BLASTX nr result

ID: Dioscorea21_contig00030820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030820
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK01984.1| predicted protein [Hordeum vulgare subsp. vulgare]     75   6e-12
ref|XP_003564344.1| PREDICTED: LOW QUALITY PROTEIN: conserved ol...    71   1e-10
ref|NP_001146211.1| uncharacterized protein LOC100279781 [Zea ma...    67   2e-09
ref|XP_002456434.1| hypothetical protein SORBIDRAFT_03g036240 [S...    67   2e-09
ref|XP_002311274.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09

>dbj|BAK01984.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1065

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 40/75 (53%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
 Frame = +3

Query: 3    KKVVAIYADFTKTIEAHDSRVSEKGVLQILLDLQFCADVLSGGRDPTANNSESD--TNTP 176
            +KV++IY +F  +IE+ +S+VSEKGVLQILLDL+F  D+LSGG++  AN SE+    +T 
Sbjct: 799  QKVISIYVNFLASIESSNSQVSEKGVLQILLDLRFIGDILSGGKNSLANPSETQIKQDTA 858

Query: 177  LPPFRRMVSQFQSGS 221
               FRR  SQFQ+ S
Sbjct: 859  KTTFRRKQSQFQADS 873


>ref|XP_003564344.1| PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex
            subunit 1-like [Brachypodium distachyon]
          Length = 1073

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/80 (50%), Positives = 53/80 (66%), Gaps = 7/80 (8%)
 Frame = +3

Query: 3    KKVVAIYADFTKTIEAHDSRVSEKGVLQILLDLQFCADVLSGGRDPTANNSESDTNTPLP 182
            +KV+ IY +F  +IE  +S+VSEKGVLQILLDL+F  DVLSGG++ ++N SE+       
Sbjct: 802  QKVIKIYKNFLVSIELGNSQVSEKGVLQILLDLRFIGDVLSGGKNSSSNPSETQIKQDSS 861

Query: 183  P-------FRRMVSQFQSGS 221
            P       FRR  SQFQ+ S
Sbjct: 862  PSTMAKTSFRRKQSQFQADS 881


>ref|NP_001146211.1| uncharacterized protein LOC100279781 [Zea mays]
            gi|219886199|gb|ACL53474.1| unknown [Zea mays]
            gi|414880251|tpg|DAA57382.1| TPA: hypothetical protein
            ZEAMMB73_961586 [Zea mays]
          Length = 1074

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
 Frame = +3

Query: 3    KKVVAIYADFTKTIEAHDSRVSEKGVLQILLDLQFCADVLSGGRDPTANNSESDTNTPLP 182
            +KVV IY  F   +E+ +S VSEKG+LQILLDL+F  DVLSGG+  + N+ E  T     
Sbjct: 803  QKVVNIYEKFLSCVESGNSTVSEKGILQILLDLRFVGDVLSGGKSSSTNSPEMQTKQDFL 862

Query: 183  P-------FRRMVSQFQSGS 221
            P       FRR  SQ Q+ S
Sbjct: 863  PSAVTKTSFRRKQSQLQADS 882


>ref|XP_002456434.1| hypothetical protein SORBIDRAFT_03g036240 [Sorghum bicolor]
            gi|241928409|gb|EES01554.1| hypothetical protein
            SORBIDRAFT_03g036240 [Sorghum bicolor]
          Length = 1074

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 7/80 (8%)
 Frame = +3

Query: 3    KKVVAIYADFTKTIEAHDSRVSEKGVLQILLDLQFCADVLSGGRDPTANNSESDTNTPLP 182
            +KV+ IY  F  ++E+ +S VSEKG+LQILLDL F  DVLSGG+  +AN +E  T     
Sbjct: 803  QKVINIYEKFLSSVESGNSPVSEKGILQILLDLCFIGDVLSGGKSSSANTTEMQTKQDSL 862

Query: 183  P-------FRRMVSQFQSGS 221
            P       FRR  SQ Q+ S
Sbjct: 863  PSTVTKTSFRRKQSQLQADS 882


>ref|XP_002311274.1| predicted protein [Populus trichocarpa] gi|222851094|gb|EEE88641.1|
            predicted protein [Populus trichocarpa]
          Length = 1071

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/68 (55%), Positives = 44/68 (64%)
 Frame = +3

Query: 3    KKVVAIYADFTKTIEAHDSRVSEKGVLQILLDLQFCADVLSGGRDPTANNSESDTNTPLP 182
            +KV+ IY DF  + E+H S+VSEKGVLQILLDL+F ADVLSGG D   N   S       
Sbjct: 800  EKVIEIYEDFLSSSESHQSQVSEKGVLQILLDLRFAADVLSGG-DCNINEEISRNPRVKI 858

Query: 183  PFRRMVSQ 206
            PFRR   Q
Sbjct: 859  PFRRKQEQ 866


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