BLASTX nr result

ID: Dioscorea21_contig00030991 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030991
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-...   178   9e-43
emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]   178   9e-43
ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-...   158   1e-36
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   155   9e-36
ref|XP_003569087.1| PREDICTED: replication protein A 70 kDa DNA-...   150   2e-34

>ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Vitis vinifera]
          Length = 882

 Score =  178 bits (452), Expect = 9e-43
 Identities = 110/255 (43%), Positives = 145/255 (56%), Gaps = 6/255 (2%)
 Frame = +1

Query: 1   VNTAQ--NTAERYRMMLSDGTHTQQAMLATQMNPIVKSGALQKGSIVRLNEFICNVIQGR 174
           VNT Q  N+ ER+R++LSDG H QQ MLATQ N +VKSG LQKGS+V+L +F+CNVI+ R
Sbjct: 35  VNTQQQSNSNERFRILLSDGCHLQQGMLATQRNELVKSGRLQKGSVVQLTQFVCNVIKDR 94

Query: 175 RIIIVINLEVIVSKHDIIGEPKQY---DTAAAGSQLRAPVSAQPSGMNQSSIPAGNPQSY 345
            III+I+L+VI+ K D IGEPKQY    TA   + +    +  PS ++      GNPQS+
Sbjct: 95  MIIIIIDLDVILEKCDPIGEPKQYVQGGTAGGVAPIARTSAPMPSSVDHPGTVLGNPQSF 154

Query: 346 XXXXXXXXXXXQ-NVAGRSSMYTNAESVTNPXXXXXXXXXXXXXXRNMNNINSHYPRAEQ 522
                      + N+AG +S Y      +NP                M   ++  P +  
Sbjct: 155 GNSSLTGGSAAKPNMAGVASPYHANSFSSNPDSGRFAGTNAPPMYSKMQP-DAGIPASAA 213

Query: 523 GGGASNDMQVNGGYQNQRFSNSVPAGGYRPPANAYDRTGQPTYAQPPPLYTNRGPIAKNE 702
             G+  D     G++N +   S      R P NA  R  Q  Y QPPP+YTNRGP+A+NE
Sbjct: 214 STGSYGDQST--GFRNNKVEVS------RAPYNAPARQPQSAYQQPPPMYTNRGPVARNE 265

Query: 703 APARIIPIAALNPYR 747
           A ARIIPIAALNPY+
Sbjct: 266 AAARIIPIAALNPYQ 280


>emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
          Length = 882

 Score =  178 bits (452), Expect = 9e-43
 Identities = 110/255 (43%), Positives = 145/255 (56%), Gaps = 6/255 (2%)
 Frame = +1

Query: 1   VNTAQ--NTAERYRMMLSDGTHTQQAMLATQMNPIVKSGALQKGSIVRLNEFICNVIQGR 174
           VNT Q  N+ ER+R++LSDG H QQ MLATQ N +VKSG LQKGS+V+L +F+CNVI+ R
Sbjct: 35  VNTQQQSNSNERFRILLSDGCHLQQGMLATQRNELVKSGRLQKGSVVQLTQFVCNVIKDR 94

Query: 175 RIIIVINLEVIVSKHDIIGEPKQY---DTAAAGSQLRAPVSAQPSGMNQSSIPAGNPQSY 345
            III+I+L+VI+ K D IGEPKQY    TA   + +    +  PS ++      GNPQS+
Sbjct: 95  MIIIIIDLDVILEKCDPIGEPKQYVQGGTAGGVAPIARTSAPMPSSVDHPGTVLGNPQSF 154

Query: 346 XXXXXXXXXXXQ-NVAGRSSMYTNAESVTNPXXXXXXXXXXXXXXRNMNNINSHYPRAEQ 522
                      + N+AG +S Y      +NP                M   ++  P +  
Sbjct: 155 GNSSLTGGSAAKPNMAGVASPYHANSFSSNPDSGRFAGTNAPPMYSKMQP-DAGIPASAA 213

Query: 523 GGGASNDMQVNGGYQNQRFSNSVPAGGYRPPANAYDRTGQPTYAQPPPLYTNRGPIAKNE 702
             G+  D     G++N +   S      R P NA  R  Q  Y QPPP+YTNRGP+A+NE
Sbjct: 214 STGSYGDQST--GFRNNKVEVS------RAPYNAPARQPQSAYQQPPPMYTNRGPVARNE 265

Query: 703 APARIIPIAALNPYR 747
           A ARIIPIAALNPY+
Sbjct: 266 AXARIIPIAALNPYQ 280


>ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Glycine max]
          Length = 894

 Score =  158 bits (399), Expect = 1e-36
 Identities = 104/253 (41%), Positives = 136/253 (53%), Gaps = 4/253 (1%)
 Frame = +1

Query: 1   VNTAQNT-AERYRMMLSDGTHTQQAMLATQMNPIVKSGALQKGSIVRLNEFICNVIQGRR 177
           V + QN+  ERYR++LSDG+H QQ MLATQ N +V +G LQKGS+VRL +FICNV+Q R+
Sbjct: 34  VQSQQNSNVERYRLVLSDGSHYQQGMLATQKNDLVHAGKLQKGSVVRLTQFICNVVQSRK 93

Query: 178 IIIVINLEVIVSKHDIIGEPKQYDTAAAGSQLRAPVSA-QPSGMNQSSIPAGNPQSYXXX 354
           III+++L+V++ K ++IGEP           + AP  A   S   QS + +GNPQ     
Sbjct: 94  IIIIVDLDVVLDKCELIGEP-----------VPAPKDAPTESATGQSGVTSGNPQLLNSS 142

