BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030916
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81086.1| hypothetical protein VITISV_027167 [Vitis vinifera]   135   3e-30
ref|XP_003634341.1| PREDICTED: pentatricopeptide repeat-containi...   133   2e-29
emb|CBI40755.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
ref|XP_003589765.1| Pentatricopeptide repeat-containing protein ...   119   2e-25

>emb|CAN81086.1| hypothetical protein VITISV_027167 [Vitis vinifera]
          Length = 1756

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/103 (62%), Positives = 79/103 (76%)
 Frame = -3

Query: 310  VFERLANPNIFCWNSMILGCSKSRGVVRALELFNEMPERDVISWNTMISVLVKHGRPKET 131
            VF R +NP++FCWNSMI G SK   V +ALELF +MPERD +SWNTMIS+L +HG   ET
Sbjct: 1574 VFCRTSNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAET 1633

Query: 130  LLMIIEMQAKGYAPDSTTYTSVLSACTSIPDVGWGRHLHARII 2
            L M +EM  +G+ P+S TY SVLSACT+I D+ WG HLHARI+
Sbjct: 1634 LNMFLEMWKQGFRPNSMTYASVLSACTNIYDLEWGAHLHARIV 1676


>ref|XP_003634341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 767

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/103 (62%), Positives = 77/103 (74%)
 Frame = -3

Query: 310 VFERLANPNIFCWNSMILGCSKSRGVVRALELFNEMPERDVISWNTMISVLVKHGRPKET 131
           VF R  NP++FCWNSMI G SK   V +ALELF +MPERD +SWNTMIS+L +HG   ET
Sbjct: 184 VFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAET 243

Query: 130 LLMIIEMQAKGYAPDSTTYTSVLSACTSIPDVGWGRHLHARII 2
           L   +EM  +G+ P+S TY SVLSACTSI D+ WG HLHARI+
Sbjct: 244 LNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIV 286



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/100 (34%), Positives = 60/100 (60%)
 Frame = -3

Query: 307 FERLANPNIFCWNSMILGCSKSRGVVRALELFNEMPERDVISWNTMISVLVKHGRPKETL 128
           FE +   +I  W +MI   S++  V +A E F++MPER+VISWN+M++  ++ G  +E L
Sbjct: 418 FELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGL 477

Query: 127 LMIIEMQAKGYAPDSTTYTSVLSACTSIPDVGWGRHLHAR 8
            + I+M  +G   D  T+++ +SAC  +  +  G  + A+
Sbjct: 478 KVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQ 517



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
 Frame = -3

Query: 310 VFERLANPNIFCWNSMILGCSKSRGVVRALELFNEMPERDVISWNTMISVLVKHGRPKET 131
           VF  +  PN++ WN+MI G + S  +  A +LF +MPERD +SWN+M+S    +G  + T
Sbjct: 51  VFGGIMFPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEAT 110

Query: 130 LLMIIEM-QAKGYAPDSTTYTSVLSACTSIPDVGWGRHLH 14
           + + + M +     PD  +++ V+ A  S+  +     LH
Sbjct: 111 IKVFVSMVRDCCCVPDPFSFSCVMKASGSLGYLKLALQLH 150


>emb|CBI40755.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/103 (62%), Positives = 77/103 (74%)
 Frame = -3

Query: 310 VFERLANPNIFCWNSMILGCSKSRGVVRALELFNEMPERDVISWNTMISVLVKHGRPKET 131
           VF R  NP++FCWNSMI G SK   V +ALELF +MPERD +SWNTMIS+L +HG   ET
Sbjct: 171 VFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAET 230

Query: 130 LLMIIEMQAKGYAPDSTTYTSVLSACTSIPDVGWGRHLHARII 2
           L   +EM  +G+ P+S TY SVLSACTSI D+ WG HLHARI+
Sbjct: 231 LNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIV 273



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/100 (34%), Positives = 60/100 (60%)
 Frame = -3

Query: 307 FERLANPNIFCWNSMILGCSKSRGVVRALELFNEMPERDVISWNTMISVLVKHGRPKETL 128
           FE +   +I  W +MI   S++  V +A E F++MPER+VISWN+M++  ++ G  +E L
Sbjct: 405 FELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGL 464

Query: 127 LMIIEMQAKGYAPDSTTYTSVLSACTSIPDVGWGRHLHAR 8
            + I+M  +G   D  T+++ +SAC  +  +  G  + A+
Sbjct: 465 KVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQ 504



