BLASTX nr result

ID: Dioscorea21_contig00030836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030836
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG94704.1| unnamed protein product [Oryza sativa Japonica G...   140   1e-31
ref|NP_001059837.1| Os07g0528100 [Oryza sativa Japonica Group] g...   140   1e-31
gb|AAU90089.1| putative polyprotein [Oryza sativa Japonica Group]     139   2e-31
gb|ABA96626.1| retrotransposon protein, putative, unclassified [...   133   1e-29
gb|ABA95283.1| retrotransposon protein, putative, unclassified, ...   133   1e-29

>dbj|BAG94704.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1094

 Score =  140 bits (352), Expect = 1e-31
 Identities = 65/110 (59%), Positives = 89/110 (80%)
 Frame = -1

Query: 332 NDEEIVCMIATEEPINFKEAVSEGAWLRAMQEEYQQIISNDTWELVNPPQNCRPIGLRWI 153
           NDE   C+IA +EP +FKEA  E  W++AM+EE   I  N+TW L + P + R IGL+W+
Sbjct: 577 NDE---CLIAEQEPFSFKEAEKEQCWMKAMEEEMSSIEGNNTWFLCDLPSDHRAIGLKWV 633

Query: 152 YKLKRNAQGEIVKYKARIVAKGYVQRAGIDFQEVYAPVARMESVKLILAL 3
           YK+KR+A+GEI+KYKAR+VAKGYVQ+ GID++EV+APVARME+V+L++AL
Sbjct: 634 YKIKRSAEGEILKYKARLVAKGYVQQQGIDYEEVFAPVARMETVRLLVAL 683


>ref|NP_001059837.1| Os07g0528100 [Oryza sativa Japonica Group]
           gi|113611373|dbj|BAF21751.1| Os07g0528100, partial
           [Oryza sativa Japonica Group]
          Length = 1187

 Score =  140 bits (352), Expect = 1e-31
 Identities = 65/110 (59%), Positives = 89/110 (80%)
 Frame = -1

Query: 332 NDEEIVCMIATEEPINFKEAVSEGAWLRAMQEEYQQIISNDTWELVNPPQNCRPIGLRWI 153
           NDE   C+IA +EP +FKEA  E  W++AM+EE   I  N+TW L + P + R IGL+W+
Sbjct: 670 NDE---CLIAEQEPFSFKEAEKEQCWMKAMEEEMSSIEGNNTWFLCDLPSDHRAIGLKWV 726

Query: 152 YKLKRNAQGEIVKYKARIVAKGYVQRAGIDFQEVYAPVARMESVKLILAL 3
           YK+KR+A+GEI+KYKAR+VAKGYVQ+ GID++EV+APVARME+V+L++AL
Sbjct: 727 YKIKRSAEGEILKYKARLVAKGYVQQQGIDYEEVFAPVARMETVRLLVAL 776


>gb|AAU90089.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1094

 Score =  139 bits (351), Expect = 2e-31
 Identities = 64/112 (57%), Positives = 89/112 (79%)
 Frame = -1

Query: 338 LSNDEEIVCMIATEEPINFKEAVSEGAWLRAMQEEYQQIISNDTWELVNPPQNCRPIGLR 159
           L  D +  C+IA +EP +FKEA  E  W++AM+EE   I  N+TW L + P + R IGL+
Sbjct: 572 LDFDYDDECLIAEQEPFSFKEAEKEQCWMKAMEEEMSSIEGNNTWFLCDLPSDHRAIGLK 631

Query: 158 WIYKLKRNAQGEIVKYKARIVAKGYVQRAGIDFQEVYAPVARMESVKLILAL 3
           W+YK+KR+A+GEI+KYKAR+VAKGYVQ+ GID++EV+APVARME+V+L++AL
Sbjct: 632 WVYKIKRSAEGEILKYKARLVAKGYVQQQGIDYEEVFAPVARMETVRLLVAL 683


>gb|ABA96626.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1629

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/108 (58%), Positives = 83/108 (76%)
 Frame = -1

Query: 326  EEIVCMIATEEPINFKEAVSEGAWLRAMQEEYQQIISNDTWELVNPPQNCRPIGLRWIYK 147
            +E + M++ EEP  F +A  +  W RAM +E   I  N TW LV+ P   RPIGL+W+YK
Sbjct: 898  QEELMMVSGEEPATFAQAERDEDWRRAMLDEISSIEENKTWRLVDLPSGHRPIGLKWVYK 957

Query: 146  LKRNAQGEIVKYKARIVAKGYVQRAGIDFQEVYAPVARMESVKLILAL 3
            LK++AQG +VK+KAR+VAKGYVQRAGIDF EV+APVAR++SV+L+LAL
Sbjct: 958  LKKDAQGVVVKHKARLVAKGYVQRAGIDFDEVFAPVARLDSVRLLLAL 1005


>gb|ABA95283.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group] gi|215767919|dbj|BAH00148.1|
            unnamed protein product [Oryza sativa Japonica Group]
          Length = 1369

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/108 (58%), Positives = 83/108 (76%)
 Frame = -1

Query: 326  EEIVCMIATEEPINFKEAVSEGAWLRAMQEEYQQIISNDTWELVNPPQNCRPIGLRWIYK 147
            +E + M++ EEP  F +A  +  W RAM +E   I  N TW LV+ P   RPIGL+W+YK
Sbjct: 852  QEELMMVSGEEPATFAQAERDEDWRRAMLDEISSIEENKTWRLVDLPSGHRPIGLKWVYK 911

Query: 146  LKRNAQGEIVKYKARIVAKGYVQRAGIDFQEVYAPVARMESVKLILAL 3
            LK++AQG +VK+KAR+VAKGYVQRAGIDF EV+APVAR++SV+L+LAL
Sbjct: 912  LKKDAQGVVVKHKARLVAKGYVQRAGIDFDEVFAPVARLDSVRLLLAL 959


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