BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031529
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containi...   137   7e-31
ref|XP_002889587.1| pentatricopeptide repeat-containing protein ...   118   4e-25
ref|NP_172104.1| pentatricopeptide repeat-containing protein [Ar...   115   5e-24
emb|CAN75184.1| hypothetical protein VITISV_001911 [Vitis vinifera]   100   2e-19
ref|XP_003520593.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17

>ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial [Vitis vinifera]
           gi|298205230|emb|CBI17289.3| unnamed protein product
           [Vitis vinifera]
          Length = 688

 Score =  137 bits (346), Expect = 7e-31
 Identities = 68/135 (50%), Positives = 94/135 (69%)
 Frame = +1

Query: 1   LESRDYVAPALISMYVESGCLLDAEKVFNIVSAENCSVWNLLMQGYSRASMDVHVFDLFN 180
           LE   YVAPAL+++Y E G L +A KVF  V  +N  +W ++++G+   S +  VF+LF+
Sbjct: 144 LEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFS 203

Query: 181 RMRRCGLEVDPCSALYIARACGNSGAGKEGQAIHGLSIKKNFLEFGSNVYLQTAFIDMYK 360
           RMRR G E+DP     + +ACGN  AGKEG+  HGL IKKNF++  SN +LQT+ +DMY 
Sbjct: 204 RMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFID--SNFFLQTSLVDMYM 261

Query: 361 KSGFIDFACKLFDEM 405
           K GF+DFA KLF+E+
Sbjct: 262 KCGFLDFALKLFEEI 276



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/132 (29%), Positives = 72/132 (54%)
 Frame = +1

Query: 1   LESRDYVAPALISMYVESGCLLDAEKVFNIVSAENCSVWNLLMQGYSRASMDVHVFDLFN 180
           ++S  ++  +L+ MY++ G L  A K+F  +S  +  VW+ ++ G++R    +    +F 
Sbjct: 246 IDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFR 305

Query: 181 RMRRCGLEVDPCSALYIARACGNSGAGKEGQAIHGLSIKKNFLEFGSNVYLQTAFIDMYK 360
           +M    +  +  +   I  AC + G+ K+G+++HG  I +N +E     Y  T+FIDMY 
Sbjct: 306 QMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMI-RNGVELDVKNY--TSFIDMYA 362

Query: 361 KSGFIDFACKLF 396
           K G I  A ++F
Sbjct: 363 KCGCIVTAYRVF 374



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/127 (28%), Positives = 64/127 (50%)
 Frame = +1

Query: 25  PALISMYVESGCLLDAEKVFNIVSAENCSVWNLLMQGYSRASMDVHVFDLFNRMRRCGLE 204
           P +   Y++ G L  A K FN ++ EN   WN ++  +S+      V  LF RM + G  
Sbjct: 51  PMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKL 110

Query: 205 VDPCSALYIARACGNSGAGKEGQAIHGLSIKKNFLEFGSNVYLQTAFIDMYKKSGFIDFA 384
           VD  + ++  +AC      +  +  H L+IK   L    + Y+  A +++Y + G ++ A
Sbjct: 111 VDSFNLVFAVKACFGLSLFQGAKLFHSLAIK---LRLEGDPYVAPALMNVYTELGSLEEA 167

Query: 385 CKLFDEM 405
            K+F+E+
Sbjct: 168 HKVFEEV 174


>ref|XP_002889587.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335429|gb|EFH65846.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 558

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/133 (43%), Positives = 87/133 (65%)
 Frame = +1

Query: 1   LESRDYVAPALISMYVESGCLLDAEKVFNIVSAENCSVWNLLMQGYSRASMDVHVFDLFN 180
           L+  DYVAP+L+ MY + G +  A+KVF+ +   N  +W +LM+GY + S D  VF LF 
Sbjct: 140 LDKDDYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLKYSKDSEVFRLFY 199

Query: 181 RMRRCGLEVDPCSALYIARACGNSGAGKEGQAIHGLSIKKNFLEFGSNVYLQTAFIDMYK 360
            MR  GL +D  + + + +ACGN  AGKEG+ +HGLSI+++F++   + YL+ + IDMY 
Sbjct: 200 LMRDTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFID--QSGYLEASIIDMYV 257

Query: 361 KSGFIDFACKLFD 399
           K   +D A KLF+
Sbjct: 258 KCRLLDNARKLFE 270



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/135 (29%), Positives = 71/135 (52%)
 Frame = +1

