BLASTX nr result

ID: Dioscorea21_contig00030839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030839
         (1241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   377   e-102
emb|CBI26570.3| unnamed protein product [Vitis vinifera]              369   e-100
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   365   2e-98
ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group] g...   362   1e-97
gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japo...   362   1e-97

>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
            chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  377 bits (967), Expect = e-102
 Identities = 189/248 (76%), Positives = 214/248 (86%)
 Frame = -3

Query: 1239 EDLGPMEDNAAFNFVNAVEDLLWAFERRATASWVLQLAIKKSIYRHNLFRVAEKDWGADF 1060
            E LGP+EDNAAFNFVNA+EDLLWAFE RATASWV QLA+K+SIYRH++FRVAEKDWGADF
Sbjct: 1186 EKLGPLEDNAAFNFVNALEDLLWAFELRATASWVFQLAVKRSIYRHDVFRVAEKDWGADF 1245

Query: 1059 RKLSGGAALVALTLWLDLMQDASLQGIPESPKSVVLITGGAEYNMVSLNKTLKVYLWEMG 880
            RK+S G+ALV LTLWLD MQDASLQG P SPKSVVLITG AEYNMVSLN TLK +LWEMG
Sbjct: 1246 RKMSAGSALVGLTLWLDHMQDASLQGYPLSPKSVVLITGTAEYNMVSLNSTLKAFLWEMG 1305

Query: 879  SPFLPCKTRDGLLVAKAHSLRMWLKDSSFCLDLELKDAISLPKTNSMKLTEGYFMRAGLV 700
            SPFLPCKTR GLLVAKAHSLRMWLKDSSFCLDLELKDA SLP++NSM+L EG F+R GLV
Sbjct: 1306 SPFLPCKTRSGLLVAKAHSLRMWLKDSSFCLDLELKDAPSLPESNSMQLMEGCFLRRGLV 1365

Query: 699  QAFNDIHEQLGQVRPKKFAQLALLPKETRDKVMKTQLERSREKLEKMRERGLVRARKPTK 520
             AF DI E+LG VRPKKFA+LALLP E RDKV++  +E  +EKLEKM+++  V+ R+  K
Sbjct: 1366 PAFKDITERLGDVRPKKFARLALLPDEKRDKVIRADIEGGKEKLEKMKKKVGVKRRR--K 1423

Query: 519  FRTRKFMR 496
               RKF+R
Sbjct: 1424 LVRRKFIR 1431


>emb|CBI26570.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score =  369 bits (948), Expect = e-100
 Identities = 189/256 (73%), Positives = 214/256 (83%), Gaps = 8/256 (3%)
 Frame = -3

Query: 1239 EDLGPMEDNAAFNFVNAVEDLLWAFERRATASWVLQLAIKKSIYRHNLFRVAEKDWGADF 1060
            E LGP+EDNAAFNFVNA+EDLLWAFE RATASWV QLA+K+SIYRH++FRVAEKDWGADF
Sbjct: 768  EKLGPLEDNAAFNFVNALEDLLWAFELRATASWVFQLAVKRSIYRHDVFRVAEKDWGADF 827

Query: 1059 RKLSGGAALVALTLWLDLMQ--------DASLQGIPESPKSVVLITGGAEYNMVSLNKTL 904
            RK+S G+ALV LTLWLD MQ        DASLQG P SPKSVVLITG AEYNMVSLN TL
Sbjct: 828  RKMSAGSALVGLTLWLDHMQAKYFYFWQDASLQGYPLSPKSVVLITGTAEYNMVSLNSTL 887

Query: 903  KVYLWEMGSPFLPCKTRDGLLVAKAHSLRMWLKDSSFCLDLELKDAISLPKTNSMKLTEG 724
            K +LWEMGSPFLPCKTR GLLVAKAHSLRMWLKDSSFCLDLELKDA SLP++NSM+L EG
Sbjct: 888  KAFLWEMGSPFLPCKTRSGLLVAKAHSLRMWLKDSSFCLDLELKDAPSLPESNSMQLMEG 947

Query: 723  YFMRAGLVQAFNDIHEQLGQVRPKKFAQLALLPKETRDKVMKTQLERSREKLEKMRERGL 544
             F+R GLV AF DI E+LG VRPKKFA+LALLP E RDKV++  +E  +EKLEKM+++  
Sbjct: 948  CFLRRGLVPAFKDITERLGDVRPKKFARLALLPDEKRDKVIRADIEGGKEKLEKMKKKVG 1007

Query: 543  VRARKPTKFRTRKFMR 496
            V+ R+  K   RKF+R
Sbjct: 1008 VKRRR--KLVRRKFIR 1021


>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  365 bits (936), Expect = 2e-98
 Identities = 189/268 (70%), Positives = 214/268 (79%), Gaps = 20/268 (7%)
 Frame = -3

Query: 1239 EDLGPMEDNAAFNFVNAVEDLLWAFERRATASWVLQLAIKKSIYRHNLFRVAEKDWGADF 1060
            E LGP+EDNAAFNFVNA+EDLLWAFE RATASWV QLA+K+SIYRH++FRVAEKDWGADF
Sbjct: 1218 EKLGPLEDNAAFNFVNALEDLLWAFELRATASWVFQLAVKRSIYRHDVFRVAEKDWGADF 1277

Query: 1059 RKLSGGAALVALTLWLDLMQ--------------------DASLQGIPESPKSVVLITGG 940
            RK+S G+ALV LTLWLD MQ                    DASLQG P SPKSVVLITG 
Sbjct: 1278 RKMSAGSALVGLTLWLDHMQASFLITIFVQLMEEYFYFWQDASLQGYPLSPKSVVLITGT 1337

