BLASTX nr result

ID: Dioscorea21_contig00030956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030956
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...   123   1e-26
emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group]        122   2e-26
ref|XP_002444793.1| hypothetical protein SORBIDRAFT_07g028153 [S...   122   4e-26
ref|NP_001064098.1| Os10g0130700 [Oryza sativa Japonica Group] g...   121   7e-26
emb|CAH66624.1| OSIGBa0115A19.5 [Oryza sativa Indica Group]           121   7e-26

>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/89 (61%), Positives = 71/89 (79%)
 Frame = +3

Query: 3   RSDRGGEFLSKEFQDYCDKAGIKRELTAPYTPQQNGIVERKNRTVIEMARGLLRSGGLPL 182
           R+DRGGEF S++FQDYC+  GI+R LTAPYTPQQNG+VER+NRT++EM R +L++  +P 
Sbjct: 460 RTDRGGEFTSRDFQDYCNNNGIRRHLTAPYTPQQNGVVERRNRTLMEMTRSMLKAMNVPN 519

Query: 183 KFWGESVSTAVHLINRSPTLVLRNLTPYE 269
             WGE+V  A +LINR PT  L+N TPYE
Sbjct: 520 YMWGEAVRHATYLINRVPTRALKNQTPYE 548


>emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group]
          Length = 1425

 Score =  122 bits (307), Expect = 2e-26
 Identities = 54/89 (60%), Positives = 71/89 (79%)
 Frame = +3

Query: 3   RSDRGGEFLSKEFQDYCDKAGIKRELTAPYTPQQNGIVERKNRTVIEMARGLLRSGGLPL 182
           R+DRGGEF S EF DYC   G++RELTAPY+PQQN +VER+N+TV+  AR +L++ GLP 
Sbjct: 643 RTDRGGEFTSVEFMDYCTDRGMRRELTAPYSPQQNRVVERRNQTVVAAARSMLKAAGLPA 702

Query: 183 KFWGESVSTAVHLINRSPTLVLRNLTPYE 269
           +FWGE+V  AV+++NRSPT  L  +TPYE
Sbjct: 703 RFWGEAVVAAVYVLNRSPTKALDGVTPYE 731


>ref|XP_002444793.1| hypothetical protein SORBIDRAFT_07g028153 [Sorghum bicolor]
            gi|241941143|gb|EES14288.1| hypothetical protein
            SORBIDRAFT_07g028153 [Sorghum bicolor]
          Length = 1288

 Score =  122 bits (305), Expect = 4e-26
 Identities = 54/89 (60%), Positives = 69/89 (77%)
 Frame = +3

Query: 3    RSDRGGEFLSKEFQDYCDKAGIKRELTAPYTPQQNGIVERKNRTVIEMARGLLRSGGLPL 182
            R+D GGEF   EF  YC   GIKR  +APY+PQQNG+VER+N+TV+ MAR LL+   +P 
Sbjct: 753  RTDNGGEFTVAEFTAYCADEGIKRHFSAPYSPQQNGVVERRNQTVVAMARALLKQRQMPS 812

Query: 183  KFWGESVSTAVHLINRSPTLVLRNLTPYE 269
            +FWGE+V TAVH++NRSPT  L+N+TPYE
Sbjct: 813  RFWGEAVMTAVHILNRSPTKALKNVTPYE 841


>ref|NP_001064098.1| Os10g0130700 [Oryza sativa Japonica Group]
           gi|20514806|gb|AAM23251.1|AC092553_17 Putative pol
           polyprotein [Oryza sativa Japonica Group]
           gi|21326494|gb|AAM47622.1|AC122147_11 Putative pol
           polyprotein [Oryza sativa Japonica Group]
           gi|31430018|gb|AAP51989.1| retrotransposon protein,
           putative, Ty1-copia subclass, expressed [Oryza sativa
           Japonica Group] gi|113638707|dbj|BAF26012.1|
           Os10g0130700 [Oryza sativa Japonica Group]
          Length = 1426

 Score =  121 bits (303), Expect = 7e-26
 Identities = 53/89 (59%), Positives = 71/89 (79%)
 Frame = +3

Query: 3   RSDRGGEFLSKEFQDYCDKAGIKRELTAPYTPQQNGIVERKNRTVIEMARGLLRSGGLPL 182
           R+DRGGEF S EF DYC   G++RELTAPY+PQQNG+VER+N+TV+  AR +L++ G+P 
Sbjct: 643 RTDRGGEFTSVEFMDYCADHGMRRELTAPYSPQQNGVVERRNQTVVAAARSMLKAAGMPA 702

Query: 183 KFWGESVSTAVHLINRSPTLVLRNLTPYE 269
            FWGE+V  AV+++NRSPT  L  +TP+E
Sbjct: 703 CFWGEAVVAAVYVLNRSPTKALNGVTPHE 731


>emb|CAH66624.1| OSIGBa0115A19.5 [Oryza sativa Indica Group]
          Length = 1426

 Score =  121 bits (303), Expect = 7e-26
 Identities = 53/89 (59%), Positives = 71/89 (79%)
 Frame = +3

Query: 3   RSDRGGEFLSKEFQDYCDKAGIKRELTAPYTPQQNGIVERKNRTVIEMARGLLRSGGLPL 182
           R+DRGGEF S EF DYC   G++RELTAPY+PQQNG+VER+N+TV+  AR +L++ G+P 
Sbjct: 643 RTDRGGEFTSVEFMDYCADHGMRRELTAPYSPQQNGVVERRNQTVVAAARSMLKAAGMPA 702

Query: 183 KFWGESVSTAVHLINRSPTLVLRNLTPYE 269
            FWGE+V  AV+++NRSPT  L  +TP+E
Sbjct: 703 CFWGEAVVAAVYVLNRSPTKALNGVTPHE 731


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