BLASTX nr result

ID: Dioscorea21_contig00030788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030788
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318186.1| predicted protein [Populus trichocarpa] gi|2...   209   2e-52
ref|XP_003581157.1| PREDICTED: pentatricopeptide repeat-containi...   199   2e-49
gb|EAY93965.1| hypothetical protein OsI_15743 [Oryza sativa Indi...   193   1e-47
emb|CAH66401.1| OSIGBa0155K12.4 [Oryza sativa Indica Group]           193   1e-47
emb|CAD40778.1| OSJNBb0012E08.2 [Oryza sativa Japonica Group]         193   1e-47

>ref|XP_002318186.1| predicted protein [Populus trichocarpa] gi|222858859|gb|EEE96406.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  209 bits (532), Expect = 2e-52
 Identities = 95/136 (69%), Positives = 117/136 (86%)
 Frame = +1

Query: 1   RGERIHEYIKRKRSKLSVYLITGLVDMYAKCGCIRIAREMFDESSQRNLFTWNAMIIGLA 180
           +G++IH+YI+R   K+  +L TGLVD YAKCGC+ IA ++FD SS +NLFTWNAM++GLA
Sbjct: 274 KGKKIHDYIERNAMKVDTFLSTGLVDFYAKCGCVDIALKIFDSSSDKNLFTWNAMLVGLA 333

Query: 181 MHGHGELSMEYFNKMIMSGVKPDGVSILGVLVGCSHAGLVSTACKVFDEMECVYGVKREV 360
           MHG+GEL +EYF++MI +GVKPDG+SILGVLVGCSH+GLV  A K+FDEME VYGV RE 
Sbjct: 334 MHGYGELLLEYFSRMIEAGVKPDGISILGVLVGCSHSGLVDEARKLFDEMESVYGVPREP 393

Query: 361 KHYGCMADLLGRAGMI 408
           KHYGCMADLLGRAG+I
Sbjct: 394 KHYGCMADLLGRAGLI 409



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/88 (31%), Positives = 49/88 (55%)
 Frame = +1

Query: 70  LVDMYAKCGCIRIAREMFDESSQRNLFTWNAMIIGLAMHGHGELSMEYFNKMIMSGVKPD 249
           L+D + K G +  ARE+FD    R+  +WN +I G A   + E ++E F+ M+   ++PD
Sbjct: 196 LIDGFVKAGDVVKARELFDLMPVRDSVSWNTIIAGCAKGDYCEEAIELFDFMMDLEIRPD 255

Query: 250 GVSILGVLVGCSHAGLVSTACKVFDEME 333
            V+++  L  C+  G +    K+ D +E
Sbjct: 256 NVALVSTLSACAQLGELEKGKKIHDYIE 283


>ref|XP_003581157.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61800-like, partial [Brachypodium distachyon]
          Length = 357

 Score =  199 bits (506), Expect = 2e-49
 Identities = 84/136 (61%), Positives = 114/136 (83%)
 Frame = +1

Query: 1   RGERIHEYIKRKRSKLSVYLITGLVDMYAKCGCIRIAREMFDESSQRNLFTWNAMIIGLA 180
           +G  +HEY+++ R + +V+L TGLVD+YAKCGC+ IARE+FD   +RN+FTWNA+I+GLA
Sbjct: 128 KGREVHEYVRQSRPRPNVFLCTGLVDLYAKCGCVEIAREVFDTCPERNVFTWNALIVGLA 187

Query: 181 MHGHGELSMEYFNKMIMSGVKPDGVSILGVLVGCSHAGLVSTACKVFDEMECVYGVKREV 360
           MHGHG ++++YF++M+  G +PDGV+ LGVL+GCSHAGL+  A ++F EME  YGV RE+
Sbjct: 188 MHGHGTVTLKYFDRMLAEGFRPDGVTFLGVLIGCSHAGLIDMAKRIFFEMEMKYGVSREL 247

Query: 361 KHYGCMADLLGRAGMI 408
           KHYGCMADLLGRAG+I
Sbjct: 248 KHYGCMADLLGRAGLI 263


>gb|EAY93965.1| hypothetical protein OsI_15743 [Oryza sativa Indica Group]
           gi|125590256|gb|EAZ30606.1| hypothetical protein
           OsJ_14659 [Oryza sativa Japonica Group]
          Length = 328

