BLASTX nr result
ID: Dioscorea21_contig00030709
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00030709 (353 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002447490.1| hypothetical protein SORBIDRAFT_06g001810 [S... 101 6e-20 ref|XP_002332225.1| predicted protein [Populus trichocarpa] gi|2... 101 7e-20 ref|XP_003539325.1| PREDICTED: F-box-like/WD repeat-containing p... 100 2e-19 ref|XP_003611657.1| F-box-like/WD repeat-containing protein TBL1... 99 3e-19 ref|XP_002306492.1| predicted protein [Populus trichocarpa] gi|2... 98 8e-19 >ref|XP_002447490.1| hypothetical protein SORBIDRAFT_06g001810 [Sorghum bicolor] gi|241938673|gb|EES11818.1| hypothetical protein SORBIDRAFT_06g001810 [Sorghum bicolor] Length = 602 Score = 101 bits (252), Expect = 6e-20 Identities = 50/111 (45%), Positives = 72/111 (64%) Frame = +3 Query: 3 GPCSKNLNKPYCVLASGSKDKTVKVWDCFHGQLLYCFNGHRAAVVELEFRPDGEYLASAS 182 GP + N N+ +LAS S D T+K+W+ HG+LLY +GHR V + F PDGEYLAS S Sbjct: 491 GPGTNNPNQQL-LLASASFDSTIKLWEVEHGRLLYSLSGHRQPVYSVAFSPDGEYLASGS 549 Query: 183 DDKCLLIWKIRDGKIMKFHNSCHTSIYNLSWDKEGNLITAGSDYGTLCVVD 335 D+CL IW +++G+I+K + I+ + W+KEG+ I A T+CV+D Sbjct: 550 LDQCLHIWSVKEGRILKTYRG-SGGIFEVCWNKEGSKIAACFSNNTVCVMD 599 >ref|XP_002332225.1| predicted protein [Populus trichocarpa] gi|222831838|gb|EEE70315.1| predicted protein [Populus trichocarpa] Length = 532 Score = 101 bits (251), Expect = 7e-20 Identities = 53/111 (47%), Positives = 73/111 (65%) Frame = +3 Query: 3 GPCSKNLNKPYCVLASGSKDKTVKVWDCFHGQLLYCFNGHRAAVVELEFRPDGEYLASAS 182 GP + N N+P VLAS S D TVK+WD G+LL NGHR V + F P+GEYLAS S Sbjct: 421 GPGTNNPNQPL-VLASASFDSTVKLWDVEFGKLLCSLNGHREPVYSVAFSPNGEYLASGS 479 Query: 183 DDKCLLIWKIRDGKIMKFHNSCHTSIYNLSWDKEGNLITAGSDYGTLCVVD 335 D+C+ IW +R+GKI+K + + + I+ + W+KEG+ I A T+CV+D Sbjct: 480 LDRCINIWSLREGKIVKTY-AGNGGIFEVCWNKEGDKIAACFANNTVCVLD 529 >ref|XP_003539325.1| PREDICTED: F-box-like/WD repeat-containing protein ebi-like [Glycine max] Length = 558 Score = 99.8 bits (247), Expect = 2e-19 Identities = 52/111 (46%), Positives = 71/111 (63%) Frame = +3 Query: 3 GPCSKNLNKPYCVLASGSKDKTVKVWDCFHGQLLYCFNGHRAAVVELEFRPDGEYLASAS 182 GP + N NK VLAS S D TVK+WD G+LLY NGHR V + F P+GEY+AS S Sbjct: 447 GPGTNNPNKNL-VLASASFDSTVKLWDVELGKLLYSLNGHRDRVYSVAFSPNGEYIASGS 505 Query: 183 DDKCLLIWKIRDGKIMKFHNSCHTSIYNLSWDKEGNLITAGSDYGTLCVVD 335 D+ +LIW +++GKI+K + I+ + W+KEG+ I A T+CV+D Sbjct: 506 PDRSMLIWSLKEGKIVKTYTG-DGGIFEVCWNKEGDKIAACFANNTVCVLD 555 >ref|XP_003611657.1| F-box-like/WD repeat-containing protein TBL1XR1 [Medicago truncatula] gi|355512992|gb|AES94615.1| F-box-like/WD repeat-containing protein TBL1XR1 [Medicago truncatula] Length = 625 Score = 99.4 bits (246), Expect = 3e-19 Identities = 51/111 (45%), Positives = 70/111 (63%) Frame = +3 Query: 3 GPCSKNLNKPYCVLASGSKDKTVKVWDCFHGQLLYCFNGHRAAVVELEFRPDGEYLASAS 182 GP + N NK VLAS S D TVK+WD G+L++ NGHR V + F P+GEYLAS S Sbjct: 514 GPGTNNPNKKL-VLASASCDSTVKLWDAELGKLIHSLNGHRDRVYTISFSPNGEYLASGS 572 Query: 183 DDKCLLIWKIRDGKIMKFHNSCHTSIYNLSWDKEGNLITAGSDYGTLCVVD 335 DK + IW + DGKI+K + + I+ + W+KEG+ I A T+C++D Sbjct: 573 PDKSINIWSLNDGKIIKTYKG-NGGIFEVCWNKEGDKIAACFSNNTVCILD 622 >ref|XP_002306492.1| predicted protein [Populus trichocarpa] gi|222855941|gb|EEE93488.1| predicted protein [Populus trichocarpa] Length = 517 Score = 97.8 bits (242), Expect = 8e-19 Identities = 51/111 (45%), Positives = 71/111 (63%) Frame = +3 Query: 3 GPCSKNLNKPYCVLASGSKDKTVKVWDCFHGQLLYCFNGHRAAVVELEFRPDGEYLASAS 182 GP + N N+ VLAS S D TVK+WD G+LL NGHR V + F P+GEYLAS S Sbjct: 406 GPGTNNPNQQL-VLASASFDSTVKLWDVEFGKLLSSLNGHREPVYSVAFSPNGEYLASGS 464 Query: 183 DDKCLLIWKIRDGKIMKFHNSCHTSIYNLSWDKEGNLITAGSDYGTLCVVD 335 D+C+ IW +++GKI+K + + I+ + W+KEG+ I A T+CV+D Sbjct: 465 LDRCINIWSLKEGKIVKTYTG-NGGIFEVCWNKEGDKIAACFANNTVCVLD 514