAFH+ECIDTW
Sbjct: 146 DAGVDQSFIDTLPVFLYKAIIGAKNPFDCAVCLCEFEAEDKLRLLPKCSHAFHMECIDTW 205

Query: 162 LLSHSTCPLCRSSLLPEFSPS-CSSPMLLVLESASESSRE 46
           LLSHSTCPLCR SLLP+FSP+   SP++LVLES SESSRE
Sbjct: 206 LLSHSTCPLCRGSLLPDFSPNDICSPIVLVLESGSESSRE 245


>ref|XP_002324500.1| predicted protein [Populus trichocarpa] gi|222865934|gb|EEF03065.1|
           predicted protein [Populus trichocarpa]
          Length = 468

 Score =  172 bits (435), Expect = 3e-41
 Identities = 83/110 (75%), Positives = 96/110 (87%), Gaps = 2/110 (1%)
 Frame = -3

Query: 342 DAGVDQSYIDTLPIFLYKAIIGLKDPFDCAVCLCEFEADDKLRLLPKCSHAFHLECIDTW 163
           DAGVDQ++ID LP+F YKAIIGLK+PFDCAVCLCEFE +DKLRLLPKCSHAFH+ECIDTW
Sbjct: 102 DAGVDQTFIDALPVFHYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTW 161

Query: 162 LLSHSTCPLCRSSLLPEFSPSCS-SPMLLVLESASESSREPDFER-GDVG 19
           LLSHSTCPLCR+ LL +FSP+ S SP++LVLES  ESSRE   +R  D+G
Sbjct: 162 LLSHSTCPLCRACLLSDFSPNNSCSPIVLVLESGGESSREIVNDREADIG 211


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