BLASTX nr result

ID: Dioscorea21_contig00030999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030999
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525759.1| meiotic recombination repair protein, putati...   191   5e-47
ref|NP_200237.1| double-strand break repair protein MRE11 [Arabi...   189   2e-46
ref|XP_002864322.1| hypothetical protein ARALYDRAFT_495511 [Arab...   187   8e-46
ref|XP_002447179.1| hypothetical protein SORBIDRAFT_06g029960 [S...   187   1e-45
ref|XP_002330391.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-45

>ref|XP_002525759.1| meiotic recombination repair protein, putative [Ricinus communis]
           gi|223534909|gb|EEF36595.1| meiotic recombination repair
           protein, putative [Ricinus communis]
          Length = 765

 Score =  191 bits (485), Expect = 5e-47
 Identities = 94/106 (88%), Positives = 103/106 (97%)
 Frame = +1

Query: 1   QEVMGMGFHITQPGSSVATSLIEGEAKPKHVLLLEIKGSQYRPTKIPLKSVRPFEYAEVV 180
           QEV GMGFHITQPGSSVATSLI+GE+KPKHVLLLEIKG+QYRPTKIPL SVRPFEYAEVV
Sbjct: 262 QEVPGMGFHITQPGSSVATSLIDGESKPKHVLLLEIKGNQYRPTKIPLTSVRPFEYAEVV 321

Query: 181 LKDESDIDPNDQASVLEHLDKVVRNLIEKSNKRSVNRSELKLPLVR 318
           LKDE+DIDPNDQ+S+LEHLDKVV NLIEKSNK++V+RSELKLPLVR
Sbjct: 322 LKDENDIDPNDQSSILEHLDKVVNNLIEKSNKKAVSRSELKLPLVR 367


>ref|NP_200237.1| double-strand break repair protein MRE11 [Arabidopsis thaliana]
           gi|17380154|sp|Q9XGM2.1|MRE11_ARATH RecName:
           Full=Double-strand break repair protein MRE11
           gi|5524769|emb|CAB50793.1| Mre11 protein [Arabidopsis
           thaliana] gi|9759499|dbj|BAB10749.1| DNA repair and
           meiosis protein Mre11 [Arabidopsis thaliana]
           gi|332009093|gb|AED96476.1| double-strand break repair
           protein MRE11 [Arabidopsis thaliana]
          Length = 720

 Score =  189 bits (481), Expect = 2e-46
 Identities = 92/106 (86%), Positives = 102/106 (96%)
 Frame = +1

Query: 1   QEVMGMGFHITQPGSSVATSLIEGEAKPKHVLLLEIKGSQYRPTKIPLKSVRPFEYAEVV 180
           QEV GMGFHITQPGSSVATSLI+GE+KPKHVLLLEIKG+QYRPTKIPL SVRPFEY E+V
Sbjct: 259 QEVSGMGFHITQPGSSVATSLIDGESKPKHVLLLEIKGNQYRPTKIPLTSVRPFEYTEIV 318

Query: 181 LKDESDIDPNDQASVLEHLDKVVRNLIEKSNKRSVNRSELKLPLVR 318
           LKDESDIDPNDQ S+LEHLDKVVRNLIEK++K++VNRSE+KLPLVR
Sbjct: 319 LKDESDIDPNDQNSILEHLDKVVRNLIEKASKKAVNRSEIKLPLVR 364


>ref|XP_002864322.1| hypothetical protein ARALYDRAFT_495511 [Arabidopsis lyrata subsp.
           lyrata] gi|297310157|gb|EFH40581.1| hypothetical protein
           ARALYDRAFT_495511 [Arabidopsis lyrata subsp. lyrata]
          Length = 733

 Score =  187 bits (475), Expect = 8e-46
 Identities = 91/106 (85%), Positives = 100/106 (94%)
 Frame = +1

Query: 1   QEVMGMGFHITQPGSSVATSLIEGEAKPKHVLLLEIKGSQYRPTKIPLKSVRPFEYAEVV 180
           QEV GMGFHITQPGSSVATSLI+GE+KPKHVLLLEIKG+QYRPTKIPL SVRPFEY E+V
Sbjct: 259 QEVSGMGFHITQPGSSVATSLIDGESKPKHVLLLEIKGNQYRPTKIPLTSVRPFEYTEIV 318

Query: 181 LKDESDIDPNDQASVLEHLDKVVRNLIEKSNKRSVNRSELKLPLVR 318
           LKDE DIDPNDQ S+LEHLDKVVRNLIEK++K +VNRSE+KLPLVR
Sbjct: 319 LKDEGDIDPNDQNSILEHLDKVVRNLIEKASKNAVNRSEIKLPLVR 364


>ref|XP_002447179.1| hypothetical protein SORBIDRAFT_06g029960 [Sorghum bicolor]
           gi|241938362|gb|EES11507.1| hypothetical protein
           SORBIDRAFT_06g029960 [Sorghum bicolor]
          Length = 704

 Score =  187 bits (474), Expect = 1e-45
 Identities = 92/106 (86%), Positives = 102/106 (96%)
 Frame = +1

Query: 1   QEVMGMGFHITQPGSSVATSLIEGEAKPKHVLLLEIKGSQYRPTKIPLKSVRPFEYAEVV 180
           QEV GMGFHITQPGSSVATSLI+GEAKPKHVLLLEIKG+QYRPTKIPL+SVRPFEYAEVV
Sbjct: 266 QEVPGMGFHITQPGSSVATSLIDGEAKPKHVLLLEIKGNQYRPTKIPLRSVRPFEYAEVV 325

Query: 181 LKDESDIDPNDQASVLEHLDKVVRNLIEKSNKRSVNRSELKLPLVR 318
           LKDE+D+DPNDQASVLEHLDK+VRNLIEKS++ + +RSE KLPLVR
Sbjct: 326 LKDEADVDPNDQASVLEHLDKIVRNLIEKSSQPTASRSEPKLPLVR 371


>ref|XP_002330391.1| predicted protein [Populus trichocarpa] gi|222871776|gb|EEF08907.1|
           predicted protein [Populus trichocarpa]
          Length = 772

 Score =  186 bits (473), Expect = 1e-45
 Identities = 92/106 (86%), Positives = 101/106 (95%)
 Frame = +1

Query: 1   QEVMGMGFHITQPGSSVATSLIEGEAKPKHVLLLEIKGSQYRPTKIPLKSVRPFEYAEVV 180
           QEV GMGFHITQPGSSVATSLI+GE+KPKHVLLLEIKG+QYRPTKIPL SVRPFEY E+V
Sbjct: 262 QEVPGMGFHITQPGSSVATSLIDGESKPKHVLLLEIKGNQYRPTKIPLTSVRPFEYKEIV 321

Query: 181 LKDESDIDPNDQASVLEHLDKVVRNLIEKSNKRSVNRSELKLPLVR 318
           LKDESDIDPNDQ S+LEHLD VVRNLIEKS+K++V+RSELKLPLVR
Sbjct: 322 LKDESDIDPNDQNSILEHLDTVVRNLIEKSSKKAVSRSELKLPLVR 367


Top