BLASTX nr result

ID: Dioscorea21_contig00030709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030709
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002447490.1| hypothetical protein SORBIDRAFT_06g001810 [S...   101   6e-20
ref|XP_002332225.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
ref|XP_003539325.1| PREDICTED: F-box-like/WD repeat-containing p...   100   2e-19
ref|XP_003611657.1| F-box-like/WD repeat-containing protein TBL1...    99   3e-19
ref|XP_002306492.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19

>ref|XP_002447490.1| hypothetical protein SORBIDRAFT_06g001810 [Sorghum bicolor]
           gi|241938673|gb|EES11818.1| hypothetical protein
           SORBIDRAFT_06g001810 [Sorghum bicolor]
          Length = 602

 Score =  101 bits (252), Expect = 6e-20
 Identities = 50/111 (45%), Positives = 72/111 (64%)
 Frame = +3

Query: 3   GPCSKNLNKPYCVLASGSKDKTVKVWDCFHGQLLYCFNGHRAAVVELEFRPDGEYLASAS 182
           GP + N N+   +LAS S D T+K+W+  HG+LLY  +GHR  V  + F PDGEYLAS S
Sbjct: 491 GPGTNNPNQQL-LLASASFDSTIKLWEVEHGRLLYSLSGHRQPVYSVAFSPDGEYLASGS 549

Query: 183 DDKCLLIWKIRDGKIMKFHNSCHTSIYNLSWDKEGNLITAGSDYGTLCVVD 335
            D+CL IW +++G+I+K +      I+ + W+KEG+ I A     T+CV+D
Sbjct: 550 LDQCLHIWSVKEGRILKTYRG-SGGIFEVCWNKEGSKIAACFSNNTVCVMD 599


>ref|XP_002332225.1| predicted protein [Populus trichocarpa] gi|222831838|gb|EEE70315.1|
           predicted protein [Populus trichocarpa]
          Length = 532

 Score =  101 bits (251), Expect = 7e-20
 Identities = 53/111 (47%), Positives = 73/111 (65%)
 Frame = +3

Query: 3   GPCSKNLNKPYCVLASGSKDKTVKVWDCFHGQLLYCFNGHRAAVVELEFRPDGEYLASAS 182
           GP + N N+P  VLAS S D TVK+WD   G+LL   NGHR  V  + F P+GEYLAS S
Sbjct: 421 GPGTNNPNQPL-VLASASFDSTVKLWDVEFGKLLCSLNGHREPVYSVAFSPNGEYLASGS 479

Query: 183 DDKCLLIWKIRDGKIMKFHNSCHTSIYNLSWDKEGNLITAGSDYGTLCVVD 335
            D+C+ IW +R+GKI+K + + +  I+ + W+KEG+ I A     T+CV+D
Sbjct: 480 LDRCINIWSLREGKIVKTY-AGNGGIFEVCWNKEGDKIAACFANNTVCVLD 529


>ref|XP_003539325.1| PREDICTED: F-box-like/WD repeat-containing protein ebi-like
           [Glycine max]
          Length = 558

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 52/111 (46%), Positives = 71/111 (63%)
 Frame = +3

Query: 3   GPCSKNLNKPYCVLASGSKDKTVKVWDCFHGQLLYCFNGHRAAVVELEFRPDGEYLASAS 182
           GP + N NK   VLAS S D TVK+WD   G+LLY  NGHR  V  + F P+GEY+AS S
Sbjct: 447 GPGTNNPNKNL-VLASASFDSTVKLWDVELGKLLYSLNGHRDRVYSVAFSPNGEYIASGS 505

Query: 183 DDKCLLIWKIRDGKIMKFHNSCHTSIYNLSWDKEGNLITAGSDYGTLCVVD 335
            D+ +LIW +++GKI+K +      I+ + W+KEG+ I A     T+CV+D
Sbjct: 506 PDRSMLIWSLKEGKIVKTYTG-DGGIFEVCWNKEGDKIAACFANNTVCVLD 555


>ref|XP_003611657.1| F-box-like/WD repeat-containing protein TBL1XR1 [Medicago
           truncatula] gi|355512992|gb|AES94615.1| F-box-like/WD
           repeat-containing protein TBL1XR1 [Medicago truncatula]
          Length = 625

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/111 (45%), Positives = 70/111 (63%)
 Frame = +3

Query: 3   GPCSKNLNKPYCVLASGSKDKTVKVWDCFHGQLLYCFNGHRAAVVELEFRPDGEYLASAS 182
           GP + N NK   VLAS S D TVK+WD   G+L++  NGHR  V  + F P+GEYLAS S
Sbjct: 514 GPGTNNPNKKL-VLASASCDSTVKLWDAELGKLIHSLNGHRDRVYTISFSPNGEYLASGS 572

Query: 183 DDKCLLIWKIRDGKIMKFHNSCHTSIYNLSWDKEGNLITAGSDYGTLCVVD 335
            DK + IW + DGKI+K +   +  I+ + W+KEG+ I A     T+C++D
Sbjct: 573 PDKSINIWSLNDGKIIKTYKG-NGGIFEVCWNKEGDKIAACFSNNTVCILD 622


>ref|XP_002306492.1| predicted protein [Populus trichocarpa] gi|222855941|gb|EEE93488.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/111 (45%), Positives = 71/111 (63%)
 Frame = +3

Query: 3   GPCSKNLNKPYCVLASGSKDKTVKVWDCFHGQLLYCFNGHRAAVVELEFRPDGEYLASAS 182
           GP + N N+   VLAS S D TVK+WD   G+LL   NGHR  V  + F P+GEYLAS S
Sbjct: 406 GPGTNNPNQQL-VLASASFDSTVKLWDVEFGKLLSSLNGHREPVYSVAFSPNGEYLASGS 464

Query: 183 DDKCLLIWKIRDGKIMKFHNSCHTSIYNLSWDKEGNLITAGSDYGTLCVVD 335
            D+C+ IW +++GKI+K +   +  I+ + W+KEG+ I A     T+CV+D
Sbjct: 465 LDRCINIWSLKEGKIVKTYTG-NGGIFEVCWNKEGDKIAACFANNTVCVLD 514


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