BLASTX nr result

ID: Dioscorea21_contig00031584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031584
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320018.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
emb|CBI19366.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002510054.1| conserved hypothetical protein [Ricinus comm...    60   2e-07

>ref|XP_002320018.1| predicted protein [Populus trichocarpa] gi|222860791|gb|EEE98333.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 46/104 (44%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
 Frame = -1

Query: 418 LSLRPPPCPYDNARFSKPGIYVPLPPCAFQ----PL---PKKPLVLRRDDDPFFAAYMKC 260
           + L+PPPCP +++R S   I +PLPPC FQ    PL    ++ L    DDDPF AAY +C
Sbjct: 39  VKLQPPPCPVESSRISTHDIIIPLPPCTFQAPGAPLRSSSRRGLKKDIDDDPFLAAYKEC 98

Query: 259 T--XXXXXXXXXXXXXXXXGFDI-SCKKSCGVRDDAMIRVSQVP 137
           T                   FD  SCK+SC VRDD ++RVSQVP
Sbjct: 99  TKKDKPVGKDFGSGRRKRAIFDFSSCKQSCSVRDDNLVRVSQVP 142


>emb|CBI19366.3| unnamed protein product [Vitis vinifera]
          Length = 164

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
 Frame = -1

Query: 418 LSLRPPPCPYDNARFSKPGIYVPLPPCAFQPLP----KKPLVLRRDDDPFFAAYMKCT-X 254
           + L+PPPCP +  R S  G  +PLPPC FQ  P     K   LR+ +DPF AAY +CT  
Sbjct: 41  IKLQPPPCPLEKGRPSVHGSQIPLPPCTFQGPPSRNSSKKGHLRKQEDPFLAAYKECTKN 100

Query: 253 XXXXXXXXXXXXXXXGFDISCKKSCGVRDDAMIRVSQV 140
                           F++SCK SC VRDD ++  S++
Sbjct: 101 TRKGHDGKTHLGRSSMFNLSCKHSCNVRDDNLVSKSRL 138


>ref|XP_002510054.1| conserved hypothetical protein [Ricinus communis]
           gi|223550755|gb|EEF52241.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 128

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
 Frame = -1

Query: 445 NPNPNPKQKLSLRPPPCPYDNARFSKPG-IYVPLPPCAFQPLPKKPLV--LRRDDDPFFA 275
           +PN      L L PPPCP ++ R S    I +PLPPC FQP  +      +R+ DDPF A
Sbjct: 31  DPNQEEDLVLKLLPPPCPIESPRISTHDTINIPLPPCTFQPPSRSSSRKGIRKQDDPFLA 90

Query: 274 AYMKCT 257
           AY +CT
Sbjct: 91  AYKECT 96


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