BLASTX nr result
ID: Dioscorea21_contig00030860
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00030860 (340 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003638765.1| Regulator of nonsense transcripts-like prote... 54 1e-05 >ref|XP_003638765.1| Regulator of nonsense transcripts-like protein [Medicago truncatula] gi|355504700|gb|AES85903.1| Regulator of nonsense transcripts-like protein [Medicago truncatula] Length = 1644 Score = 54.3 bits (129), Expect = 1e-05 Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 13/116 (11%) Frame = +2 Query: 2 CLASMVEFFLNCLKLYQDHVGKELITLE-------------DFVRRNFLKNSTCLSQCLT 142 CL SM+ FF +C Y+ + E++ L DF+R FL + L C++ Sbjct: 384 CLISMIHFFKSCASDYKMFIENEILKLTKPDNKSYKLTSFLDFLRERFLPRADQLKDCIS 443 Query: 143 TLRTHLPSASVAEESSRDIVLLLDLLQEFNGLLRKNFTSSDLVEVFKSNSGLNSNS 310 L TH+P + E + +V L L+ F +L + SSD +++ SN + NS Sbjct: 444 MLCTHVPMCIILEHNYWKLVYLNAALESFQKMLFQENLSSDELKMLFSNLEMPVNS 499