BLASTX nr result
ID: Dioscorea21_contig00030837
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00030837
(216 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat... 108 3e-22
ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat... 104 8e-21
ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago t... 101 7e-20
ref|XP_003597243.1| Pentatricopeptide repeat-containing protein ... 100 2e-19
ref|XP_002323645.1| predicted protein [Populus trichocarpa] gi|2... 99 3e-19
>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 108 bits (271), Expect = 3e-22
Identities = 49/71 (69%), Positives = 59/71 (83%)
Frame = +2
Query: 2 FTLVRVLTACSQLGDLRTGQWIHQYIEEKGMHKNVFVDTSLIDMYTKCGSMESARRVFDS 181
FT+VRVL+AC+QLGDL +G+WIH+ I E GM +NVFV TSL+DMY KCG+ME AR VFD
Sbjct: 214 FTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDG 273
Query: 182 MAEKDVVSWSA 214
M EKD+VSW A
Sbjct: 274 MPEKDIVSWGA 284
Score = 70.1 bits (170), Expect = 2e-10
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = +2
Query: 2 FTLVRVLTACSQLGDLRTGQWIHQYIEEKGMHKNVFVDTSLIDMYTKCGSMESARRVFDS 181
FT VL AC++L DL+ G IH + + G +VFV TSL+ +Y KCG +E A +VFD
Sbjct: 113 FTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDD 172
Query: 182 MAEKDVVSWSA 214
+ +K+VVSW+A
Sbjct: 173 IPDKNVVSWTA 183
Score = 68.9 bits (167), Expect = 4e-10
Identities = 32/71 (45%), Positives = 45/71 (63%)
Frame = +2
Query: 2 FTLVRVLTACSQLGDLRTGQWIHQYIEEKGMHKNVFVDTSLIDMYTKCGSMESARRVFDS 181
+T+V VL+AC++LG L G+W+ ++ N + T+LID+Y KCGSM A VF
Sbjct: 315 YTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKG 374
Query: 182 MAEKDVVSWSA 214
M EKD V W+A
Sbjct: 375 MKEKDRVVWNA 385
>ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 104 bits (259), Expect = 8e-21
Identities = 49/71 (69%), Positives = 56/71 (78%)
Frame = +2
Query: 2 FTLVRVLTACSQLGDLRTGQWIHQYIEEKGMHKNVFVDTSLIDMYTKCGSMESARRVFDS 181
FTLVR+L ACS++GDL +G+WI Y+ E G NVFV TSL+DMY KCGSME ARRVFD
Sbjct: 204 FTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDG 263
Query: 182 MAEKDVVSWSA 214
M EKDVV WSA
Sbjct: 264 MVEKDVVCWSA 274
Score = 58.5 bits (140), Expect = 5e-07
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = +2
Query: 2 FTLVRVLTACSQLGDLRTGQWIHQYIEEKGMHKNVFVDTSLIDMYTKCGSMESARRVFDS 181
+ +V V +ACS+LG L G W ++ N + T+LID Y KCGS+ A+ VF
Sbjct: 305 YAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKG 364
Query: 182 MAEKDVVSWSA 214
M KD V ++A
Sbjct: 365 MRRKDCVVFNA 375
Score = 56.6 bits (135), Expect = 2e-06
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +2
Query: 2 FTLVRVLTACSQLGD-LRTGQWIHQYIEEKGMHKNVFVDTSLIDMYTKCGSMESARRVFD 178
FT VL AC++L G +H + + G +VFV T L+ +Y+K G + AR+VFD
Sbjct: 102 FTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFD 161
Query: 179 SMAEKDVVSWSA 214
+ EK+VVSW+A
Sbjct: 162 EIPEKNVVSWTA 173
>ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 678
Score = 101 bits (251), Expect = 7e-20
Identities = 46/71 (64%), Positives = 57/71 (80%)
Frame = +2
Query: 2 FTLVRVLTACSQLGDLRTGQWIHQYIEEKGMHKNVFVDTSLIDMYTKCGSMESARRVFDS 181
