BLASTX nr result

ID: Dioscorea21_contig00030725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030725
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628018.1| hypothetical protein MTR_8g041480 [Medicago ...    94   3e-17
emb|CAN72727.1| hypothetical protein VITISV_015094 [Vitis vinifera]    94   4e-17
gb|EEE50714.1| hypothetical protein OsJ_30995 [Oryza sativa Japo...    92   1e-16
dbj|BAJ96734.1| predicted protein [Hordeum vulgare subsp. vulgare]     91   2e-16
ref|XP_002438675.1| hypothetical protein SORBIDRAFT_10g024140 [S...    91   2e-16

>ref|XP_003628018.1| hypothetical protein MTR_8g041480 [Medicago truncatula]
           gi|355522040|gb|AET02494.1| hypothetical protein
           MTR_8g041480 [Medicago truncatula]
          Length = 491

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 12/183 (6%)
 Frame = +3

Query: 111 WALTGNGRFSVKSFYN-----FLNDGGLCCEGAKFF---WNNTCPKKITLLNWLVWKDKI 266
           W    +G+F+VKS Y      +L+DG L  E A  F   W    P K+   +W +  D+I
Sbjct: 45  WKPDADGKFTVKSCYLLLQNLWLDDGVLSLEEALVFRELWKTRAPTKVLAFSWTLLLDRI 104

Query: 267 LTLENLEKRKC-NRLPTETCVLCHSGIESSDHLFIHCTVASQVWSHFSDLLG--LPEPP- 434
            T  NL+KR+      +  CV C +  ES+ HLF+HC +  +VW      L   L  PP 
Sbjct: 105 PTKVNLDKRRLLGNEDSRRCVFCDTHHESTLHLFLHCEIIDKVWREVMRWLNFNLTTPPN 164

Query: 435 LTVQGLWGNWRLLSRPSRRSTFDLIVKAIVWNIWIARNDCIFNAIVLPVLSIIQKVVHMI 614
           L +        + S+  RR  + LI  A++W +W+ARND IFN  ++ V  ++ K+  ++
Sbjct: 165 LFIHICCWTREVWSKKLRRGAW-LIWHAVIWVVWLARNDRIFNNKIIEVEEMVDKIKVLV 223

Query: 615 ISW 623
             W
Sbjct: 224 WQW 226


>emb|CAN72727.1| hypothetical protein VITISV_015094 [Vitis vinifera]
          Length = 1677

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
 Frame = +3

Query: 69   STLSIPGDLRDSKSWALTGNGRFSVKSFYNFLN--DGGLCCEGAKFFWNNTCPKKITLLN 242
            S L  P  L DS++W+L+ +G FSVKSF+  L+     L    AKF W++  P K+  L 
Sbjct: 1461 SVLFSPSSL-DSRAWSLSSSGLFSVKSFFLALSKVSNPLMFLPAKFLWSSKVPSKVKALA 1519

Query: 243  WLVWKDKILTLENLE-KRKCNRLPTETCVLCHSGIESSDHLFIHCTVASQVWSHFSDLLG 419
            WLV   K+ T + L+  R    L  + C+LC    ESSDH+F+HC V   +W    +L+G
Sbjct: 1520 WLVAHGKVNTNDKLQLXRPYKALCPQWCILCKRNGESSDHIFLHCPVTIGLWHRLFNLVG 1579

Query: 420  LPEPP---------LTVQGLWGNWRLLSRPSRRSTFDLIVKAIVWNIWIARNDCIF 560
            L   P         +T +GL  + R       ++ + +    ++W +W  RN+ IF
Sbjct: 1580 LVWVPPRSLEDMLVITFKGLGNSLR------GKTLWQIACLTLIWMVWQERNNWIF 1629


>gb|EEE50714.1| hypothetical protein OsJ_30995 [Oryza sativa Japonica Group]
          Length = 432

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 59/193 (30%), Positives = 82/193 (42%), Gaps = 7/193 (3%)
 Frame = +3

Query: 66  LSTLSIPGDLRDSKSWALTGNGRFSVKSFYNFLNDGGLCCEGAKFFWNNTCPKKITLLNW 245
           L ++++   +RDS  W    NG FSV S Y+        C   +  W    P ++    W
Sbjct: 233 LQSVAVQEGVRDSVVWRFAANGVFSVSSAYDLFFLTSTKCPFGEAIWKTKAPARVRFFLW 292

