BLASTX nr result
ID: Dioscorea21_contig00030844
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00030844
(917 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containi... 258 1e-83
emb|CBI22243.3| unnamed protein product [Vitis vinifera] 258 1e-83
ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containi... 239 3e-76
ref|XP_004170804.1| PREDICTED: pentatricopeptide repeat-containi... 239 3e-76
ref|XP_002324070.1| predicted protein [Populus trichocarpa] gi|2... 237 4e-76
>ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 258 bits (658), Expect(2) = 1e-83
Identities = 123/164 (75%), Positives = 138/164 (84%)
Frame = +2
Query: 236 EMRKKSTKPNDITFVSVLVACSHAGMVEDGREYFKLMRTEYGIEPNVKHYGCMVDILGRA 415
EMRK +P++ITFV VLVACSHAG VE+GR+YF LMR EY IEPN++HYGCMVD+LGRA
Sbjct: 368 EMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRA 427
Query: 416 GHLEEAFEFVKDMKFEPNAIVWRTLLGACRIHGNVELGECANEELLKLRKGASGDYVLLS 595
G L EAF+F+ MK EPNAIVWRTLLGACRIHGNVELG AN +LLK+R SGDYVLLS
Sbjct: 428 GLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESGDYVLLS 487
Query: 596 NIYASMGEWDGVEKVRKLMDDRGVAKEAGCAQIEGENSELIRFL 727
NIYAS GEWDGVEKVRKLMDD GV KEAGC+ IEG+N L+ FL
Sbjct: 488 NIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIEGDNKALMHFL 531
Score = 79.3 bits (194), Expect(2) = 1e-83
Identities = 36/46 (78%), Positives = 42/46 (91%)
Frame = +1
Query: 1 GSIDKAFKVFRGMREKDVSTWNSIIGGLAFHGHAEESISLFEEMRK 138
GSI +A +VF+GMREKDVSTWNS++GGLAFHGHAE+SI LF EMRK
Sbjct: 326 GSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRK 371
Score = 47.0 bits (110), Expect(2) = 2e-09
Identities = 33/141 (23%), Positives = 63/141 (44%)
Frame = +2
Query: 233 EEMRKKSTKPNDITFVSVLVACSHAGMVEDGREYFKLMRTEYGIEPNVKHYGCMVDILGR 412
EEMR P+++T +S+L AC+ G ++ G+ + + +V ++D+ +
Sbjct: 265 EEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAK 324
Query: 413 AGHLEEAFEFVKDMKFEPNAIVWRTLLGACRIHGNVELGECANEELLKLRKGASGDYVLL 592
G + A E + M+ E + W ++LG HG+ E E+ KL+ D +
Sbjct: 325 CGSIVRALEVFQGMR-EKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLK--IRPDEITF 381
Query: 593 SNIYASMGEWDGVEKVRKLMD 655
+ + VE+ R+ D
Sbjct: 382 VGVLVACSHAGRVEEGRQYFD 402
Score = 41.6 bits (96), Expect(2) = 2e-09
Identities = 17/45 (37%), Positives = 30/45 (66%)
Frame = +1
Query: 1 GSIDKAFKVFRGMREKDVSTWNSIIGGLAFHGHAEESISLFEEMR 135
G ++ A K+F + ++DV TWN++I G G ++++ +FEEMR
Sbjct: 224 GEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMR 268
>emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 258 bits (658), Expect(2) = 1e-83
Identities = 123/164 (75%), Positives = 138/164 (84%)
Frame = +2
Query: 236 EMRKKSTKPNDITFVSVLVACSHAGMVEDGREYFKLMRTEYGIEPNVKHYGCMVDILGRA 415
EMRK +P++ITFV VLVACSHAG VE+GR+YF LMR EY IEPN++HYGCMVD+LGRA
Sbjct: 333 EMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRA 392
Query: 416 GHLEEAFEFVKDMKFEPNAIVWRTLLGACRIHGNVELGECANEELLKLRKGASGDYVLLS 595
G L EAF+F+ MK EPNAIVWRTLLGACRIHGNVELG AN +LLK+R SGDYVLLS
Sbjct: 393 GLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESGDYVLLS 452
Query: 596 NIYASMGEWDGVEKVRKLMDDRGVAKEAGCAQIEGENSELIRFL 727
NIYAS GEWDGVEKVRKLMDD GV KEAGC+ IEG+N L+ FL
Sbjct: 453 NIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIEGDNKALMHFL 496
Score = 79.3 bits (194), Expect(2) = 1e-83
Identities = 36/46 (78%), Positives = 42/46 (91%)