 Score =  193 bits (491), Expect = 1e-47
 Identities = 81/136 (59%), Positives = 115/136 (84%)
 Frame = +1

Query: 1   RGERIHEYIKRKRSKLSVYLITGLVDMYAKCGCIRIAREMFDESSQRNLFTWNAMIIGLA 180
           +G+ +HEY++R R + +VYL TG+VD+YAKCG + +ARE+FD   ++N+FTWNA+I+GLA
Sbjct: 90  KGQEVHEYVRRTRPRPNVYLCTGIVDLYAKCGRVEVAREVFDACPEKNVFTWNALIVGLA 149

Query: 181 MHGHGELSMEYFNKMIMSGVKPDGVSILGVLVGCSHAGLVSTACKVFDEMECVYGVKREV 360
           MHGHG ++++YF++M++ G +PDG + LGVL+GCSHAGLV TA ++F EM+  +GV RE+
Sbjct: 150 MHGHGTVALDYFDRMLVEGFRPDGTTFLGVLIGCSHAGLVDTARRIFYEMQHNHGVPREL 209

Query: 361 KHYGCMADLLGRAGMI 408
           KHYGCMADLLGRAG+I
Sbjct: 210 KHYGCMADLLGRAGLI 225


>emb|CAH66401.1| OSIGBa0155K12.4 [Oryza sativa Indica Group]
          Length = 486

 Score =  193 bits (491), Expect = 1e-47
 Identities = 81/136 (59%), Positives = 115/136 (84%)
 Frame = +1

Query: 1   RGERIHEYIKRKRSKLSVYLITGLVDMYAKCGCIRIAREMFDESSQRNLFTWNAMIIGLA 180
           +G+ +HEY++R R + +VYL TG+VD+YAKCG + +ARE+FD   ++N+FTWNA+I+GLA
Sbjct: 248 KGQEVHEYVRRTRPRPNVYLCTGIVDLYAKCGRVEVAREVFDACPEKNVFTWNALIVGLA 307

Query: 181 MHGHGELSMEYFNKMIMSGVKPDGVSILGVLVGCSHAGLVSTACKVFDEMECVYGVKREV 360
           MHGHG ++++YF++M++ G +PDG + LGVL+GCSHAGLV TA ++F EM+  +GV RE+
Sbjct: 308 MHGHGTVALDYFDRMLVEGFRPDGTTFLGVLIGCSHAGLVDTARRIFYEMQHNHGVPREL 367

Query: 361 KHYGCMADLLGRAGMI 408
           KHYGCMADLLGRAG+I
Sbjct: 368 KHYGCMADLLGRAGLI 383


>emb|CAD40778.1| OSJNBb0012E08.2 [Oryza sativa Japonica Group]
          Length = 486

 Score =  193 bits (491), Expect = 1e-47
 Identities = 81/136 (59%), Positives = 115/136 (84%)
 Frame = +1

Query: 1   RGERIHEYIKRKRSKLSVYLITGLVDMYAKCGCIRIAREMFDESSQRNLFTWNAMIIGLA 180
           +G+ +HEY++R R + +VYL TG+VD+YAKCG + +ARE+FD   ++N+FTWNA+I+GLA
Sbjct: 248 KGQEVHEYVRRTRPRPNVYLCTGIVDLYAKCGRVEVAREVFDACPEKNVFTWNALIVGLA 307

Query: 181 MHGHGELSMEYFNKMIMSGVKPDGVSILGVLVGCSHAGLVSTACKVFDEMECVYGVKREV 360
           MHGHG ++++YF++M++ G +PDG + LGVL+GCSHAGLV TA ++F EM+  +GV RE+
Sbjct: 308 MHGHGTVALDYFDRMLVEGFRPDGTTFLGVLIGCSHAGLVDTARRIFYEMQHNHGVPREL 367

Query: 361 KHYGCMADLLGRAGMI 408
           KHYGCMADLLGRAG+I
Sbjct: 368 KHYGCMADLLGRAGLI 383


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