Query: 1   LESRDYVAPALISMYVESGCLLDAEKVFNIVSAENCSVWNLLMQGYSRASMDVHVFDLFN 180
           ++   Y+  ++I MYV+   L +A K+F      N  +W  L+ G+++    V   DLF 
Sbjct: 242 IDQSGYLEASIIDMYVKCRLLDNARKLFETSVERNVVMWTTLISGFAKCERAVEAIDLFR 301

Query: 181 RMRRCGLEVDPCSALYIARACGNSGAGKEGQAIHGLSIKKNFLEFGSNVYLQTAFIDMYK 360
           +M    +  + C+   I  +C + G+ + G+++HG  I +N +E  +  +  T+FID Y 
Sbjct: 302 QMLGESILPNHCTLAAILVSCSSLGSLRHGKSVHGYMI-RNGIEMDAVNF--TSFIDTYA 358

Query: 361 KSGFIDFACKLFDEM 405
           + G I  A K+FD M
Sbjct: 359 RCGNIQMARKVFDMM 373



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
 Frame = +1

Query: 28  ALISMYVESGCLLDAEKVFNIVSA--ENCSVWNLLMQGYSRASMDVH--VFDLFNRMRRC 195
           +L + Y++S  L  A   F+ +     N   WN ++ GYS++    +  V  L+NRMRR 
Sbjct: 44  SLTNAYIQSNRLDFATASFDRIPCWKRNRHSWNTILSGYSKSKSCYYSDVLLLYNRMRRH 103

Query: 196 GLEVDPCSALYIARACGNSGAGKEGQAIHGLSIKKNFLEFGSNVYLQTAFIDMYKKSGFI 375
              VD  + ++  +AC   G  + G  IHGL++K        + Y+  + ++MY + G +
Sbjct: 104 CDGVDSFNLVFAIKACVGLGLLENGMLIHGLAMKNG---LDKDDYVAPSLVEMYAQFGTM 160

Query: 376 DFACKLFDEM 405
           + A K+FDEM
Sbjct: 161 ESAQKVFDEM 170


>ref|NP_172104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g06140, mitochondrial; Flags: Precursor
           gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity
           to a hypothetical protein F24K9.13 gi|6006885 from
           Arabidopsis thaliana gb|AC008153 and contains multiple
           PPR PF|01535 repeats [Arabidopsis thaliana]
           gi|332189825|gb|AEE27946.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 558

 Score =  115 bits (287), Expect = 5e-24
 Identities = 57/133 (42%), Positives = 86/133 (64%)
 Frame = +1

Query: 1   LESRDYVAPALISMYVESGCLLDAEKVFNIVSAENCSVWNLLMQGYSRASMDVHVFDLFN 180
           L+  DYVAP+L+ MY + G +  A+KVF+ +   N  +W +LM+GY + S D  VF LF 
Sbjct: 140 LDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFC 199

Query: 181 RMRRCGLEVDPCSALYIARACGNSGAGKEGQAIHGLSIKKNFLEFGSNVYLQTAFIDMYK 360
            MR  GL +D  + + + +ACGN  AGK G+ +HG+SI+++F++   + YLQ + IDMY 
Sbjct: 200 LMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFID--QSDYLQASIIDMYV 257

Query: 361 KSGFIDFACKLFD 399
           K   +D A KLF+
Sbjct: 258 KCRLLDNARKLFE 270



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 43/135 (31%), Positives = 74/135 (54%)
 Frame = +1

Query: 1   LESRDYVAPALISMYVESGCLLDAEKVFNIVSAENCSVWNLLMQGYSRASMDVHVFDLFN 180
           ++  DY+  ++I MYV+   L +A K+F      N  +W  L+ G+++    V  FDLF 
Sbjct: 242 IDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFR 301

Query: 181 RMRRCGLEVDPCSALYIARACGNSGAGKEGQAIHGLSIKKNFLEFGSNVYLQTAFIDMYK 360
           +M R  +  + C+   I  +C + G+ + G+++HG  I +N +E  +  +  T+FIDMY 
Sbjct: 302 QMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMI-RNGIEMDAVNF--TSFIDMYA 358

Query: 361 KSGFIDFACKLFDEM 405
           + G I  A  +FD M
Sbjct: 359 RCGNIQMARTVFDMM 373



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 4/138 (2%)
 Frame = +1

Query: 4   ESRDYVAPALISMYVESGCLLDAEKVFNIVSA--ENCSVWNLLMQGYSRASMDVH--VFD 171
           E    +  +L + Y++S  L  A   FN +     N   WN ++ GYS++    +  V  
Sbjct: 36  EDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLL 95