Query: 355 XXXXXXXXQ-NVAGRSSMYTNAESVTNPXXXXXXXXXXXXXXRNMNNINSHYPRAEQGGG 531
                   + NVA  S  +       NP                 +N    YP+ E G  
Sbjct: 143 SHTGGMPARPNVASPSPDHPK----VNPSASGVY----------SSNAPPTYPKVEHGVS 188

Query: 532 ASNDMQVNGGYQNQRFSNSVPAGGYRPPANAYDR-TGQPTYAQPPPLYTNRGPIAKNEAP 708
            S     + G QN  F N       RP  N+Y R   QP Y QP P+YTNR P+ +NEA 
Sbjct: 189 RSAPFSGSSGGQNTGFRNP-QFEASRPLQNSYARPPQQPMYRQPSPMYTNRAPMGRNEAA 247

Query: 709 ARIIPIAALNPYR 747
            RIIPIAALNPY+
Sbjct: 248 PRIIPIAALNPYQ 260


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355513943|gb|AES95566.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 1723

 Score =  155 bits (392), Expect = 9e-36
 Identities = 99/252 (39%), Positives = 130/252 (51%), Gaps = 3/252 (1%)
 Frame = +1

Query: 1   VNTAQNTA-ERYRMMLSDGTHTQQAMLATQMNPIVKSGALQKGSIVRLNEFICNVIQGRR 177
           V + QN+  ERYR++LSDG H QQ MLATQ N +V SG LQKGSIV+L++FICNV+Q R+
Sbjct: 32  VQSQQNSGTERYRVVLSDGLHYQQGMLATQKNELVHSGRLQKGSIVKLSQFICNVVQNRK 91

Query: 178 IIIVINLEVIVSKHDIIGEPKQYDTAAAGSQLRAPVSAQPSGMNQSSIPAGNPQSYXXXX 357
           III+++L+VI+ K D+IG+P             +      S        AGN Q      
Sbjct: 92  IIIIVDLDVIMDKCDLIGKPDPAPKEDPAQSAVSHAGNVQSAAGHLGSNAGNSQ--YLNS 149

Query: 358 XXXXXXXQNVAGRSSMYTNAESVTNPXXXXXXXXXXXXXXRNMNNINSHYPRAEQGGGAS 537
                   NV    ++ +      NP                 +N    YP+ E G   +
Sbjct: 150 GSHTGGGVNVRPNVALPSMDRPTVNPPASVVYSNGSGSARYGASNAPPPYPKPEPGVSLN 209

Query: 538 NDMQVNG--GYQNQRFSNSVPAGGYRPPANAYDRTGQPTYAQPPPLYTNRGPIAKNEAPA 711
               VNG  G QN  F N +     RP  N+Y R  QP   QP P+Y NRGP  +N+AP 
Sbjct: 210 RPASVNGSSGEQNTSFRNPL-CETSRPVQNSYVRPPQPVNQQPSPMY-NRGPTGRNDAPP 267

Query: 712 RIIPIAALNPYR 747
           RIIPI+ALNPY+
Sbjct: 268 RIIPISALNPYQ 279


>ref|XP_003569087.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Brachypodium distachyon]
          Length = 945

 Score =  150 bits (380), Expect = 2e-34
 Identities = 95/261 (36%), Positives = 126/261 (48%), Gaps = 16/261 (6%)
 Frame = +1

Query: 13  QNTAERYRMMLSDGTHTQQAMLATQMNPIVKSGALQKGSIVRLNEFICNVIQGRRIIIVI 192
           Q  +ERYRM++SDG ++QQ+MLAT +N +VK G L+ GSIV L E +CN IQ RRIIIV 
Sbjct: 43  QQQSERYRMLISDGVNSQQSMLATPLNALVKDGTLRAGSIVHLVETMCNTIQNRRIIIVT 102

Query: 193 NLEVIVSKHDIIGEPKQYD------------TAAAGSQLRAPVSAQPSGMNQSSIP---- 324
            L+V+ ++  +IG PK                A+A        S  P  +  S  P    
Sbjct: 103 KLDVLQTECPMIGTPKMCQMKILPQEQEPNLPASAAQTYSGSYSGNPGMLGSSVAPMVEQ 162

Query: 325 AGNPQSYXXXXXXXXXXXQNVAGRSSMYTNAESVTNPXXXXXXXXXXXXXXRNMNNINSH 504
           A N  SY            +  GR+           P              +N  N N  
Sbjct: 163 AANSLSYGGPYKGIHGTVGSSIGRA-------VEPGPNNVLSGGSYGTVPAQNTMNANVV 215

Query: 505 YPRAEQGGGASNDMQVNGGYQNQRFSNSVPAGGYRPPANAYDRTGQPTYAQPPPLYTNRG 684
            P         + + +   +QNQRF+      G+ PP N Y R  QP+Y QPPP Y N G
Sbjct: 216 QP--------DSQLPLLSSHQNQRFAIPGAGRGFGPPGNIYGRPAQPSYQQPPPAYRNSG 267

Query: 685 PIAKNEAPARIIPIAALNPYR 747
           P+AKNEAP R+ PI+ALNPY+
Sbjct: 268 PVAKNEAPPRVTPISALNPYQ 288


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