BLASTX nr result

ID: Dioscorea21_contig00031579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031579
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABV72583.1| unknown [Oryza sativa Japonica Group]                  158   4e-37
emb|CCI55442.1| PH01B031C15.25 [Phyllostachys edulis]                 156   2e-36
gb|ABB47665.1| retrotransposon protein, putative, unclassified, ...   156   2e-36
ref|NP_001062653.2| Os09g0244000 [Oryza sativa Japonica Group] g...   155   4e-36
gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]     155   4e-36

>gb|ABV72583.1| unknown [Oryza sativa Japonica Group]
          Length = 392

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/92 (81%), Positives = 84/92 (91%)
 Frame = +2

Query: 2   DLIVRSGLTDSRTAATPMELHVQLRPTDGTPLEDPSRYRHIVGSLVYLTVTRPDIAHVVH 181
           DL+ +SGLTDSRT  TPMELHV+LR TDGTPL+DPSRYRH+VGSLVYLTVTRPDIA+ VH
Sbjct: 271 DLLAQSGLTDSRTTTTPMELHVRLRSTDGTPLDDPSRYRHLVGSLVYLTVTRPDIAYAVH 330

Query: 182 VLSQFVSTPTSVHYGHLLRVLRYLRGTASRRL 277
           +LSQFVS PTSVHYGHLLRVLRYLRGT ++ L
Sbjct: 331 ILSQFVSAPTSVHYGHLLRVLRYLRGTTTQCL 362


>emb|CCI55442.1| PH01B031C15.25 [Phyllostachys edulis]
          Length = 1126

 Score =  156 bits (394), Expect = 2e-36
 Identities = 77/92 (83%), Positives = 81/92 (88%)
 Frame = +2

Query: 2    DLIVRSGLTDSRTAATPMELHVQLRPTDGTPLEDPSRYRHIVGSLVYLTVTRPDIAHVVH 181
            DL+ RSGLTDSRTAATP++LH+QL PTDGT LEDPSRYRHIVGSLVYL VTRPDIAH VH
Sbjct: 932  DLLARSGLTDSRTAATPIKLHLQLHPTDGTLLEDPSRYRHIVGSLVYLAVTRPDIAHSVH 991

Query: 182  VLSQFVSTPTSVHYGHLLRVLRYLRGTASRRL 277
            VLSQFVS P SVHY HLLRVLRYLRGT  R L
Sbjct: 992  VLSQFVSVPMSVHYAHLLRVLRYLRGTVDRCL 1023


>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group] gi|78708691|gb|ABB47666.1|
            retrotransposon protein, putative, unclassified,
            expressed [Oryza sativa Japonica Group]
          Length = 1682

 Score =  156 bits (394), Expect = 2e-36
 Identities = 74/92 (80%), Positives = 83/92 (90%)
 Frame = +2

Query: 2    DLIVRSGLTDSRTAATPMELHVQLRPTDGTPLEDPSRYRHIVGSLVYLTVTRPDIAHVVH 181
            DL+ +SGLTDSRT  TPMELHV+LR TDGTPL+DPSRYRH+VGSLVYLTVTRPDIA+ VH
Sbjct: 1008 DLLAQSGLTDSRTTTTPMELHVRLRSTDGTPLDDPSRYRHLVGSLVYLTVTRPDIAYAVH 1067

Query: 182  VLSQFVSTPTSVHYGHLLRVLRYLRGTASRRL 277
            +LSQFVS P SVHYGHLLRVLRYLRGT ++ L
Sbjct: 1068 ILSQFVSAPISVHYGHLLRVLRYLRGTTTQCL 1099


>ref|NP_001062653.2| Os09g0244000 [Oryza sativa Japonica Group]
            gi|255678704|dbj|BAF24567.2| Os09g0244000 [Oryza sativa
            Japonica Group]
          Length = 1149

 Score =  155 bits (391), Expect = 4e-36
 Identities = 75/92 (81%), Positives = 83/92 (90%)
 Frame = +2

Query: 2    DLIVRSGLTDSRTAATPMELHVQLRPTDGTPLEDPSRYRHIVGSLVYLTVTRPDIAHVVH 181
            DLIVRSG+TD+RT ATPM+LH+QLR TDGTPLEDPS Y HIVGSLVYLTVTR DIAH VH
Sbjct: 892  DLIVRSGITDNRTVATPMDLHLQLRGTDGTPLEDPSHYHHIVGSLVYLTVTRLDIAHAVH 951

Query: 182  VLSQFVSTPTSVHYGHLLRVLRYLRGTASRRL 277
            +LSQFVS PTSVH+GHLLRVLRYLRG +S+ L
Sbjct: 952  ILSQFVSAPTSVHFGHLLRVLRYLRGISSQCL 983


>gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1419

 Score =  155 bits (391), Expect = 4e-36
 Identities = 73/90 (81%), Positives = 80/90 (88%)
 Frame = +2

Query: 2    DLIVRSGLTDSRTAATPMELHVQLRPTDGTPLEDPSRYRHIVGSLVYLTVTRPDIAHVVH 181
            DL+ RSGL+D +TAATPMELH+++RPTDG PL DPSRYRHIVGSLVYL VTRPDI+H VH
Sbjct: 1161 DLLSRSGLSDDKTAATPMELHLKIRPTDGNPLSDPSRYRHIVGSLVYLAVTRPDISHAVH 1220

Query: 182  VLSQFVSTPTSVHYGHLLRVLRYLRGTASR 271
            VLSQF S PTSVHY HLLRVLRYLRGT SR
Sbjct: 1221 VLSQFTSAPTSVHYAHLLRVLRYLRGTPSR 1250


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