BLASTX nr result

ID: Dioscorea21_contig00030992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030992
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307479.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea m...   125   4e-27
ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containi...   124   8e-27
ref|XP_002454417.1| hypothetical protein SORBIDRAFT_04g030430 [S...   124   1e-26
gb|AFW63550.1| hypothetical protein ZEAMMB73_399779 [Zea mays]        123   1e-26

>ref|XP_002307479.1| predicted protein [Populus trichocarpa] gi|222856928|gb|EEE94475.1|
            predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  126 bits (316), Expect = 2e-27
 Identities = 57/137 (41%), Positives = 90/137 (65%)
 Frame = +3

Query: 3    PNQSTFISLLSSCASFGFLGLSKQFHAQAVLRGFGSNDNVQAVIIDMYAKCGDLKAAHAA 182
            P+Q+TF+S L +CA    +    + H+     GF S++   + ++DMYAKCGD+K++   
Sbjct: 730  PDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQV 789

Query: 183  FDRMGAKKNIVVWNSMICGYGKHGRTIEALEVFNSMALASVSPNQITFTCLLSACSHSGF 362
            F  M  KK+++ WNSMI G+ K+G   +AL VF+ M  + V+P+ +TF  +L+ACSHSG 
Sbjct: 790  FKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGR 849

Query: 363  IDEGWKLFDLMTNVHGM 413
            + EG  +FD+M N++GM
Sbjct: 850  VSEGRLIFDMMVNLYGM 866



 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/129 (35%), Positives = 79/129 (61%)
 Frame = +3

Query: 9   QSTFISLLSSCASFGFLGLSKQFHAQAVLRGFGSNDNVQAVIIDMYAKCGDLKAAHAAFD 188
           +ST  S+LS+ AS   L      HA+A+ +G  SN  V + ++ MYAKCG ++AA   FD
Sbjct: 327 RSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFD 386

Query: 189 RMGAKKNIVVWNSMICGYGKHGRTIEALEVFNSMALASVSPNQITFTCLLSACSHSGFID 368
            +  ++N+V+WN+M+ GY ++G   E +E+F +M      P+  T++ +LSAC+   ++D
Sbjct: 387 TLN-EQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLD 445

Query: 369 EGWKLFDLM 395
            G +L  ++
Sbjct: 446 LGHQLHSVI 454



 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 49/133 (36%), Positives = 66/133 (49%)
 Frame = +3

Query: 3   PNQSTFISLLSSCASFGFLGLSKQFHAQAVLRGFGSNDNVQAVIIDMYAKCGDLKAAHAA 182
           PN+ TF  +LSSCA    +   +Q H   V  GF S    +  +I MYAKC  L  A + 
Sbjct: 158 PNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSI 217

Query: 183 FDRMGAKKNIVVWNSMICGYGKHGRTIEALEVFNSMALASVSPNQITFTCLLSACSHSGF 362
           FD    + + V W SMI GY K G   EA++VF  M      P+Q+ F  +++A    G 
Sbjct: 218 FDG-AVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGR 276

Query: 363 IDEGWKLFDLMTN 401
           +D    LF  M N
Sbjct: 277 LDNASDLFSRMPN 289



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/124 (33%), Positives = 69/124 (55%)
 Frame = +3

Query: 3   PNQSTFISLLSSCASFGFLGLSKQFHAQAVLRGFGSNDNVQAVIIDMYAKCGDLKAAHAA 182
           P+  T+ S+LS+CA   +L L  Q H+  +   F SN  V   ++DMYAK G L+ A   
Sbjct: 426 PDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQ 485

Query: 183 FDRMGAKKNIVVWNSMICGYGKHGRTIEALEVFNSMALASVSPNQITFTCLLSACSHSGF 362
           F+ +  + N V WN +I GY +    +EA  +F  M L  + P++++   +LSAC+    
Sbjct: 486 FELIRNRDN-VSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRG 544

Query: 363 IDEG 374
           +++G
Sbjct: 545 LEQG 548



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/131 (31%), Positives = 71/131 (54%)
 Frame = +3

Query: 3   PNQSTFISLLSSCASFGFLGLSKQFHAQAVLRGFGSNDNVQAVIIDMYAKCGDLKAAHAA 182
           P++ +  S+LS+CAS   L   KQ H  +V  G  +     + +IDMYAKCG + +AH  
Sbjct: 527 PDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKI 586

