BLASTX nr result

ID: Dioscorea21_contig00030708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030708
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17697.3| unnamed protein product [Vitis vinifera]              221   5e-56
ref|NP_001145103.1| uncharacterized protein LOC100278318 [Zea ma...   219   2e-55
tpg|DAA56286.1| TPA: hypothetical protein ZEAMMB73_851729 [Zea m...   218   5e-55
ref|XP_002456801.1| hypothetical protein SORBIDRAFT_03g043050 [S...   217   9e-55
ref|XP_002298590.1| predicted protein [Populus trichocarpa] gi|2...   211   6e-53

>emb|CBI17697.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  221 bits (563), Expect = 5e-56
 Identities = 103/133 (77%), Positives = 119/133 (89%)
 Frame = -3

Query: 457 LLAAVRSVCTSAQPPRLTKFTLHPPKAVQVEFSDGSIVKLSAEFLRVHSPSVDSKIRSIG 278
           +LA +R V +    PRLTKF+LHPPK V+V+F +GS   LSAEFLR+HSP+ DSK+RSIG
Sbjct: 273 MLARLRGVRSIHTTPRLTKFSLHPPKTVEVKFDNGSAFNLSAEFLRIHSPAADSKVRSIG 332

Query: 277 GEKVIFGRRYVGIMSAEPVGNYGVKIIFDDLHKTGIYTWDYFYHLGTNKFSLMRNYIKTL 98
           GEKVIFGRR+VGIMSAEPVGNYGV+I+FDDLHKTGIYTWDYFYHLG+NKF+LMRNYIKTL
Sbjct: 333 GEKVIFGRRHVGIMSAEPVGNYGVRILFDDLHKTGIYTWDYFYHLGSNKFTLMRNYIKTL 392

Query: 97  KKHGLSRDPSRRK 59
           KKHGL+RDP RRK
Sbjct: 393 KKHGLNRDPPRRK 405


>ref|NP_001145103.1| uncharacterized protein LOC100278318 [Zea mays]
           gi|195651255|gb|ACG45095.1| hypothetical protein [Zea
           mays]
          Length = 138

 Score =  219 bits (558), Expect = 2e-55
 Identities = 106/138 (76%), Positives = 123/138 (89%), Gaps = 1/138 (0%)
 Frame = -3

Query: 469 MTALLLAAVRSVCTSA-QPPRLTKFTLHPPKAVQVEFSDGSIVKLSAEFLRVHSPSVDSK 293
           M A L A +R + T+A QPPRLTKF LHPPK V++EF+DGS   LSAEFLRV+SP+VDSK
Sbjct: 1   MAAALGAVLRRLHTAAAQPPRLTKFALHPPKFVEIEFADGSSFHLSAEFLRVYSPAVDSK 60

Query: 292 IRSIGGEKVIFGRRYVGIMSAEPVGNYGVKIIFDDLHKTGIYTWDYFYHLGTNKFSLMRN 113
           IRS+GGEKVIFGRR+VGIMSAE VGNYGV+I+FDDLHKTGI+TWDY +HLG+NKFSLMRN
Sbjct: 61  IRSVGGEKVIFGRRHVGIMSAESVGNYGVRILFDDLHKTGIFTWDYLHHLGSNKFSLMRN 120

Query: 112 YIKTLKKHGLSRDPSRRK 59
           YI+TL+KHGLSRDP RRK
Sbjct: 121 YIRTLRKHGLSRDPQRRK 138


>tpg|DAA56286.1| TPA: hypothetical protein ZEAMMB73_851729 [Zea mays]
          Length = 138

 Score =  218 bits (554), Expect = 5e-55
 Identities = 105/138 (76%), Positives = 122/138 (88%), Gaps = 1/138 (0%)
 Frame = -3