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 13/96 (13%)
 Frame = -3

Query: 310 VFERLANPNIFCWNSMILGCSKSRGVVRALELFNEMPERDVISWNTMISVLVKHGRPKET 131
           VF  +  PN++ WN+MI G + S  +  A +LF +MPERD +SWN+M+S    +G  + T
Sbjct: 61  VFGGIMFPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEAT 120

Query: 130 L-------LMIIEMQAKGYAP------DSTTYTSVL 62
           +        + + +Q  G+A       D+   TSVL
Sbjct: 121 IKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVL 156


>ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/102 (53%), Positives = 72/102 (70%)
 Frame = -3

Query: 307 FERLANPNIFCWNSMILGCSKSRGVVRALELFNEMPERDVISWNTMISVLVKHGRPKETL 128
           F R+ NP I C NSM++G +KS GV  ALE+F  MPERDV+SWN +IS L K GR +E L
Sbjct: 217 FSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREAL 276

Query: 127 LMIIEMQAKGYAPDSTTYTSVLSACTSIPDVGWGRHLHARII 2
            M+++M  KG  PDSTTYTS L+AC  +  + WG+ LH ++I
Sbjct: 277 DMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVI 318



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
 Frame = -3

Query: 310 VFERLANPNIFCWNSMILGCSKSRGVVRALELFNEMPERDVISWNTMISVLVKHGRPKET 131
           +F  +A  +I  W  MI   S+   + +A E F++M  R+VI+WN M+   ++HG  ++ 
Sbjct: 449 IFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDG 508

Query: 130 LLMIIEM-QAKGYAPDSTTYTSVLSACTSI 44
           L M  +M   K   PD  TY ++   C  I
Sbjct: 509 LKMYSDMLTEKDVIPDWVTYVTLFRGCADI 538



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
 Frame = -3

Query: 304 ERLANPNIFCWNSMILGCSKSRGVVRALELFNEMPERDVISWNTMISVLVKHGRPKETLL 125
           + +  PN+   N M+ G +K   +  A+ELF  MP RDV SWNT++S   + G+    L 
Sbjct: 85  DEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALD 144

Query: 124 MIIEMQAKGYA-PDSTTYTSVLSACTSIPDVGW 29
           + + M+  G + P++ T+  V+ +C ++   GW
Sbjct: 145 IFVSMRQTGDSLPNAFTFGCVMKSCGAL---GW 174


>ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355478813|gb|AES60016.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  119 bits (299), Expect = 2e-25
 Identities = 54/103 (52%), Positives = 73/103 (70%)
 Frame = -3

Query: 310 VFERLANPNIFCWNSMILGCSKSRGVVRALELFNEMPERDVISWNTMISVLVKHGRPKET 131
           VF  +  P++FCWNSMI G S+  G  +AL++FN MPERD +SWNT+IS+  +HG   + 
Sbjct: 203 VFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQC 262

Query: 130 LLMIIEMQAKGYAPDSTTYTSVLSACTSIPDVGWGRHLHARII 2
           L M +EM  +G++P+  TY SVLSAC S  D+ WG HLHARI+
Sbjct: 263 LAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARIL 305



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/95 (33%), Positives = 55/95 (57%)
 Frame = -3

Query: 310 VFERLANPNIFCWNSMILGCSKSRGVVRALELFNEMPERDVISWNTMISVLVKHGRPKET 131
           VF  +   N   W +MI   S+S  + +A   F+ MPER++++WN+M+S  V++G  +E 
Sbjct: 436 VFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEG 495

Query: 130 LLMIIEMQAKGYAPDSTTYTSVLSACTSIPDVGWG 26
           L + + M++ G  PD  T+T+ + AC  +  V  G
Sbjct: 496 LKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLG 530



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 43/108 (39%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
 Frame = -3

Query: 310 VFERLANPNIFCWNSMILGCSKSRGVVRALELFNEMPER--DVISWNTMISVLVK---HG 146
           VF+   + NIF WN+MI     S  +  A +LF+EMP R  D +SW TMIS   +   H 
Sbjct: 65  VFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHS 124

Query: 145 RPKETL-LMIIEMQAKGYAPDSTTYTSVLSACTSIPDVGWGRHLHARI 5
           R  ET  LMI +    G   D  ++TSV+ AC S+ D      LHA +
Sbjct: 125 RSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALV 172