Query: 183 FDRMGAKKNIVVWNSMICGYGKHGRTIEALEVFNSMALASVSPNQITFTCLLSACSHSGF 362
              M  ++++V  N++I GY +     +A+ +F  M +  ++  +ITF  LL AC     
Sbjct: 587 LACM-PERSVVSMNALIAGYAQINLE-QAVNLFRDMLVEGINSTEITFASLLDACHEQQK 644

Query: 363 IDEGWKLFDLM 395
           ++ G ++  L+
Sbjct: 645 LNLGRQIHSLI 655



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/99 (35%), Positives = 57/99 (57%)
 Frame = +3

Query: 54  FLGLSKQFHAQAVLRGFGSNDNVQAVIIDMYAKCGDLKAAHAAFDRMGAKKNIVVWNSMI 233
           F   +K  HAQ++  GF S   +  VI+D+YAKC D+  A  AF ++   K+I+ WNS++
Sbjct: 74  FSTTNKIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQL-EDKDILAWNSIL 132

Query: 234 CGYGKHGRTIEALEVFNSMALASVSPNQITFTCLLSACS 350
             + K G     ++ F  +  + V PN+ TF  +LS+C+
Sbjct: 133 SMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCA 171



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
 Frame = +3

Query: 15   TFISLLSSCASFGFLGLSKQFHAQAVLRGFGSNDNVQAV-IIDMYAKCGDLKAAHAAFDR 191
            TF SLL +C     L L +Q H+  +  G   +D    V ++ MY        A   F  
Sbjct: 631  TFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSE 690

Query: 192  MGAKKNIVVWNSMICGYGKHGRTIEALEVFNSMALASVSPNQITFTCLLSACSHSGFIDE 371
                K+ VVW +MI G  ++  ++ AL+++  M   +V P+Q TF   L AC+    I +
Sbjct: 691  FSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKD 750

Query: 372  GWKLFDLM 395
            G +   L+
Sbjct: 751  GTETHSLI 758


>tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/137 (43%), Positives = 82/137 (59%)
 Frame = +3

Query: 3   PNQSTFISLLSSCASFGFLGLSKQFHAQAVLRGFGSNDNVQAVIIDMYAKCGDLKAAHAA 182
           P   TF SL+  C +   L   KQ HA  +  GF  N  + + +IDMY KCG++  AH  
Sbjct: 269 PVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCI 328

Query: 183 FDRMGAKKNIVVWNSMICGYGKHGRTIEALEVFNSMALASVSPNQITFTCLLSACSHSGF 362
           FD+M +  ++V W +MI GY  HG   EAL +F  M L +  PN ITF  +L+ACSH+G 
Sbjct: 329 FDKMSSP-DVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGL 387

Query: 363 IDEGWKLFDLMTNVHGM 413
           +D+GWK F  M+N +G+
Sbjct: 388 VDKGWKYFKSMSNHYGI 404



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 38/124 (30%), Positives = 62/124 (50%)
 Frame = +3

Query: 12  STFISLLSSCASFGFLGLSKQFHAQAVLRGFGSNDNVQAVIIDMYAKCGDLKAAHAAFDR 191
           ST + + + CA    +    + H  A   GF S+  V + +IDMYA C     +   FD 
Sbjct: 174 STVLPIFAECAD---VKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDN 230

Query: 192 MGAKKNIVVWNSMICGYGKHGRTIEALEVFNSMALASVSPNQITFTCLLSACSHSGFIDE 371
           +  + +I+ WNS++ G  ++G   EAL +F  M  A V P  +TF+ L+  C +   +  
Sbjct: 231 LPVRDHIL-WNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRF 289

Query: 372 GWKL 383
           G +L
Sbjct: 290 GKQL 293


>ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Glycine max]
          Length = 628

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/137 (43%), Positives = 84/137 (61%)
 Frame = +3

Query: 3   PNQSTFISLLSSCASFGFLGLSKQFHAQAVLRGFGSNDNVQAVIIDMYAKCGDLKAAHAA 182
           PN+ T +++LSSC   G L   K  H+     G   N  V   ++DMY KCG L+ A   
Sbjct: 254 PNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKV 313

Query: 183 FDRMGAKKNIVVWNSMICGYGKHGRTIEALEVFNSMALASVSPNQITFTCLLSACSHSGF 362
           FD M  K ++V WNSMI GYG HG + EAL++F+ M    V P+ ITF  +L+AC+H+G 
Sbjct: 314 FDVMEGK-DVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGL 372

