BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030929
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516123.1| 40S ribosomal protein S3, putative [Ricinus ...    80   7e-20
ref|NP_001060243.1| Os07g0608500 [Oryza sativa Japonica Group] g...    77   5e-19
gb|ACF06499.1| ribosomal protein [Elaeis guineensis]                   79   7e-19
ref|XP_004141068.1| PREDICTED: 40S ribosomal protein S3-3-like [...    79   9e-19
ref|XP_003535989.1| PREDICTED: 40S ribosomal protein S3-3-like [...    79   9e-19

>ref|XP_002516123.1| 40S ribosomal protein S3, putative [Ricinus communis]
           gi|223544609|gb|EEF46125.1| 40S ribosomal protein S3,
           putative [Ricinus communis]
          Length = 234

 Score = 80.1 bits (196), Expect(2) = 7e-20
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 FPDNSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 1
           FPDNSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 79  FPDNSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117



 Score = 42.0 bits (97), Expect(2) = 7e-20
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = -3

Query: 176 IGERGRRIR*LTSVVQKRFNFP 111
           +GE+GRRIR LTSVVQKRFNFP
Sbjct: 59  LGEKGRRIRELTSVVQKRFNFP 80


>ref|NP_001060243.1| Os07g0608500 [Oryza sativa Japonica Group]
           gi|14192875|gb|AAK55780.1|AC079038_14 Putative 40S
           ribosomal protein; contains C-terminal domain [Oryza
           sativa] gi|34394183|dbj|BAC84635.1| putative 40S
           ribosomal protein [Oryza sativa Japonica Group]
           gi|50509862|dbj|BAD32034.1| putative 40S ribosomal
           protein [Oryza sativa Japonica Group]
           gi|113611779|dbj|BAF22157.1| Os07g0608500 [Oryza sativa
           Japonica Group] gi|125559132|gb|EAZ04668.1| hypothetical
           protein OsI_26820 [Oryza sativa Indica Group]
           gi|125601033|gb|EAZ40609.1| hypothetical protein
           OsJ_25071 [Oryza sativa Japonica Group]
           gi|215694983|dbj|BAG90174.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 233

 Score = 77.0 bits (188), Expect(2) = 5e-19
 Identities = 37/39 (94%), Positives = 38/39 (97%)
 Frame = -2

Query: 117 FPDNSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 1
           FP+N VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 81  FPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 119



 Score = 42.0 bits (97), Expect(2) = 5e-19
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = -3

Query: 176 IGERGRRIR*LTSVVQKRFNFP 111
           +GE+GRRIR LTSVVQKRFNFP
Sbjct: 61  LGEKGRRIRELTSVVQKRFNFP 82


>gb|ACF06499.1| ribosomal protein [Elaeis guineensis]
          Length = 235

 Score = 78.6 bits (192), Expect(2) = 7e-19
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 FPDNSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 1
           FP+NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 79  FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117



 Score = 40.0 bits (92), Expect(2) = 7e-19
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = -3

Query: 176 IGERGRRIR*LTSVVQKRFNFP 111
           +GE+GRRIR LTSVVQKRF+FP
Sbjct: 59  LGEKGRRIRELTSVVQKRFSFP 80


>ref|XP_004141068.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
           gi|449488075|ref|XP_004157933.1| PREDICTED: 40S
           ribosomal protein S3-3-like [Cucumis sativus]
          Length = 243

 Score = 78.6 bits (192), Expect(2) = 9e-19
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 FPDNSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 1
           FP+NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 79  FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117



 Score = 39.7 bits (91), Expect(2) = 9e-19
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -3

Query: 176 IGERGRRIR*LTSVVQKRFNFP 111
           +GE+GRRIR LTSVVQKRF FP
Sbjct: 59  LGEKGRRIRELTSVVQKRFKFP 80


>ref|XP_003535989.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
          Length = 239

 Score = 78.6 bits (192), Expect(2) = 9e-19
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 FPDNSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 1
           FP+NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 79  FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117



 Score = 39.7 bits (91), Expect(2) = 9e-19
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -3

Query: 176 IGERGRRIR*LTSVVQKRFNFP 111
           +GE+GRRIR LTSVVQKRF FP
Sbjct: 59  LGEKGRRIRELTSVVQKRFKFP 80