BLASTX nr result

ID: Dioscorea21_contig00031546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031546
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica G...   117   1e-24
ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group] g...   117   1e-24
gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indi...   117   1e-24
ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containi...   112   2e-23
ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22

>dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
           gi|125570436|gb|EAZ11951.1| hypothetical protein
           OsJ_01824 [Oryza sativa Japonica Group]
          Length = 735

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/110 (53%), Positives = 73/110 (66%)
 Frame = -3

Query: 438 SAYILLSNIYAARNKWDDVERVRRKMRERGVNKDPGCSWIEFKSGVHVFVSRELLHPQIK 259
           SAYILLSNIYA++ KW+DVERVR  MR RGVNKDPGCSW+E  S VHVFV  E  HP+ +
Sbjct: 626 SAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAE 685

Query: 258 EIQEQVRSLTKHMRLEGYHPCLQLHSFPEDSIQEQVTEEEEFQLIESCVS 109
            I  Q+R L KHM+ EGYH   +L    E     +  EE++ + I +  S
Sbjct: 686 NINAQLRRLAKHMKDEGYHSSSKLSFDEELGPLAESHEEDQLEWISAAYS 735


>ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
           gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/110 (53%), Positives = 73/110 (66%)
 Frame = -3

Query: 438 SAYILLSNIYAARNKWDDVERVRRKMRERGVNKDPGCSWIEFKSGVHVFVSRELLHPQIK 259
           SAYILLSNIYA++ KW+DVERVR  MR RGVNKDPGCSW+E  S VHVFV  E  HP+ +
Sbjct: 520 SAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAE 579

Query: 258 EIQEQVRSLTKHMRLEGYHPCLQLHSFPEDSIQEQVTEEEEFQLIESCVS 109
            I  Q+R L KHM+ EGYH   +L    E     +  EE++ + I +  S
Sbjct: 580 NINAQLRRLAKHMKDEGYHSSSKLSFDEELGPLAESHEEDQLEWISAAYS 629


>gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
          Length = 735

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/110 (53%), Positives = 73/110 (66%)
 Frame = -3

Query: 438 SAYILLSNIYAARNKWDDVERVRRKMRERGVNKDPGCSWIEFKSGVHVFVSRELLHPQIK 259
           SAYILLSNIYA++ KW+DVERVR  MR RGVNKDPGCSW+E  S VHVFV  E  HP+ +
Sbjct: 626 SAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAE 685

Query: 258 EIQEQVRSLTKHMRLEGYHPCLQLHSFPEDSIQEQVTEEEEFQLIESCVS 109
            I  Q+R L KHM+ EGYH   +L    E     +  EE++ + I +  S
Sbjct: 686 NINAQLRRLAKHMKDEGYHSSSKLSFDEELGPLAESHEEDQLEWISAAYS 735


>ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera] gi|302141693|emb|CBI18896.3| unnamed
           protein product [Vitis vinifera]
          Length = 703

 Score =  112 bits (281), Expect = 2e-23
 Identities = 50/80 (62%), Positives = 66/80 (82%)
 Frame = -3

Query: 438 SAYILLSNIYAARNKWDDVERVRRKMRERGVNKDPGCSWIEFKSGVHVFVSRELLHPQIK 259
           SAY+LLS+IY+A  +W+DVERVRR M+ RGV+K+PGCSWIE KSGVHVFV ++ +HPQI 
Sbjct: 615 SAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIG 674

Query: 258 EIQEQVRSLTKHMRLEGYHP 199
           +I  ++R L+K M+ EGY P
Sbjct: 675 DIHVELRQLSKQMKDEGYEP 694


>ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  110 bits (275), Expect = 1e-22
 Identities = 55/106 (51%), Positives = 74/106 (69%)
 Frame = -3

Query: 438 SAYILLSNIYAARNKWDDVERVRRKMRERGVNKDPGCSWIEFKSGVHVFVSRELLHPQIK 259
           SAY+LLS+IY A  KW+DVERVR  M+ RGV K+PGCSWIE KS  HVFV  + +HPQI 
Sbjct: 625 SAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIELKSLTHVFVVGDNMHPQID 684

Query: 258 EIQEQVRSLTKHMRLEGYHPCLQLHSFPEDSIQEQVTEEEEFQLIE 121
           EI+  ++ LTK M+ EGY P L   S P ++I + + ++E+   I+
Sbjct: 685 EIRLGLKLLTKLMKDEGYQPLLD--SLPPETISDDLKDQEDSHEIQ 728


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