Query: 246 LVWKDKILTLENLEKRKCNRLPTETCVLCHSGIESSDHLFIHCTVASQVWSHFS------ 407
           L  K + LT +NL KR     P   C+LC S  E+  HL   CT  ++VWS         
Sbjct: 293 LAAKGRCLTADNLSKRGWPHNP--DCLLCLSAPENCKHLCTSCTYTNRVWSLLRTWLGFG 350

Query: 408 -DLLGLPEPPLTVQGLWGNWRLLSRPSRRSTFDLIVKAIVWNIWIARNDCIFNAIVLPVL 584
            DL G     L V   W   R   RPS R  FD     + W IW  RN  +F+     V 
Sbjct: 351 FDLPGRSGEELAV--WWQRARSCCRPSYRDAFDSFFMLVCWRIWKERNAQVFDQKEKTVE 408

Query: 585 SIIQKVVHMIISW 623
           S++  +   ++ W
Sbjct: 409 SLVADIKEDVMVW 421


>dbj|BAJ96734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 418

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 51/191 (26%), Positives = 77/191 (40%), Gaps = 4/191 (2%)
 Frame = +3

Query: 99  DSKSWALTGNGRFSVKSFYNFLNDGGLCCEGAKFFWNNTCPKKITLLNWLVWKDKILTLE 278
           D  +W  T NG ++ +S Y     G + C   K  W    P K+   +WL  +D+  T E
Sbjct: 223 DKLTWKWTANGNYTARSCYQATFYGSIACRSWKLIWKGWAPSKVRFFHWLANQDRCWTAE 282

Query: 279 NLEKRKCNRLPTETCVLCHSGIESSDHLFIHCTVASQVWSHFSDLLGLPEP----PLTVQ 446
            L        P   C+LC    E+  HL + C  A Q W      L LP P      T+Q
Sbjct: 283 RLACHGLTHHP--RCLLCDQEPETMQHLLLTCPFAKQTWHGIMSWLRLPAPVPDQDATLQ 340

Query: 447 GLWGNWRLLSRPSRRSTFDLIVKAIVWNIWIARNDCIFNAIVLPVLSIIQKVVHMIISWY 626
             W   R  + P  R     +   + W IW  RN C+F+ +   ++ +   +     SW 
Sbjct: 341 DWWLRARDATPPLLRKALASVALLVPWMIWKHRNACVFDHVTPSLVELAAAIQDESRSWA 400

Query: 627 TVASESAKVRL 659
              ++  +V L
Sbjct: 401 KAGAKGLRVTL 411


>ref|XP_002438675.1| hypothetical protein SORBIDRAFT_10g024140 [Sorghum bicolor]
            gi|241916898|gb|EER90042.1| hypothetical protein
            SORBIDRAFT_10g024140 [Sorghum bicolor]
          Length = 1525

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 1/195 (0%)
 Frame = +3

Query: 99   DSKSWALTGNGRFSVKSFYNFLNDGGLCCEGAKFFWNNTCPKKITLLNWLVWKDKILTLE 278
            D   WAL  +G++S  S Y  L  GG+    A   WN+  P K+ +  W+   D+I    
Sbjct: 1326 DVVRWALEKSGKYSTSSLYKALTFGGVKDTRAMLIWNSPIPLKVKIFFWMALHDRIQCGV 1385

Query: 279  NLEKRKCNRLPTETCVLCHSGIESSDHLFIHCTVASQVWSHFSDLLGLPEPPLTVQGLWG 458
             L+K+K +    E C +C   +E+SDH+   C +A  +W+   + LG    P +   L+ 
Sbjct: 1386 QLKKKKWS--GPENCFVCDK-LETSDHILFQCPLAIFLWTFLRECLGWEVAPTSCTALFL 1442

Query: 459  NWRLLSRPSRRSTFDLIVKAIVWNIWIARNDCIFN-AIVLPVLSIIQKVVHMIISWYTVA 635
                 SR  ++     I    +W++W +RND +FN  ++    ++I K + +I SW  + 
Sbjct: 1443 EIVEKSRGKKQVLTLFISAGALWSVWKSRNDLVFNKKVMASPAALIHKTLVLIKSWRPLL 1502

Query: 636  SESAKVRLEDTIGII 680
                K   +D + ++
Sbjct: 1503 KSKMKPMEDDMLNLM 1517


Top