F +VRVL AC++LGDL +G+WI + + E G+ +NVFV TSL+DMYTKCGSME AR VFD
Sbjct: 206 FVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDG 265
Query: 182 MAEKDVVSWSA 214
M EKD+V WSA
Sbjct: 266 MVEKDIVCWSA 276
Score = 60.1 bits (144), Expect = 2e-07
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = +2
Query: 2 FTLVRVLTACSQLGDLRTGQWIHQYIEEKGMHKNVFVDTSLIDMYTKCGSMESARRVFDS 181
FT VL AC++L G IH + + G +VFV T+++ Y+KCG + A +VFD
Sbjct: 105 FTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDD 164
Query: 182 MAEKDVVSWS 211
M K+VVSW+
Sbjct: 165 MVVKNVVSWT 174
Score = 57.8 bits (138), Expect = 9e-07
Identities = 29/71 (40%), Positives = 40/71 (56%)
Frame = +2
Query: 2 FTLVRVLTACSQLGDLRTGQWIHQYIEEKGMHKNVFVDTSLIDMYTKCGSMESARRVFDS 181
+ +V L++C+ LG L G W + + N + TSLID Y KCGSME A V+
Sbjct: 307 YAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKM 366
Query: 182 MAEKDVVSWSA 214
M EKD V ++A
Sbjct: 367 MKEKDRVVFNA 377
>ref|XP_003597243.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486291|gb|AES67494.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 509
Score = 100 bits (248), Expect = 2e-19
Identities = 46/71 (64%), Positives = 57/71 (80%)
Frame = +2
Query: 2 FTLVRVLTACSQLGDLRTGQWIHQYIEEKGMHKNVFVDTSLIDMYTKCGSMESARRVFDS 181
F +VRVL AC++LGDL +G+WI + + + G+ +NVFV TSL+DMYTKCGSME AR VFD
Sbjct: 132 FVIVRVLRACARLGDLDSGRWIDRCLRDCGLSRNVFVATSLVDMYTKCGSMEEARFVFDG 191
Query: 182 MAEKDVVSWSA 214
M EKDVV WSA
Sbjct: 192 MVEKDVVCWSA 202
Score = 58.5 bits (140), Expect = 5e-07
Identities = 26/70 (37%), Positives = 43/70 (61%)
Frame = +2
Query: 2 FTLVRVLTACSQLGDLRTGQWIHQYIEEKGMHKNVFVDTSLIDMYTKCGSMESARRVFDS 181
FT VL AC++L G +H + + G +VFV T+++ Y+KCG ++ A ++FD
Sbjct: 31 FTFSFVLKACARLNLFHLGMMMHSLVFKTGFDCDVFVKTNVVCFYSKCGFLKDAWKMFDD 90
Query: 182 MAEKDVVSWS 211
M K++VSW+
Sbjct: 91 MVVKNIVSWT 100
>ref|XP_002323645.1| predicted protein [Populus trichocarpa] gi|222868275|gb|EEF05406.1|
predicted protein [Populus trichocarpa]
Length = 682
Score = 99.4 bits (246), Expect = 3e-19
Identities = 44/71 (61%), Positives = 57/71 (80%)
Frame = +2
Query: 2 FTLVRVLTACSQLGDLRTGQWIHQYIEEKGMHKNVFVDTSLIDMYTKCGSMESARRVFDS 181
F+LV VL+AC + GDLR+G+WI +YI E GM +NVFV T+L+D Y KCG+ME AR VFD
Sbjct: 210 FSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDG 269
Query: 182 MAEKDVVSWSA 214
M EK++VSWS+
Sbjct: 270 MLEKNIVSWSS 280
Score = 61.2 bits (147), Expect = 8e-08
Identities = 30/71 (42%), Positives = 40/71 (56%)
Frame = +2
Query: 2 FTLVRVLTACSQLGDLRTGQWIHQYIEEKGMHKNVFVDTSLIDMYTKCGSMESARRVFDS 181
+ +V VL +C++LG L G W I N + T+LIDMY KCG M+ A VF
Sbjct: 311 YAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRG 370
Query: 182 MAEKDVVSWSA 214
M +KD V W+A
Sbjct: 371 MRKKDRVVWNA 381
Score = 60.8 bits (146), Expect = 1e-07
Identities = 28/71 (39%), Positives = 45/71 (63%)
Frame = +2
Query: 2 FTLVRVLTACSQLGDLRTGQWIHQYIEEKGMHKNVFVDTSLIDMYTKCGSMESARRVFDS 181
FT VL AC+++ D G +H + + G + FV SLI++YTKCG +++A +VFD
Sbjct: 109 FTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDD 168
Query: 182 MAEKDVVSWSA 214
+ +K+ SW+A
Sbjct: 169 IPDKNFASWTA 179