Query: 363 IDEGWKLFDLMTNVHGM 413
           + +GW++FD M + +GM
Sbjct: 373 VSKGWEVFDSMKDGYGM 389



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 37/161 (22%)
 Frame = +3

Query: 3   PNQSTFISLLSSCASFGFLGLSKQFHAQAVLRGFGSNDNVQAVIIDMYAKCGDLKAAHAA 182
           PN  T  SLL +C     L  ++  H+ A+  G  S+  V   ++D YA+ GD+ +A   
Sbjct: 119 PNAFTLSSLLKACT----LHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKL 174

Query: 183 FDRMGAK------------------------------KNIVVWNSMICGYGKHGRTIEAL 272
           FD M  +                              K++V WN MI GY +HG   EAL
Sbjct: 175 FDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEAL 234

Query: 273 EVFNSMAL-------ASVSPNQITFTCLLSACSHSGFIDEG 374
             F  M +         V PN+IT   +LS+C   G ++ G
Sbjct: 235 VFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECG 275


>ref|XP_002454417.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
           gi|241934248|gb|EES07393.1| hypothetical protein
           SORBIDRAFT_04g030430 [Sorghum bicolor]
          Length = 703

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/137 (43%), Positives = 87/137 (63%)
 Frame = +3

Query: 3   PNQSTFISLLSSCASFGFLGLSKQFHAQAVLRGFGSNDNVQAVIIDMYAKCGDLKAAHAA 182
           P+  T + +L++C+ FG   L+   H   V  GF +N  V A ++D+Y+KCGD+ +A   
Sbjct: 400 PDAITMVKVLAACSEFGGTRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDIDSAVRV 459

Query: 183 FDRMGAKKNIVVWNSMICGYGKHGRTIEALEVFNSMALASVSPNQITFTCLLSACSHSGF 362
           F+    +K+IVVW SMI GYG HG   EA+ ++  M  +S+ PN +TF  +LSACSHSG 
Sbjct: 460 FEGT-TEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNSVTFVSVLSACSHSGL 518

Query: 363 IDEGWKLFDLMTNVHGM 413
           + EG ++FD MT V G+
Sbjct: 519 VQEGIQIFDSMTQVFGV 535



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/130 (27%), Positives = 65/130 (50%)
 Frame = +3

Query: 15  TFISLLSSCASFGFLGLSKQFHAQAVLRGFGSNDNVQAVIIDMYAKCGDLKAAHAAFDRM 194
           T +S +S+ A  G +   +  HA  V    G +  +   ++  Y K GD +A+   F+ M
Sbjct: 202 TLVSAMSAAAQLGHVRKGQACHAYVVRNSLGYDLALVNTVLSFYVKIGDFQASMRLFEGM 261

Query: 195 GAKKNIVVWNSMICGYGKHGRTIEALEVFNSMALASVSPNQITFTCLLSACSHSGFIDEG 374
              ++++ W+ MI GY +HG   E L ++  M  A V PN +T   +L AC+     +EG
Sbjct: 262 -TDRDVITWSCMIKGYVQHGDAHEGLRMYREMVKARVQPNSVTLVSVLQACALVVDAEEG 320

Query: 375 WKLFDLMTNV 404
            ++  +  ++
Sbjct: 321 KRVHRVAVSI 330



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 42/119 (35%), Positives = 59/119 (49%)
 Frame = +3

Query: 3   PNQSTFISLLSSCASFGFLGLSKQFHAQAVLRGFGSNDNVQAVIIDMYAKCGDLKAAHAA 182
           PN  T +S+L +CA        K+ H  AV  G      V   ++DMY KC   + A   
Sbjct: 299 PNSVTLVSVLQACALVVDAEEGKRVHRVAVSIGCELEVGVATALVDMYMKCSCHEEAMCL 358

Query: 183 FDRMGAKKNIVVWNSMICGYGKHGRTIEALEVFNSMALASVSPNQITFTCLLSACSHSG 359
           F RM  KK++V W ++I G  ++    E+L VF  M L    P+ IT   +L+ACS  G
Sbjct: 359 FHRM-PKKDVVAWAAVIGGLTQNELPGESLHVFKCMLLDDHVPDAITMVKVLAACSEFG 416



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
 Frame = +3

Query: 15  TFISLLSSCASFGFLGLSKQFHAQAVLRGFGSNDN-VQAVIIDMYAKCGDLKAAHAAFDR 191
           TF  LL +CA+   L   +  HA A+     S D  V   I+ MYA+CGD+  A  A+  
Sbjct: 99  TFSLLLRACAALPSLAHGRAVHAVAIRSCTASEDAFVATAIVQMYARCGDMVGAINAYGV 158

