BLASTX nr result

ID: Dioscorea21_contig00030932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030932
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW78845.1| hypothetical protein ZEAMMB73_852154 [Zea mays]         64   1e-08
ref|XP_002441396.1| hypothetical protein SORBIDRAFT_09g025880 [S...    64   1e-08
gb|ACN34763.1| unknown [Zea mays] gi|413946197|gb|AFW78846.1| hy...    64   1e-08
dbj|BAK07937.1| predicted protein [Hordeum vulgare subsp. vulgare]     63   2e-08
ref|XP_003568083.1| PREDICTED: periodic tryptophan protein 2-lik...    62   4e-08

>gb|AFW78845.1| hypothetical protein ZEAMMB73_852154 [Zea mays]
          Length = 885

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
 Frame = +2

Query: 8   KSYGGSKKPYMFLGHRESIVGAFFAREKNDNAYR-VYTISKDGAVFTWKLDESQHLDDS 181
           K  GG  KP++FLGHR ++VGAFFA +K     + VYT+SKDGA+FTW L E    +D+
Sbjct: 173 KGLGG--KPFLFLGHRAAVVGAFFATDKKTRRVKGVYTVSKDGAIFTWDLVEGNEENDT 229


>ref|XP_002441396.1| hypothetical protein SORBIDRAFT_09g025880 [Sorghum bicolor]
           gi|241946681|gb|EES19826.1| hypothetical protein
           SORBIDRAFT_09g025880 [Sorghum bicolor]
          Length = 883

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
 Frame = +2

Query: 17  GGSKKPYMFLGHRESIVGAFFAREKNDNAYR-VYTISKDGAVFTWKLDESQHLDDS 181
           G   KP++FLGHR ++VGAFFA +K     + VYT+SKDGA+FTW L E    +D+
Sbjct: 174 GLGSKPFLFLGHRAAVVGAFFATDKKTGRVKGVYTVSKDGAIFTWNLVEGNEENDT 229


>gb|ACN34763.1| unknown [Zea mays] gi|413946197|gb|AFW78846.1| hypothetical protein
           ZEAMMB73_852154 [Zea mays]
          Length = 758

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
 Frame = +2

Query: 8   KSYGGSKKPYMFLGHRESIVGAFFAREKNDNAYR-VYTISKDGAVFTWKLDESQHLDDS 181
           K  GG  KP++FLGHR ++VGAFFA +K     + VYT+SKDGA+FTW L E    +D+
Sbjct: 173 KGLGG--KPFLFLGHRAAVVGAFFATDKKTRRVKGVYTVSKDGAIFTWDLVEGNEENDT 229


>dbj|BAK07937.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 876

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/49 (57%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
 Frame = +2

Query: 17  GGSKKPYMFLGHRESIVGAFFARE-KNDNAYRVYTISKDGAVFTWKLDE 160
           G   KP++FLGHR ++VGAFFA + K+   + VYT+SKDGA+FTW L E
Sbjct: 174 GTGNKPFLFLGHRAAVVGAFFATDKKSGRVHGVYTVSKDGAIFTWNLVE 222


>ref|XP_003568083.1| PREDICTED: periodic tryptophan protein 2-like [Brachypodium
           distachyon]
          Length = 881

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
 Frame = +2

Query: 8   KSYGGSKKPYMFLGHRESIVGAFFARE-KNDNAYRVYTISKDGAVFTWKLDE 160
           K  GG  KP++FLGHR ++VGAFFA + K    + VYT+SKDGA+FTW L E
Sbjct: 173 KGLGG--KPFLFLGHRAAVVGAFFATDKKTGRVHGVYTVSKDGAIFTWNLVE 222


Top