BLASTX nr result
ID: Dioscorea21_contig00031534
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00031534 (402 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containi... 149 2e-34 emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera] 149 2e-34 ref|XP_002512558.1| pentatricopeptide repeat-containing protein,... 117 7e-25 ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containi... 114 6e-24 ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|2... 114 6e-24 >ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420, mitochondrial [Vitis vinifera] gi|296088528|emb|CBI37519.3| unnamed protein product [Vitis vinifera] Length = 525 Score = 149 bits (376), Expect = 2e-34 Identities = 67/111 (60%), Positives = 88/111 (79%) Frame = -1 Query: 333 SASADALARLLIQHHNPFHAMESSLQLAGVGLTHDLVLQTLLRLKNASKVALGFFLWARD 154 S AD ++++L+QHHNPFHAMESSLQL G+ L+ LV QTLLRL+N SK+AL FFLWA+D Sbjct: 50 SYDADLISKILLQHHNPFHAMESSLQLNGIALSTHLVHQTLLRLRNVSKIALSFFLWAKD 109 Query: 153 HAHHLHNADAYDLMVDILGRVRQFDVVWQLIVEMDQRGVVPSPRTFAVLVR 1 AHH H+ +Y+L++DIL +VRQFDV WQ I+EMDQ + P+ TF +L+R Sbjct: 110 QAHHSHDVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIR 160 >emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera] Length = 525 Score = 149 bits (376), Expect = 2e-34 Identities = 67/111 (60%), Positives = 88/111 (79%) Frame = -1 Query: 333 SASADALARLLIQHHNPFHAMESSLQLAGVGLTHDLVLQTLLRLKNASKVALGFFLWARD 154 S AD ++++L+QHHNPFHAMESSLQL G+ L+ LV QTLLRL+N SK+AL FFLWA+D Sbjct: 50 SYDADLISKILLQHHNPFHAMESSLQLNGIALSTHLVHQTLLRLRNVSKIALSFFLWAKD 109 Query: 153 HAHHLHNADAYDLMVDILGRVRQFDVVWQLIVEMDQRGVVPSPRTFAVLVR 1 AHH H+ +Y+L++DIL +VRQFDV WQ I+EMDQ + P+ TF +L+R Sbjct: 110 QAHHSHDVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIR 160 >ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223548519|gb|EEF50010.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 511 Score = 117 bits (294), Expect = 7e-25 Identities = 56/111 (50%), Positives = 79/111 (71%) Frame = -1 Query: 333 SASADALARLLIQHHNPFHAMESSLQLAGVGLTHDLVLQTLLRLKNASKVALGFFLWARD 154 S A+ ++ +L+ HHNPFHAMESSLQL G+ L+ L+ QTLLRL++ SK+AL FF ++ Sbjct: 36 SNDAEIVSEILLNHHNPFHAMESSLQLHGITLSSSLLHQTLLRLRHNSKIALSFFHYSLS 95 Query: 153 HAHHLHNADAYDLMVDILGRVRQFDVVWQLIVEMDQRGVVPSPRTFAVLVR 1 N Y+L++DIL +VRQFDV WQLI++MDQ + P+ TF +L+R Sbjct: 96 LPSSSVNTTTYNLIIDILSKVRQFDVSWQLIIQMDQNNLQPNSHTFLILIR 146 >ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like [Glycine max] Length = 510 Score = 114 bits (286), Expect = 6e-24 Identities = 57/111 (51%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Frame = -1 Query: 330 ASADALARLLIQHHNPFHAMESSLQLAGVGLTHDLVLQTLLRLKNASKVALGFFLWARDH 151 + A+ +++LL+QHHNPFHA ES LQL G+ LT L+ TLLRLKN SK+AL F +A+ Sbjct: 35 SDAELISKLLLQHHNPFHATESPLQLHGITLTPTLLFHTLLRLKNHSKIALSLFHYAKTL 94 Query: 150 AHHLHNADAYDLMVDILGRVRQFDVVWQLIVEMDQR-GVVPSPRTFAVLVR 1 + + ++ L++D + +VRQFDV WQLIVEMDQR + P+P TF L+R Sbjct: 95 PNPPLSHSSFTLLIDTMAKVRQFDVAWQLIVEMDQRHHLTPTPSTFLTLIR 145 >ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|222855714|gb|EEE93261.1| predicted protein [Populus trichocarpa] Length = 548 Score = 114 bits (286), Expect = 6e-24 Identities = 67/137 (48%), Positives = 83/137 (60%), Gaps = 26/137 (18%) Frame = -1 Query: 333 SASADALARLLIQHHNPFHAMESSLQLAGVGLTHDLVLQTLLRLKNASKVALGFFLWARD 154 S AD L+++L+ HHNPFHAMESSLQL G+ LT L+ QTLLRL++ SK+AL F Sbjct: 54 SNDADLLSQILLHHHNPFHAMESSLQLPGISLTPSLLHQTLLRLRHNSKIALSLF----- 108 Query: 153 HAHH-------------------LHNADA-------YDLMVDILGRVRQFDVVWQLIVEM 52 HH +AD+ Y+LM+DIL +VRQFDV WQLIVEM Sbjct: 109 --HHSLSLPPTSTDNPPTSTGTSTTSADSSTATTVTYNLMIDILAKVRQFDVCWQLIVEM 166 Query: 51 DQRGVVPSPRTFAVLVR 1 DQR V P+ TF VL+R Sbjct: 167 DQRNVKPTSETFFVLIR 183