Query: 172 LFNRMRRCGLEVDPCSALYIARACGNSGAGKEGQAIHGLSIKKNFLEFGSNVYLQTAFID 351
           L+NRMRR    VD  + ++  +AC   G  + G  IHGL++K        + Y+  + ++
Sbjct: 96  LYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNG---LDKDDYVAPSLVE 152

Query: 352 MYKKSGFIDFACKLFDEM 405
           MY + G ++ A K+FDE+
Sbjct: 153 MYAQLGTMESAQKVFDEI 170


>emb|CAN75184.1| hypothetical protein VITISV_001911 [Vitis vinifera]
          Length = 596

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 54/133 (40%), Positives = 77/133 (57%)
 Frame = +1

Query: 1   LESRDYVAPALISMYVESGCLLDAEKVFNIVSAENCSVWNLLMQGYSRASMDVHVFDLFN 180
           LE   YVAPAL+++Y E G L +A KVF  V  +N  +W ++++GY   S +  VF+LF+
Sbjct: 93  LEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGYLNFSEEFGVFELFS 152

Query: 181 RMRRCGLEVDPCSALYIARACGNSGAGKEGQAIHGLSIKKNFLEFGSNVYLQTAFIDMYK 360
           RMRR G E+DP     + +ACGN  AGKEG+  HGL             Y  + ++  Y+
Sbjct: 153 RMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGL-------------YFSSGYV--YE 197

Query: 361 KSGFIDFACKLFD 399
             GF+D A  LF+
Sbjct: 198 VRGFLDXALXLFE 210



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/125 (28%), Positives = 63/125 (50%)
 Frame = +1

Query: 31  LISMYVESGCLLDAEKVFNIVSAENCSVWNLLMQGYSRASMDVHVFDLFNRMRRCGLEVD 210
           +   Y++ G L  A K FN ++ EN   WN ++  +S+      V  LF RM + G  VD
Sbjct: 2   IFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVD 61

Query: 211 PCSALYIARACGNSGAGKEGQAIHGLSIKKNFLEFGSNVYLQTAFIDMYKKSGFIDFACK 390
             + ++  +AC      +  +  H L+IK   L    + Y+  A +++Y + G ++ A K
Sbjct: 62  SFNLVFAVKACFGLSLFQGAKLFHSLAIK---LRLEGDPYVAPALMNVYTELGSLEEAHK 118

Query: 391 LFDEM 405
           +F+E+
Sbjct: 119 VFEEV 123


>ref|XP_003520593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial-like [Glycine max]
          Length = 599

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 54/135 (40%), Positives = 78/135 (57%), Gaps = 1/135 (0%)
 Frame = +1

Query: 1   LESRDYVAPALISMYVESGCLLDAEKVFNIVSAENCSVWNLLMQGYSRASMDVHVFDLFN 180
           LE   + APA++ MY E G L DA K+F   S  +  +W  +++GY   S++  VF+LF+
Sbjct: 142 LEGDLFFAPAILDMYAELGSLDDARKLFERYSYRSSVMWGFMIKGYLNFSLESKVFELFS 201

Query: 181 RMRR-CGLEVDPCSALYIARACGNSGAGKEGQAIHGLSIKKNFLEFGSNVYLQTAFIDMY 357
            M    G + D  +   + RAC N  AG+EG+A HG+ IK N L    NV L T+ IDMY
Sbjct: 202 CMTNYFGFKWDAFTMEGLVRACANLLAGREGKASHGVCIKNNLL---VNVCLLTSVIDMY 258

Query: 358 KKSGFIDFACKLFDE 402
            K G   +A +LF++
Sbjct: 259 MKCGVTHYAFRLFEK 273



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 40/133 (30%), Positives = 70/133 (52%)
 Frame = +1

Query: 1   LESRDYVAPALISMYVESGCLLDAEKVFNIVSAENCSVWNLLMQGYSRASMDVHVFDLFN 180
           L  + +    + ++Y++SG L  A+K F+ +S +N   WN ++ GYS+ S+   V  LF 
Sbjct: 41  LHKKVFYGSNITNVYIQSGSLPLAKKAFDQISVKNLHSWNTIISGYSKRSLYGDVLQLFR 100

Query: 181 RMRRCGLEVDPCSALYIARACGNSGAGKEGQAIHGLSIKKNFLEFGSNVYLQTAFIDMYK 360
           R+R  G  VD  + ++  +A         G+ +H L+IK        +++   A +DMY 
Sbjct: 101 RLRSEGNAVDGFNLVFSVKASQRLLLLHNGRLLHCLAIKSG---LEGDLFFAPAILDMYA 157

Query: 361 KSGFIDFACKLFD 399
           + G +D A KLF+
Sbjct: 158 ELGSLDDARKLFE 170