BLASTX nr result

ID: Dioscorea21_contig00030750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030750
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322072.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
ref|XP_002278023.1| PREDICTED: geranylgeranyl pyrophosphate synt...    75   5e-12
dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]      75   7e-12
emb|CAN63418.1| hypothetical protein VITISV_007690 [Vitis vinifera]    74   2e-11
gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I...    71   8e-11

>ref|XP_002322072.1| predicted protein [Populus trichocarpa] gi|222869068|gb|EEF06199.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/70 (52%), Positives = 46/70 (65%)
 Frame = +3

Query: 33  SMQKELKTHLHNSIPKTQPLEVTNPMHHLLSSAPTTMAPYVCLAASDLVGGRRDVALDVA 212
           S+  E+  HL  +IP   PL V  PMHHL  +AP T AP +C+AA +LVGG RD A+  A
Sbjct: 5   SVNDEIDAHLKQAIPIRPPLSVFEPMHHLTFAAPRTTAPALCIAACELVGGNRDQAMAAA 64

Query: 213 TALHLMHTAA 242
           +AL LMH AA
Sbjct: 65  SALRLMHAAA 74


>ref|XP_002278023.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
           chloroplastic [Vitis vinifera]
          Length = 298

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 34/71 (47%), Positives = 48/71 (67%)
 Frame = +3

Query: 33  SMQKELKTHLHNSIPKTQPLEVTNPMHHLLSSAPTTMAPYVCLAASDLVGGRRDVALDVA 212
           S+  ++  HL   I   +P  V  PMHHL  +AP T AP +C+AA +LVGGRR++A+  A
Sbjct: 43  SINDDIDAHLRRVIAIREPFSVFKPMHHLTFAAPETTAPALCIAACELVGGRRELAIAAA 102

Query: 213 TALHLMHTAAW 245
           +ALHLMH A++
Sbjct: 103 SALHLMHAASY 113


>dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 306

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/72 (50%), Positives = 49/72 (68%)
 Frame = +3

Query: 27  FKSMQKELKTHLHNSIPKTQPLEVTNPMHHLLSSAPTTMAPYVCLAASDLVGGRRDVALD 206
           + S+  +L THL  +IP  QPL V  PM HL+ SAP T AP +C+AA +LVGG R+ A+ 
Sbjct: 44  WSSVNADLDTHLKQAIPIRQPLAVFEPMRHLILSAPQTSAPALCIAACELVGGHRNQAMA 103

Query: 207 VATALHLMHTAA 242
            A+AL L+H +A
Sbjct: 104 AASALRLVHASA 115


>emb|CAN63418.1| hypothetical protein VITISV_007690 [Vitis vinifera]
          Length = 298

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/73 (45%), Positives = 48/73 (65%)
 Frame = +3

Query: 27  FKSMQKELKTHLHNSIPKTQPLEVTNPMHHLLSSAPTTMAPYVCLAASDLVGGRRDVALD 206
           + S+  ++  HL   I   +P  V  PMHHL  +AP T AP +C+AA +L GGRR++A+ 
Sbjct: 41  WNSINDDIDAHLRRVITIREPFSVFKPMHHLTFAAPETTAPALCIAACELFGGRRELAIA 100

Query: 207 VATALHLMHTAAW 245
            A+ALHLMH A++
Sbjct: 101 AASALHLMHAASY 113


>gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I [Salvia
           miltiorrhiza]
          Length = 314

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/78 (42%), Positives = 50/78 (64%)
 Frame = +3

Query: 15  HHHLFKSMQKELKTHLHNSIPKTQPLEVTNPMHHLLSSAPTTMAPYVCLAASDLVGGRRD 194
           +H  + +++ ++ T+L  SI    P  V  PMHHL  +AP T A  +C+AA +LVGG R 
Sbjct: 47  NHSYWAAIEADIDTYLKKSIAIRSPETVFEPMHHLTFAAPRTAASAICVAACELVGGERS 106

Query: 195 VALDVATALHLMHTAAWA 248
            A+  A+A+H+MH AA+A
Sbjct: 107 QAIATASAIHIMHAAAYA 124


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