Query: 939  AEYNMVSLNKTLKVYLWEMGSPFLPCKTRDGLLVAKAHSLRMWLKDSSFCLDLELKDAIS 760
            AEYNMVSLN TLK +LWEMGSPFLPCKTR GLLVAKAHSLRMWLKDSSFCLDLELKDA S
Sbjct: 1338 AEYNMVSLNSTLKAFLWEMGSPFLPCKTRSGLLVAKAHSLRMWLKDSSFCLDLELKDAPS 1397

Query: 759  LPKTNSMKLTEGYFMRAGLVQAFNDIHEQLGQVRPKKFAQLALLPKETRDKVMKTQLERS 580
            LP++NSM+L EG F+R GLV AF DI E+LG VRPKKFA+LALLP E RDKV++  +E  
Sbjct: 1398 LPESNSMQLMEGCFLRRGLVPAFKDITERLGDVRPKKFARLALLPDEKRDKVIRADIEGG 1457

Query: 579  REKLEKMRERGLVRARKPTKFRTRKFMR 496
            +EKLEKM+++  V+ R+  K   RKF+R
Sbjct: 1458 KEKLEKMKKKVGVKRRR--KLVRRKFIR 1483


>ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
            gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza
            sativa Japonica Group] gi|113595105|dbj|BAF18979.1|
            Os06g0199100 [Oryza sativa Japonica Group]
          Length = 1283

 Score =  362 bits (928), Expect = 1e-97
 Identities = 176/251 (70%), Positives = 213/251 (84%), Gaps = 1/251 (0%)
 Frame = -3

Query: 1239 EDLGPMEDNAAFNFVNAVEDLLWAFERRATASWVLQLAIKKSIYRHNLFRVAEKDWGADF 1060
            E LG +ED+A+ NFVNA+EDLLWAFERRATASW+ QLA+K+SIY HN+FRV EKDWGAD 
Sbjct: 1026 EKLGTLEDSASLNFVNALEDLLWAFERRATASWIFQLAVKRSIYHHNIFRVEEKDWGADL 1085

Query: 1059 RKLSGGAALVALTLWLDLMQDASLQGIPESPKSVVLITGGAEYNMVSLNKTLKVYLWEMG 880
            RKLS GAALVALTLWLD MQDASLQG PESPKS+VL+TG  EYNMVSL KT++ YL EMG
Sbjct: 1086 RKLSAGAALVALTLWLDQMQDASLQGAPESPKSIVLVTGEGEYNMVSLRKTIRAYLLEMG 1145

Query: 879  SPFLPCKTRDGLLVAKAHSLRMWLKDSSFCLDLELKDAISLPKTNSMKLTEGYFMRAGLV 700
            SPFLPC++R G  V KA+SL+MWLKDS FCLDLELKDA +LPKTNSMKLTEGYFMRAGLV
Sbjct: 1146 SPFLPCRSRSGRFVVKAYSLKMWLKDSPFCLDLELKDAPALPKTNSMKLTEGYFMRAGLV 1205

Query: 699  QAFNDIHEQLGQVRPKKFAQLALLPKETRDKVMKTQLERSREKLEKMRERGLVRARKPTK 520
              F DIHE+LG+V PKKF++LALL +E+RD+V+K  ++  +EKLEKM+++GL  A++  +
Sbjct: 1206 PVFKDIHERLGEVWPKKFSRLALLSEESRDEVIKADIKGRKEKLEKMKKQGLAIAKRSKR 1265

Query: 519  F-RTRKFMRRQ 490
              R  KF+++Q
Sbjct: 1266 GPRRGKFVKQQ 1276


>gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
          Length = 1443

 Score =  362 bits (928), Expect = 1e-97
 Identities = 176/251 (70%), Positives = 213/251 (84%), Gaps = 1/251 (0%)
 Frame = -3

Query: 1239 EDLGPMEDNAAFNFVNAVEDLLWAFERRATASWVLQLAIKKSIYRHNLFRVAEKDWGADF 1060
            E LG +ED+A+ NFVNA+EDLLWAFERRATASW+ QLA+K+SIY HN+FRV EKDWGAD 
Sbjct: 1186 EKLGTLEDSASLNFVNALEDLLWAFERRATASWIFQLAVKRSIYHHNIFRVEEKDWGADL 1245

Query: 1059 RKLSGGAALVALTLWLDLMQDASLQGIPESPKSVVLITGGAEYNMVSLNKTLKVYLWEMG 880
            RKLS GAALVALTLWLD MQDASLQG PESPKS+VL+TG  EYNMVSL KT++ YL EMG
Sbjct: 1246 RKLSAGAALVALTLWLDQMQDASLQGAPESPKSIVLVTGEGEYNMVSLRKTIRAYLLEMG 1305

Query: 879  SPFLPCKTRDGLLVAKAHSLRMWLKDSSFCLDLELKDAISLPKTNSMKLTEGYFMRAGLV 700
            SPFLPC++R G  V KA+SL+MWLKDS FCLDLELKDA +LPKTNSMKLTEGYFMRAGLV
Sbjct: 1306 SPFLPCRSRSGRFVVKAYSLKMWLKDSPFCLDLELKDAPALPKTNSMKLTEGYFMRAGLV 1365

Query: 699  QAFNDIHEQLGQVRPKKFAQLALLPKETRDKVMKTQLERSREKLEKMRERGLVRARKPTK 520
              F DIHE+LG+V PKKF++LALL +E+RD+V+K  ++  +EKLEKM+++GL  A++  +
Sbjct: 1366 PVFKDIHERLGEVWPKKFSRLALLSEESRDEVIKADIKGRKEKLEKMKKQGLAIAKRSKR 1425

Query: 519  F-RTRKFMRRQ 490
              R  KF+++Q
Sbjct: 1426 GPRRGKFVKQQ 1436


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