Query: 469 MTALLLAAVRSVCTSA-QPPRLTKFTLHPPKAVQVEFSDGSIVKLSAEFLRVHSPSVDSK 293
           M A L A +R + T+A QPPRLTKF LHPPK V++EF+DGS   LSAEFLRV+SP+ DSK
Sbjct: 1   MAAALGAVLRRLHTAAAQPPRLTKFALHPPKFVEIEFADGSSFHLSAEFLRVYSPAADSK 60

Query: 292 IRSIGGEKVIFGRRYVGIMSAEPVGNYGVKIIFDDLHKTGIYTWDYFYHLGTNKFSLMRN 113
           IRS+GGEKVIFGRR+VGIMSAE VGNYGV+I+FDDLHKTGI+TWDY +HLG+NKFSLMRN
Sbjct: 61  IRSVGGEKVIFGRRHVGIMSAESVGNYGVRILFDDLHKTGIFTWDYLHHLGSNKFSLMRN 120

Query: 112 YIKTLKKHGLSRDPSRRK 59
           YI+TL+KHGLSRDP RRK
Sbjct: 121 YIRTLRKHGLSRDPQRRK 138


>ref|XP_002456801.1| hypothetical protein SORBIDRAFT_03g043050 [Sorghum bicolor]
           gi|241928776|gb|EES01921.1| hypothetical protein
           SORBIDRAFT_03g043050 [Sorghum bicolor]
          Length = 138

 Score =  217 bits (552), Expect = 9e-55
 Identities = 104/138 (75%), Positives = 122/138 (88%), Gaps = 1/138 (0%)
 Frame = -3

Query: 469 MTALLLAAVRSVCTSA-QPPRLTKFTLHPPKAVQVEFSDGSIVKLSAEFLRVHSPSVDSK 293
           M A L A VR + T+A QPPRLTKF LHPPK+V++EF+DGS   LSAEFLRV+SP+ DSK
Sbjct: 1   MAAALGAVVRRLHTAAAQPPRLTKFALHPPKSVEIEFADGSSFHLSAEFLRVYSPAADSK 60

Query: 292 IRSIGGEKVIFGRRYVGIMSAEPVGNYGVKIIFDDLHKTGIYTWDYFYHLGTNKFSLMRN 113
           IRS+GGEKVIFGR++VGIMSAE VGNYGV+I+FDDLHKTGI+TWDY +HLG+NKF LMRN
Sbjct: 61  IRSVGGEKVIFGRQHVGIMSAESVGNYGVRILFDDLHKTGIFTWDYLHHLGSNKFGLMRN 120

Query: 112 YIKTLKKHGLSRDPSRRK 59
           YI+TL+KHGLSRDP RRK
Sbjct: 121 YIRTLRKHGLSRDPQRRK 138


>ref|XP_002298590.1| predicted protein [Populus trichocarpa] gi|222845848|gb|EEE83395.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  211 bits (536), Expect = 6e-53
 Identities = 99/130 (76%), Positives = 115/130 (88%)
 Frame = -3

Query: 448 AVRSVCTSAQPPRLTKFTLHPPKAVQVEFSDGSIVKLSAEFLRVHSPSVDSKIRSIGGEK 269
           A+R V TS   PRLT+FTL  PK V+VE+++GS   LSAEFLR+ SP+VD K+RS+GGEK
Sbjct: 7   AIRRVHTSLDAPRLTRFTLQAPKNVEVEYANGSKFNLSAEFLRIQSPAVDGKVRSVGGEK 66

Query: 268 VIFGRRYVGIMSAEPVGNYGVKIIFDDLHKTGIYTWDYFYHLGTNKFSLMRNYIKTLKKH 89
           VI GRR+VGIMSAEPVGNYGV++IFDDLHKTGIYTWD+FYHLG+NKF+LMRNYIKTLKKH
Sbjct: 67  VIVGRRHVGIMSAEPVGNYGVRMIFDDLHKTGIYTWDFFYHLGSNKFTLMRNYIKTLKKH 126

Query: 88  GLSRDPSRRK 59
           GLSRDP RRK
Sbjct: 127 GLSRDPPRRK 136


Top