BLASTX nr result

ID: Dioscorea21_contig00031586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031586
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containi...   209   1e-52
tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea m...   206   2e-51
ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea ma...   206   2e-51
ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group] g...   203   1e-50
gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sat...   203   1e-50

>ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Brachypodium distachyon]
          Length = 647

 Score =  209 bits (533), Expect = 1e-52
 Identities = 99/135 (73%), Positives = 113/135 (83%)
 Frame = -3

Query: 405 EPGISWVELQGGEVHQFATGGRSHPKQREINRFLGELMSKIREFGYVPDRSMVYHDMEDE 226
           EPG+SWVE +G +VHQF TG +SHP+Q EI+ +L E+M KIR+ GY PD +MV+HDMEDE
Sbjct: 512 EPGVSWVEHKG-QVHQFCTGDKSHPRQGEIDEYLKEMMGKIRQCGYAPDMTMVFHDMEDE 570

Query: 225 EKEFSLAQHSEKLAIAFALLIMPPETPIRVMKNLRVCDDCHVAIKFISRITEREIVVRDV 46
           EKE SL  HSEKLAIAFA L +P   PIRVMKNLRVCDDCHVAIK IS++T REIVVRDV
Sbjct: 571 EKEVSLTHHSEKLAIAFAFLNLPEGVPIRVMKNLRVCDDCHVAIKLISQVTGREIVVRDV 630

Query: 45  SRFHHFRDGECSCGD 1
           SRFHHFRDG CSCGD
Sbjct: 631 SRFHHFRDGRCSCGD 645


>tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
          Length = 647

 Score =  206 bits (523), Expect = 2e-51
 Identities = 97/135 (71%), Positives = 113/135 (83%)
 Frame = -3

Query: 405 EPGISWVELQGGEVHQFATGGRSHPKQREINRFLGELMSKIREFGYVPDRSMVYHDMEDE 226
           EPG+SWVEL+G ++HQF TG  SH +QREI   L E+M++IR+ GY PD SMV+HDMEDE
Sbjct: 512 EPGVSWVELKG-QIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDE 570

Query: 225 EKEFSLAQHSEKLAIAFALLIMPPETPIRVMKNLRVCDDCHVAIKFISRITEREIVVRDV 46
           EKE SLA HSEKLAIAFA L +P   PIRVMKNLRVCDDCHVAIK +S++  REIVVRDV
Sbjct: 571 EKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDV 630

Query: 45  SRFHHFRDGECSCGD 1
           SRFHHF+DG+CSCGD
Sbjct: 631 SRFHHFKDGKCSCGD 645


>ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
           gi|194695290|gb|ACF81729.1| unknown [Zea mays]
          Length = 539

 Score =  206 bits (523), Expect = 2e-51
 Identities = 97/135 (71%), Positives = 113/135 (83%)
 Frame = -3

Query: 405 EPGISWVELQGGEVHQFATGGRSHPKQREINRFLGELMSKIREFGYVPDRSMVYHDMEDE 226
           EPG+SWVEL+G ++HQF TG  SH +QREI   L E+M++IR+ GY PD SMV+HDMEDE
Sbjct: 404 EPGVSWVELKG-QIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDE 462

Query: 225 EKEFSLAQHSEKLAIAFALLIMPPETPIRVMKNLRVCDDCHVAIKFISRITEREIVVRDV 46
           EKE SLA HSEKLAIAFA L +P   PIRVMKNLRVCDDCHVAIK +S++  REIVVRDV
Sbjct: 463 EKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDV 522

Query: 45  SRFHHFRDGECSCGD 1
           SRFHHF+DG+CSCGD
Sbjct: 523 SRFHHFKDGKCSCGD 537


>ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
           gi|113550165|dbj|BAF13608.1| Os03g0816600, partial
           [Oryza sativa Japonica Group]
          Length = 708

 Score =  203 bits (517), Expect = 1e-50
 Identities = 96/135 (71%), Positives = 112/135 (82%)
 Frame = -3

Query: 405 EPGISWVELQGGEVHQFATGGRSHPKQREINRFLGELMSKIREFGYVPDRSMVYHDMEDE 226
           EPG+SWVEL+G  +HQF TG  SHP+Q+EI+  L E+M+KIR+ GY PD SMV HDMEDE
Sbjct: 573 EPGVSWVELKG-HIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDE 631

Query: 225 EKEFSLAQHSEKLAIAFALLIMPPETPIRVMKNLRVCDDCHVAIKFISRITEREIVVRDV 46
           EKE SL+ HSEKLAIAFA L +P   PIRVMKNLRVCDDCH+AIK +S++T REIVVRDV
Sbjct: 632 EKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDV 691

Query: 45  SRFHHFRDGECSCGD 1
           SRFHHF+DG CSC D
Sbjct: 692 SRFHHFKDGRCSCRD 706


>gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group] gi|215697380|dbj|BAG91374.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 646

 Score =  203 bits (517), Expect = 1e-50
 Identities = 96/135 (71%), Positives = 112/135 (82%)
 Frame = -3

Query: 405 EPGISWVELQGGEVHQFATGGRSHPKQREINRFLGELMSKIREFGYVPDRSMVYHDMEDE 226
           EPG+SWVEL+G  +HQF TG  SHP+Q+EI+  L E+M+KIR+ GY PD SMV HDMEDE
Sbjct: 511 EPGVSWVELKG-HIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDE 569

Query: 225 EKEFSLAQHSEKLAIAFALLIMPPETPIRVMKNLRVCDDCHVAIKFISRITEREIVVRDV 46
           EKE SL+ HSEKLAIAFA L +P   PIRVMKNLRVCDDCH+AIK +S++T REIVVRDV
Sbjct: 570 EKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDV 629

Query: 45  SRFHHFRDGECSCGD 1
           SRFHHF+DG CSC D
Sbjct: 630 SRFHHFKDGRCSCRD 644


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