BLASTX nr result

ID: Dioscorea21_contig00030892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030892
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB08213.2| unnamed protein product [Oryza sativa Japonica G...   148   4e-34
emb|CAH67120.1| H0502G05.11 [Oryza sativa Indica Group]               147   9e-34
emb|CAD41628.3| OSJNBa0091D06.8 [Oryza sativa Japonica Group]         147   9e-34
gb|ABD63162.1| RNase H family protein [Asparagus officinalis]         145   3e-33
gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o...   144   7e-33

>dbj|BAB08213.2| unnamed protein product [Oryza sativa Japonica Group]
          Length = 2876

 Score =  148 bits (374), Expect = 4e-34
 Identities = 64/108 (59%), Positives = 85/108 (78%)
 Frame = -1

Query: 325  EKAAFKALLKEHIDCFAWTYSEMPGLDDEVAVHRLAIDPNATPVKQAPRKMKFDLEEKVI 146
            E+  +++ L E  DCFAWTY EMPGLD  VA H+LAIDP   PVKQ PR+++ + +++VI
Sbjct: 1802 EREDYRSFLMEFRDCFAWTYKEMPGLDSRVATHKLAIDPQFRPVKQPPRRLRPEFQDQVI 1861

Query: 145  EETKKLIEAGFIREEKYPDWIASIVPVKKKNGQIRICVDFRDLNKACP 2
             E  +LI  GFI+E +YP W+A+IVPV+KKNGQ+R+CVDFRDLN+ACP
Sbjct: 1862 AEVDRLINVGFIKEIQYPRWLANIVPVEKKNGQVRVCVDFRDLNRACP 1909


>emb|CAH67120.1| H0502G05.11 [Oryza sativa Indica Group]
          Length = 2933

 Score =  147 bits (371), Expect = 9e-34
 Identities = 62/108 (57%), Positives = 85/108 (78%)
 Frame = -1

Query: 325  EKAAFKALLKEHIDCFAWTYSEMPGLDDEVAVHRLAIDPNATPVKQAPRKMKFDLEEKVI 146
            E+  +++ L E+ DCF WTY EMPGLD  VA H+LAIDP   PVKQ PR+++ + +++VI
Sbjct: 1867 EREDYRSFLMEYRDCFTWTYKEMPGLDPRVATHKLAIDPQFRPVKQPPRRLRPEFQDQVI 1926

Query: 145  EETKKLIEAGFIREEKYPDWIASIVPVKKKNGQIRICVDFRDLNKACP 2
             E  +LI  GFI+E +YP W+A+I+PV+KKNGQ+R+CVDFRDLN+ACP
Sbjct: 1927 AEVDRLINVGFIKEIQYPRWLANIIPVEKKNGQVRVCVDFRDLNRACP 1974


>emb|CAD41628.3| OSJNBa0091D06.8 [Oryza sativa Japonica Group]
          Length = 2657

 Score =  147 bits (371), Expect = 9e-34
 Identities = 62/108 (57%), Positives = 85/108 (78%)
 Frame = -1

Query: 325  EKAAFKALLKEHIDCFAWTYSEMPGLDDEVAVHRLAIDPNATPVKQAPRKMKFDLEEKVI 146
            E+  +++ L E+ DCF WTY EMPGLD  VA H+LAIDP   PVKQ PR+++ + +++VI
Sbjct: 1787 EREDYRSFLMEYRDCFTWTYKEMPGLDPRVATHKLAIDPQFRPVKQPPRRLRPEFQDQVI 1846

Query: 145  EETKKLIEAGFIREEKYPDWIASIVPVKKKNGQIRICVDFRDLNKACP 2
             E  +LI  GFI+E +YP W+A+I+PV+KKNGQ+R+CVDFRDLN+ACP
Sbjct: 1847 AEVDRLINVGFIKEIQYPRWLANIIPVEKKNGQVRVCVDFRDLNRACP 1894


>gb|ABD63162.1| RNase H family protein [Asparagus officinalis]
          Length = 1189

 Score =  145 bits (366), Expect = 3e-33
 Identities = 63/108 (58%), Positives = 86/108 (79%)
 Frame = -1

Query: 325 EKAAFKALLKEHIDCFAWTYSEMPGLDDEVAVHRLAIDPNATPVKQAPRKMKFDLEEKVI 146
           EK    +L++E+ID FAW Y +MPGLD +VA+H L IDP+A PVKQ  R+ + ++ E + 
Sbjct: 136 EKEDLISLIREYIDVFAWNYEDMPGLDPKVAMHHLNIDPDAKPVKQQQRRFRPEIMESIE 195

Query: 145 EETKKLIEAGFIREEKYPDWIASIVPVKKKNGQIRICVDFRDLNKACP 2
            E KKLI++GF+REE++PDW+A+IVPV KKNG++RIC+DFRDLN ACP
Sbjct: 196 SEVKKLIDSGFVREEQHPDWVANIVPVPKKNGKVRICIDFRDLNAACP 243


>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1181

 Score =  144 bits (363), Expect = 7e-33
 Identities = 62/108 (57%), Positives = 85/108 (78%)
 Frame = -1

Query: 325 EKAAFKALLKEHIDCFAWTYSEMPGLDDEVAVHRLAIDPNATPVKQAPRKMKFDLEEKVI 146
           EK    +L++E+ID FAW Y +MPGLD +VA+HRL IDP+  PVKQ  R+ + ++ E + 
Sbjct: 640 EKENLISLIREYIDVFAWNYEDMPGLDPKVAMHRLNIDPDVKPVKQQQRRFRPEIMESIE 699

Query: 145 EETKKLIEAGFIREEKYPDWIASIVPVKKKNGQIRICVDFRDLNKACP 2
            E KKLI++GF+REE++PDW+A+IVPV KKNG++RIC+DFRDLN  CP
Sbjct: 700 SEVKKLIDSGFVREEQHPDWVANIVPVPKKNGKVRICIDFRDLNATCP 747


Top