Frame = +1
Query: 1 GSIDKAFKVFRGMREKDVSTWNSIIGGLAFHGHAEESISLFEEMRK 138
GSI +A +VF+GMREKDVSTWNS++GGLAFHGHAE+SI LF EMRK
Sbjct: 291 GSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRK 336
Score = 47.0 bits (110), Expect(2) = 2e-09
Identities = 33/141 (23%), Positives = 63/141 (44%)
Frame = +2
Query: 233 EEMRKKSTKPNDITFVSVLVACSHAGMVEDGREYFKLMRTEYGIEPNVKHYGCMVDILGR 412
EEMR P+++T +S+L AC+ G ++ G+ + + +V ++D+ +
Sbjct: 230 EEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAK 289
Query: 413 AGHLEEAFEFVKDMKFEPNAIVWRTLLGACRIHGNVELGECANEELLKLRKGASGDYVLL 592
G + A E + M+ E + W ++LG HG+ E E+ KL+ D +
Sbjct: 290 CGSIVRALEVFQGMR-EKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLK--IRPDEITF 346
Query: 593 SNIYASMGEWDGVEKVRKLMD 655
+ + VE+ R+ D
Sbjct: 347 VGVLVACSHAGRVEEGRQYFD 367
Score = 41.6 bits (96), Expect(2) = 2e-09
Identities = 17/45 (37%), Positives = 30/45 (66%)
Frame = +1
Query: 1 GSIDKAFKVFRGMREKDVSTWNSIIGGLAFHGHAEESISLFEEMR 135
G ++ A K+F + ++DV TWN++I G G ++++ +FEEMR
Sbjct: 189 GEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMR 233
>ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 239 bits (610), Expect(2) = 3e-76
Identities = 114/165 (69%), Positives = 136/165 (82%)
Frame = +2
Query: 233 EEMRKKSTKPNDITFVSVLVACSHAGMVEDGREYFKLMRTEYGIEPNVKHYGCMVDILGR 412
+EM + KPN+ITFV+VLVACSHAG V +GR YF LM+ + IEPN+KHYGCMVDILGR
Sbjct: 367 QEMLRLKMKPNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGR 426
Query: 413 AGHLEEAFEFVKDMKFEPNAIVWRTLLGACRIHGNVELGECANEELLKLRKGASGDYVLL 592
AG L EAF+F+ M+ EPNAI+WRTLLGACR+HG+VELG ANE+LLK+RK SGDYVLL
Sbjct: 427 AGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYVLL 486
Query: 593 SNIYASMGEWDGVEKVRKLMDDRGVAKEAGCAQIEGENSELIRFL 727
SNIYAS GEWDGV+KVRKLMDD GV K+ G + I+ +NS L+ FL
Sbjct: 487 SNIYASQGEWDGVQKVRKLMDDGGVKKKVGHSLIDSDNSFLMHFL 531
Score = 73.2 bits (178), Expect(2) = 3e-76
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +1
Query: 1 GSIDKAFKVFRGMREKDVSTWNSIIGGLAFHGHAEESISLFEEM 132
GSI A +VF+GMR+KD S+WNSIIGGLA HGHAEESI+LF+EM
Sbjct: 326 GSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEM 369
Score = 45.4 bits (106), Expect(2) = 3e-08
Identities = 25/110 (22%), Positives = 57/110 (51%)
Frame = +2
Query: 233 EEMRKKSTKPNDITFVSVLVACSHAGMVEDGREYFKLMRTEYGIEPNVKHYGCMVDILGR 412
+ MR +P+D+T +S+L A + G +E G++ + + + +V ++D+ +
Sbjct: 265 DAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLSNALIDMYAK 324
Query: 413 AGHLEEAFEFVKDMKFEPNAIVWRTLLGACRIHGNVELGECANEELLKLR 562
G + A E + M+ + + W +++G +HG+ E +E+L+L+
Sbjct: 325 CGSIGNALEVFQGMR-KKDTSSWNSIIGGLALHGHAEESINLFQEMLRLK 373
Score = 39.3 bits (90), Expect(2) = 3e-08
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +1
Query: 1 GSIDKAFKVFRGMREKDVSTWNSIIGGLAFHGHAEESISLFEEMRKK 141
G +D A ++F M KD+ +WN +I A HG E++ LF+E+ KK
Sbjct: 193 GKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKK 239
>ref|XP_004170804.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like, partial [Cucumis sativus]
Length = 315
Score = 239 bits (610), Expect(2) = 3e-76
Identities = 114/165 (69%), Positives = 136/165 (82%)
Frame = +2
Query: 233 EEMRKKSTKPNDITFVSVLVACSHAGMVEDGREYFKLMRTEYGIEPNVKHYGCMVDILGR 412
+EM + KPN+ITFV+VLVACSHAG V +GR YF LM+ + IEPN+KHYGCMVDILGR
Sbjct: 140 QEMLRLKMKPNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGR 199
