BLASTX nr result

ID: Dioscorea21_contig00030772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030772
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308297.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
emb|CBI27927.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002279729.1| PREDICTED: uncharacterized protein LOC100262...    66   3e-09
ref|XP_002514143.1| conserved hypothetical protein [Ricinus comm...    65   5e-09
ref|NP_194685.1| uncharacterized protein [Arabidopsis thaliana] ...    64   2e-08

>ref|XP_002308297.1| predicted protein [Populus trichocarpa] gi|222854273|gb|EEE91820.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 49/143 (34%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
 Frame = -2

Query: 544 NSPSPENEASLWFQQG-------LQXXXXXXXXXXXXXXXXXXXXXSIFFLTLPSFVQAR 386
           NSP+PE EASLW +Q        +                       +F  TLP  VQ+R
Sbjct: 13  NSPTPETEASLWLEQSSSSSSVPITTTSFLSLLAEPIINNSSTNRRVMFLQTLPFLVQSR 72

Query: 385 ILSFFAYDHRRFSPSLLRIIAGNVVR-SSGSDFWVLRAARNLLDVLPLDDCESLE-RSRE 212
           ILSF  ++H+RF    L  +A  ++  + G DFWV RAARNLLD +   + + +   S +
Sbjct: 73  ILSFLGFEHQRFCKRDLSKLARTLLTDTEGIDFWVKRAARNLLDKVSDSNYQWISGLSLD 132

Query: 211 VEAEECGDVFYSLPHWLCDHAAS 143
              E   + F S+P +L D A+S
Sbjct: 133 SGEERVDEEFGSIPDYLKDAASS 155


>emb|CBI27927.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 50/166 (30%), Positives = 71/166 (42%), Gaps = 15/166 (9%)
 Frame = -2

Query: 544 NSPSPENEASLWFQQGLQXXXXXXXXXXXXXXXXXXXXXSI-------------FFLTLP 404
           NSPSPE EASLW QQ                        ++             +  TLP
Sbjct: 13  NSPSPEFEASLWLQQSFNASSATTITTGSFLSLLTKPCDAVVSDSSSPSTKRVMWVQTLP 72

Query: 403 SFVQARILSFFAYDHRRFSPSLLRIIAGNVVRSSGS-DFWVLRAARNLLDVLPLDDCESL 227
           + VQ+RILSF A + +RF    L  +A NV+   G  +FWV R ARNLLD +     E +
Sbjct: 73  NVVQSRILSFLALEKQRFCSRDLSRLARNVLSGDGEVEFWVKRGARNLLDQVSESSYEWI 132

Query: 226 ER-SREVEAEECGDVFYSLPHWLCDHAASTTXXXXXXXLSREQFHS 92
                +   E   + F ++P WL D    +        +S ++ +S
Sbjct: 133 SSLGLDSGGERVNEEFEAMPDWLKDTVGDSDLLLPWLPISPDELNS 178


>ref|XP_002279729.1| PREDICTED: uncharacterized protein LOC100262802 [Vitis vinifera]
          Length = 491

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 50/166 (30%), Positives = 71/166 (42%), Gaps = 15/166 (9%)
 Frame = -2

Query: 544 NSPSPENEASLWFQQGLQXXXXXXXXXXXXXXXXXXXXXSI-------------FFLTLP 404
           NSPSPE EASLW QQ                        ++             +  TLP
Sbjct: 13  NSPSPEFEASLWLQQSFNASSATTITTGSFLSLLTKPCDAVVSDSSSPSTKRVMWVQTLP 72

Query: 403 SFVQARILSFFAYDHRRFSPSLLRIIAGNVVRSSGS-DFWVLRAARNLLDVLPLDDCESL 227
           + VQ+RILSF A + +RF    L  +A NV+   G  +FWV R ARNLLD +     E +
Sbjct: 73  NVVQSRILSFLALEKQRFCSRDLSRLARNVLSGDGEVEFWVKRGARNLLDQVSESSYEWI 132

Query: 226 ER-SREVEAEECGDVFYSLPHWLCDHAASTTXXXXXXXLSREQFHS 92
                +   E   + F ++P WL D    +        +S ++ +S
Sbjct: 133 SSLGLDSGGERVNEEFEAMPDWLKDTVGDSDLLLPWLPISPDELNS 178


>ref|XP_002514143.1| conserved hypothetical protein [Ricinus communis]
           gi|223546599|gb|EEF48097.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 493

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 48/147 (32%), Positives = 64/147 (43%), Gaps = 17/147 (11%)
 Frame = -2

Query: 544 NSPSPENEASLWFQQGLQXXXXXXXXXXXXXXXXXXXXXS--------------IFFLTL 407
           NS +PE EAS+W  Q                        +              +F  TL
Sbjct: 13  NSSTPETEASIWLNQSFSASSPSSPITTASFLSLLTKPINASITSSSPPATKRIMFIQTL 72

Query: 406 PSFVQARILSFFAYDHRRFSPSLLRIIAGNVVRSS-GSDFWVLRAARNLLDVLPLDDCES 230
           P  VQ+RILSF A++H RF    L  +A N++  + G DFWV RAA ++LD +   + E 
Sbjct: 73  PDMVQSRILSFLAFEHERFCKRKLSRLATNILTDNLGIDFWVKRAAHDVLDQISESNYEW 132

Query: 229 LERSREVEAEECGD--VFYSLPHWLCD 155
           +        EE  D   F SLP WL D
Sbjct: 133 ISGFSLDSGEERVDDGEFESLPDWLKD 159


>ref|NP_194685.1| uncharacterized protein [Arabidopsis thaliana]
           gi|5123550|emb|CAB45316.1| hypothetical protein
           [Arabidopsis thaliana] gi|7269855|emb|CAB79714.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|23297599|gb|AAN12988.1| unknown protein [Arabidopsis
           thaliana] gi|332660245|gb|AEE85645.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 493

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 49/152 (32%), Positives = 67/152 (44%), Gaps = 19/152 (12%)
 Frame = -2

Query: 541 SPSPENEASLWFQQGL--------------QXXXXXXXXXXXXXXXXXXXXXSIFFLTLP 404
           SPSPE EASLW  Q                +                      +F  TLP
Sbjct: 14  SPSPEAEASLWLDQASNLFSSSSSAAAPINRSSFVSLLKKQCDQNSSPVTKKVLFIETLP 73

Query: 403 SFVQARILSFFAYDHRRFSPSLLRIIAGNVVRSSGS---DFWVLRAARNLLDVLPLDDCE 233
           + VQ++ILSF  ++++RF  S L  +A  ++ S G+   DFWV R A NLLD +P    E
Sbjct: 74  NMVQSKILSFLLFEYQRFCVSDLVWLAREMLGSGGNKVVDFWVQRDAHNLLDRIPKPKFE 133

Query: 232 SLERSREVEAEE--CGDVFYSLPHWLCDHAAS 143
            +       A+E     VF S+P WL +   S
Sbjct: 134 WISNLDLDSADEDSMKQVFDSVPDWLSEKLGS 165


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