BLASTX nr result

ID: Dioscorea21_contig00030860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030860
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638765.1| Regulator of nonsense transcripts-like prote...    54   1e-05

>ref|XP_003638765.1| Regulator of nonsense transcripts-like protein [Medicago
           truncatula] gi|355504700|gb|AES85903.1| Regulator of
           nonsense transcripts-like protein [Medicago truncatula]
          Length = 1644

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 13/116 (11%)
 Frame = +2

Query: 2   CLASMVEFFLNCLKLYQDHVGKELITLE-------------DFVRRNFLKNSTCLSQCLT 142
           CL SM+ FF +C   Y+  +  E++ L              DF+R  FL  +  L  C++
Sbjct: 384 CLISMIHFFKSCASDYKMFIENEILKLTKPDNKSYKLTSFLDFLRERFLPRADQLKDCIS 443

Query: 143 TLRTHLPSASVAEESSRDIVLLLDLLQEFNGLLRKNFTSSDLVEVFKSNSGLNSNS 310
            L TH+P   + E +   +V L   L+ F  +L +   SSD +++  SN  +  NS
Sbjct: 444 MLCTHVPMCIILEHNYWKLVYLNAALESFQKMLFQENLSSDELKMLFSNLEMPVNS 499


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