Query: 413 AGHLEEAFEFVKDMKFEPNAIVWRTLLGACRIHGNVELGECANEELLKLRKGASGDYVLL 592
AG L EAF+F+ M+ EPNAI+WRTLLGACR+HG+VELG ANE+LLK+RK SGDYVLL
Sbjct: 200 AGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYVLL 259
Query: 593 SNIYASMGEWDGVEKVRKLMDDRGVAKEAGCAQIEGENSELIRFL 727
SNIYAS GEWDGV+KVRKLMDD GV K+ G + I+ +NS L+ FL
Sbjct: 260 SNIYASQGEWDGVQKVRKLMDDGGVKKKVGHSLIDSDNSFLMHFL 304
Score = 73.2 bits (178), Expect(2) = 3e-76
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +1
Query: 1 GSIDKAFKVFRGMREKDVSTWNSIIGGLAFHGHAEESISLFEEM 132
GSI A +VF+GMR+KD S+WNSIIGGLA HGHAEESI+LF+EM
Sbjct: 99 GSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEM 142
Score = 45.4 bits (106), Expect(2) = 4e-07
Identities = 25/110 (22%), Positives = 57/110 (51%)
Frame = +2
Query: 233 EEMRKKSTKPNDITFVSVLVACSHAGMVEDGREYFKLMRTEYGIEPNVKHYGCMVDILGR 412
+ MR +P+D+T +S+L A + G +E G++ + + + +V ++D+ +
Sbjct: 38 DAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLSNALIDMYAK 97
Query: 413 AGHLEEAFEFVKDMKFEPNAIVWRTLLGACRIHGNVELGECANEELLKLR 562
G + A E + M+ + + W +++G +HG+ E +E+L+L+
Sbjct: 98 CGSIGNALEVFQGMR-KKDTSSWNSIIGGLALHGHAEESINLFQEMLRLK 146
Score = 35.4 bits (80), Expect(2) = 4e-07
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1
Query: 13 KAFKVFRGMREKDVSTWNSIIGGLAFHGHAEESISLFEEMR 135
KA K+F + +KDV TWN++I G +E++ +F+ MR
Sbjct: 1 KARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMR 41
>ref|XP_002324070.1| predicted protein [Populus trichocarpa] gi|222867072|gb|EEF04203.1|
predicted protein [Populus trichocarpa]
Length = 546
Score = 237 bits (605), Expect(2) = 4e-76
Identities = 113/160 (70%), Positives = 132/160 (82%)
Frame = +2
Query: 248 KSTKPNDITFVSVLVACSHAGMVEDGREYFKLMRTEYGIEPNVKHYGCMVDILGRAGHLE 427
K+ KPN+ITFV V+VACSHAG VE+GR YFKLMR Y IEPN+ H+GCMVD+LGRAG L
Sbjct: 373 KNIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGCMVDLLGRAGLLS 432
Query: 428 EAFEFVKDMKFEPNAIVWRTLLGACRIHGNVELGECANEELLKLRKGASGDYVLLSNIYA 607
EAFE + M+ EPNAI+WRTLLGACR+HGNVELG ANE LLKLR+ SGDYVLLSNIYA
Sbjct: 433 EAFELIAKMEIEPNAIIWRTLLGACRVHGNVELGRLANERLLKLRRDESGDYVLLSNIYA 492
Query: 608 SMGEWDGVEKVRKLMDDRGVAKEAGCAQIEGENSELIRFL 727
S GEWDG E+VRKLMDD GV KEAG + IE ++ +++FL
Sbjct: 493 SAGEWDGAEEVRKLMDDGGVRKEAGRSLIEADDRAVMQFL 532
Score = 74.7 bits (182), Expect(2) = 4e-76
Identities = 34/45 (75%), Positives = 40/45 (88%)
Frame = +1
Query: 1 GSIDKAFKVFRGMREKDVSTWNSIIGGLAFHGHAEESISLFEEMR 135
GSI+ A +VF+ MREKDV+TWNS+IGGLAFHGHAEESI LF EM+
Sbjct: 326 GSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAEESIKLFAEMQ 370
Score = 48.5 bits (114), Expect(2) = 4e-10
Identities = 27/97 (27%), Positives = 50/97 (51%)
Frame = +2
Query: 233 EEMRKKSTKPNDITFVSVLVACSHAGMVEDGREYFKLMRTEYGIEPNVKHYGCMVDILGR 412
EEMR P+++T +S+L AC+ G ++ GR+ + + +V +VD+ +
Sbjct: 265 EEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLHCSISEMTRGDLSVLLGNALVDMYAK 324
Query: 413 AGHLEEAFEFVKDMKFEPNAIVWRTLLGACRIHGNVE 523
G +E A + K M+ E + W +++G HG+ E
Sbjct: 325 CGSIEIALQVFKKMR-EKDVTTWNSVIGGLAFHGHAE 360
Score = 42.4 bits (98), Expect(2) = 4e-10
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +1
Query: 1 GSIDKAFKVFRGMREKDVSTWNSIIGGLAFHGHAEESISLFEEMR 135
G ++ A +F EKDV TWN++I G G +++ +FEEMR
Sbjct: 224 GEMENARTLFDEAPEKDVVTWNTMIAGYVLRGEQRQALEMFEEMR 268