Query: 192 MGAKKNIVVWNSMICGYGKHGRTIEALEVF-NSMALASVSPNQITFTCLLSACSHSGFID 368
           +  K +IV+  S++ GY ++G   EALE F  ++    V    +T    +SA +  G + 
Sbjct: 159 L-EKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVMLTPVTLVSAMSAAAQLGHVR 217

Query: 369 EG 374
           +G
Sbjct: 218 KG 219


>gb|AFW63550.1| hypothetical protein ZEAMMB73_399779 [Zea mays]
          Length = 1118

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/137 (43%), Positives = 87/137 (63%)
 Frame = +3

Query: 3    PNQSTFISLLSSCASFGFLGLSKQFHAQAVLRGFGSNDNVQAVIIDMYAKCGDLKAAHAA 182
            P+  T + +L++C+ FG   L+   H   V  GF +N  V A ++D+Y+KCGDL +A   
Sbjct: 869  PDAVTMVKVLAACSEFGGNRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDLDSAVRV 928

Query: 183  FDRMGAKKNIVVWNSMICGYGKHGRTIEALEVFNSMALASVSPNQITFTCLLSACSHSGF 362
            F+    +K+IVVW SMI GYG HG   EA+ ++  M  +S+ PN +TF  +LSACSHSG 
Sbjct: 929  FEGT-TEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNNVTFLSVLSACSHSGL 987

Query: 363  IDEGWKLFDLMTNVHGM 413
            + EG ++FD MT V G+
Sbjct: 988  VQEGIQIFDSMTQVFGV 1004



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/130 (26%), Positives = 64/130 (49%)
 Frame = +3

Query: 15   TFISLLSSCASFGFLGLSKQFHAQAVLRGFGSNDNVQAVIIDMYAKCGDLKAAHAAFDRM 194
            T +S++S+ A  G +   +  HA  V      +  +   ++  Y K GDL+A+   F+ M
Sbjct: 671  TLVSVMSAAAQLGHVRKGQACHAYVVRNSLSYDLALVNAVLGFYVKIGDLQASMRLFEGM 730

Query: 195  GAKKNIVVWNSMICGYGKHGRTIEALEVFNSMALASVSPNQITFTCLLSACSHSGFIDEG 374
               ++++ W+ MI GY +HG       ++  M  A V PN +T   +L AC+     +EG
Sbjct: 731  -TDRDVITWSCMIKGYVQHGDAHTGFRMYREMVKARVQPNSVTLVSVLQACALVVDAEEG 789

Query: 375  WKLFDLMTNV 404
             +L  +  ++
Sbjct: 790  KRLHRVAVSI 799



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 40/119 (33%), Positives = 58/119 (48%)
 Frame = +3

Query: 3    PNQSTFISLLSSCASFGFLGLSKQFHAQAVLRGFGSNDNVQAVIIDMYAKCGDLKAAHAA 182
            PN  T +S+L +CA        K+ H  AV  G      V   ++DMY KC   + A   
Sbjct: 768  PNSVTLVSVLQACALVVDAEEGKRLHRVAVSIGCELELGVATALVDMYMKCSCHEEAMRL 827

Query: 183  FDRMGAKKNIVVWNSMICGYGKHGRTIEALEVFNSMALASVSPNQITFTCLLSACSHSG 359
            F RM  KK++V W ++I G  ++    E+L  F  M L    P+ +T   +L+ACS  G
Sbjct: 828  FHRM-PKKDVVAWAAVIGGLTQNELPGESLHSFKCMLLNDHVPDAVTMVKVLAACSEFG 885



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
 Frame = +3

Query: 15  TFISLLSSCASFGFLGLSKQFHAQAVLRGFGSNDN-VQAVIIDMYAKCGDLKAAHAAFDR 191
           T   LL +C +   L   +  HA AV     S D  V   I+ MY++CGD+  A  A+  
Sbjct: 568 TLSLLLRACTALPSLTHGRAVHAAAVRSCTASEDAFVATAIVQMYSRCGDMAGAINAYGM 627

Query: 192 MGAKKNIVVWNSMICGYGKHGRTIEALEVF-NSMALASVSPNQITFTCLLSACSHSGFID 368
           +  K +IV+  S++ GY ++G   EALE F  ++    V    +T   ++SA +  G + 
Sbjct: 628 L-EKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVLVTPVTLVSVMSAAAQLGHVR 686

Query: 369 EG 374
           +G
Sbjct: 687 KG 688


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