BLASTX nr result

ID: Dioscorea21_contig00030792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030792
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32639.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002273763.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
ref|XP_002443990.1| hypothetical protein SORBIDRAFT_07g005450 [S...    97   1e-18
ref|XP_003539183.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
gb|EAY91060.1| hypothetical protein OsI_12669 [Oryza sativa Indi...    96   4e-18

>emb|CBI32639.3| unnamed protein product [Vitis vinifera]
          Length = 459

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/92 (51%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
 Frame = -1

Query: 275 KYGIDPGAEHYACLIDMLGKGGRIEEAWEVYGGVVK-EGKLSSGVCVAMLNGCKVCMDLG 99
           KY +DPG EHYAC ID+LG+ G+IEE W ++  ++K + K ++ V  A+LN C   +D+ 
Sbjct: 330 KYSLDPGPEHYACFIDILGRAGQIEEVWRLFNNMIKNQTKPTAAVWAAILNACSHNLDVS 389

Query: 98  RGEIVAKHMMELGEEDKAGVYVLLSNFYAGIG 3
           RGE  AK+++EL E +K G YVLLSNFYA +G
Sbjct: 390 RGEFAAKNLLEL-EPNKPGNYVLLSNFYAAVG 420


>ref|XP_002273763.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 498

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/92 (51%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
 Frame = -1

Query: 275 KYGIDPGAEHYACLIDMLGKGGRIEEAWEVYGGVVK-EGKLSSGVCVAMLNGCKVCMDLG 99
           KY +DPG EHYAC ID+LG+ G+IEE W ++  ++K + K ++ V  A+LN C   +D+ 
Sbjct: 369 KYSLDPGPEHYACFIDILGRAGQIEEVWRLFNNMIKNQTKPTAAVWAAILNACSHNLDVS 428

Query: 98  RGEIVAKHMMELGEEDKAGVYVLLSNFYAGIG 3
           RGE  AK+++EL E +K G YVLLSNFYA +G
Sbjct: 429 RGEFAAKNLLEL-EPNKPGNYVLLSNFYAAVG 459


>ref|XP_002443990.1| hypothetical protein SORBIDRAFT_07g005450 [Sorghum bicolor]
           gi|241940340|gb|EES13485.1| hypothetical protein
           SORBIDRAFT_07g005450 [Sorghum bicolor]
          Length = 464

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 48/92 (52%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
 Frame = -1

Query: 278 NKYGIDPGAEHYACLIDMLGKGGRIEEAWEVYGGV-VKEGKLSSGVCVAMLNGCKVCMDL 102
           +KYGIDP  EHYACLIDMLG+ GRI+EAW++Y  +     K SS +CVAMLN C+  MD 
Sbjct: 344 SKYGIDPQPEHYACLIDMLGRTGRIDEAWDLYCSLTASRNKSSSAICVAMLNACRANMDA 403

Query: 101 GRGEIVAKHMMELGEEDKAGVYVLLSNFYAGI 6
            RG+ VA  M+E+   +   ++VL+SNF+A +
Sbjct: 404 VRGKKVAVRMLEVDPRNPR-IHVLISNFHAAM 434


>ref|XP_003539183.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
           mitochondrial-like [Glycine max]
          Length = 547

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
 Frame = -1

Query: 275 KYGIDPGAEHYACLIDMLGKGGRIEEAWEVYGGVVKEG-KLSSGVCVAMLNGCKVCMDLG 99
           KYG+ P  EHYAC ID+LG+ G IEE W  Y  +V +G + ++GV VA+LN C +  D+ 
Sbjct: 417 KYGLQPDPEHYACYIDILGRAGNIEEVWSAYHNMVVQGTRPTAGVWVALLNACSLNQDVE 476

Query: 98  RGEIVAKHMMELGEEDKAGVYVLLSNFYAGI 6
           RGE+ AKH+++L E +KA   VL+SNFYA I
Sbjct: 477 RGELAAKHLLQL-EPNKASNIVLVSNFYAAI 506


>gb|EAY91060.1| hypothetical protein OsI_12669 [Oryza sativa Indica Group]
          Length = 449

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/89 (50%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
 Frame = -1

Query: 275 KYGIDPGAEHYACLIDMLGKGGRIEEAWEVYGGV-VKEGKLSSGVCVAMLNGCKVCMDLG 99
           +YGI+PG EHYAC ID+LG+ G+I+EAW++Y        +LS  +CVAMLN C+  MD+ 
Sbjct: 329 QYGINPGPEHYACFIDLLGRAGQIDEAWDLYCSFSTTRSELSGSICVAMLNACRANMDVV 388

Query: 98  RGEIVAKHMMELGEEDKAGVYVLLSNFYA 12
           RG  VA H++E+  E+  G +VL+SNF+A
Sbjct: 389 RGNKVALHLLEVDPEN-PGSHVLISNFHA 416


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