BLASTX nr result

ID: Dioscorea21_contig00030898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030898
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8H252.1|RBR_COCNU RecName: Full=Retinoblastoma-related prote...   182   3e-44
emb|CBI20795.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-li...   170   1e-40
ref|XP_002529988.1| conserved hypothetical protein [Ricinus comm...   167   6e-40
sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related prote...   160   1e-37

>sp|Q8H252.1|RBR_COCNU RecName: Full=Retinoblastoma-related protein
           gi|23429044|gb|AAM77469.1| retinoblastoma-like protein
           [Cocos nucifera]
          Length = 1011

 Score =  182 bits (461), Expect = 3e-44
 Identities = 96/125 (76%), Positives = 103/125 (82%), Gaps = 1/125 (0%)
 Frame = +1

Query: 1   ARPALAAEINRLGLLAEPMPSLDAISIHYNIPNGNLPPLPFQKRETSTDQNGDA-SPKAV 177
           ARP LAAEINRLGLLAEPMPSLDAI++H NI  G LPPLPFQK E S+DQNG A SPK  
Sbjct: 615 ARPTLAAEINRLGLLAEPMPSLDAIAVHNNISTGGLPPLPFQKHEHSSDQNGGAVSPKRA 674

Query: 178 SNEQRIVLVERNSFASPVKERLLSFNSLKSKLPPLQSAFASPTRPNPPGEGETYAETGIN 357
            +E R VLVERNSF SPVKE  L+ N LKSKLPPLQSAFASPTRPNP G GET AETGIN
Sbjct: 675 CSEYRSVLVERNSFTSPVKELTLTLN-LKSKLPPLQSAFASPTRPNPAGGGETCAETGIN 733

Query: 358 VFFSK 372
           +FF+K
Sbjct: 734 IFFNK 738


>emb|CBI20795.3| unnamed protein product [Vitis vinifera]
          Length = 1006

 Score =  170 bits (431), Expect = 1e-40
 Identities = 93/128 (72%), Positives = 103/128 (80%), Gaps = 4/128 (3%)
 Frame = +1

Query: 1   ARPALAAEINRLGLLAEPMPSLDAISIHYNIPNGNLPPLP-FQKRETSTDQNGD-ASPKA 174
           AR AL+AE+NRLGLLAEPMPSLDAIS+H N   G LPP+P  QKRE+S  QNGD  SPK 
Sbjct: 606 ARAALSAEVNRLGLLAEPMPSLDAISMHINASCGGLPPVPSLQKRESSPGQNGDIRSPKR 665

Query: 175 VSNEQRIVLVERNSFASPVKERLLSFNSLKSKL--PPLQSAFASPTRPNPPGEGETYAET 348
           V  + R VLVERNSF SPVK+R L+ N+LKSKL  PPLQSAFASPTRPNP  EGET AET
Sbjct: 666 VCPDYRSVLVERNSFTSPVKDRFLALNNLKSKLPPPPLQSAFASPTRPNPGREGETCAET 725

Query: 349 GINVFFSK 372
           GIN+FFSK
Sbjct: 726 GINIFFSK 733


>ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera]
           gi|254789791|sp|A7P514.1|RBR_VITVI RecName:
           Full=Retinoblastoma-related protein
           gi|359392418|gb|AEV45768.1| RBR protein [Vitis
           pseudoreticulata]
          Length = 1007

 Score =  170 bits (431), Expect = 1e-40
 Identities = 93/128 (72%), Positives = 103/128 (80%), Gaps = 4/128 (3%)
 Frame = +1

Query: 1   ARPALAAEINRLGLLAEPMPSLDAISIHYNIPNGNLPPLP-FQKRETSTDQNGD-ASPKA 174
           AR AL+AE+NRLGLLAEPMPSLDAIS+H N   G LPP+P  QKRE+S  QNGD  SPK 
Sbjct: 607 ARAALSAEVNRLGLLAEPMPSLDAISMHINASCGGLPPVPSLQKRESSPGQNGDIRSPKR 666

Query: 175 VSNEQRIVLVERNSFASPVKERLLSFNSLKSKL--PPLQSAFASPTRPNPPGEGETYAET 348
           V  + R VLVERNSF SPVK+R L+ N+LKSKL  PPLQSAFASPTRPNP  EGET AET
Sbjct: 667 VCPDYRSVLVERNSFTSPVKDRFLALNNLKSKLPPPPLQSAFASPTRPNPGREGETCAET 726

Query: 349 GINVFFSK 372
           GIN+FFSK
Sbjct: 727 GINIFFSK 734


>ref|XP_002529988.1| conserved hypothetical protein [Ricinus communis]
            gi|254789790|sp|B9SVG9.1|RBR_RICCO RecName:
            Full=Retinoblastoma-related protein
            gi|223530511|gb|EEF32393.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1020

 Score =  167 bits (424), Expect = 6e-40
 Identities = 91/128 (71%), Positives = 101/128 (78%), Gaps = 4/128 (3%)
 Frame = +1

Query: 1    ARPALAAEINRLGLLAEPMPSLDAISIHYNIPNGNLPPL-PFQKRETSTDQNGD-ASPKA 174
            ARP+L+AEINRLGLLAEPMPSLDAI++H N  +G LPPL    K E S  QNGD  SPK 
Sbjct: 619  ARPSLSAEINRLGLLAEPMPSLDAIAVHINFSSGGLPPLSSVSKHEISPGQNGDIRSPKR 678

Query: 175  VSNEQRIVLVERNSFASPVKERLLSFNSLKSKL--PPLQSAFASPTRPNPPGEGETYAET 348
               + R VLVERNSF SPVK+RLL+F +LKSKL  PPLQSAFASPTRPNP G GET AET
Sbjct: 679  PCTDYRSVLVERNSFTSPVKDRLLAFTNLKSKLPPPPLQSAFASPTRPNPGGGGETCAET 738

Query: 349  GINVFFSK 372
            GIN+FFSK
Sbjct: 739  GINIFFSK 746


>sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related protein
            gi|89111303|dbj|BAE80326.1| retinoblastoma related
            protein [Camellia sinensis]
          Length = 1025

 Score =  160 bits (404), Expect = 1e-37
 Identities = 91/128 (71%), Positives = 99/128 (77%), Gaps = 4/128 (3%)
 Frame = +1

Query: 1    ARPALAAEINRLGLLAEPMPSLDAISIHYNIPNGNLPPLP-FQKRETSTDQNGD-ASPKA 174
            ARPAL+AE NRL LLAEPMPSLDAI++H NI  G+LP LP  QK E    QNGD  SPK 
Sbjct: 626  ARPALSAETNRLCLLAEPMPSLDAIAMHMNITCGSLPCLPSLQKNEILLGQNGDIQSPKR 685

Query: 175  VSNEQRIVLVERNSFASPVKERLLSFNSLKSKLPP--LQSAFASPTRPNPPGEGETYAET 348
            +  E R VLVERNSF SPVK+RLL+FN+ KSKLPP  LQSAFASPTRPNP   GET AET
Sbjct: 686  LCTEYRSVLVERNSFTSPVKDRLLTFNTPKSKLPPPALQSAFASPTRPNPGAGGETCAET 745

Query: 349  GINVFFSK 372
             INVFFSK
Sbjct: 746  AINVFFSK 753


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