BLASTX nr result

ID: Dioscorea21_contig00030698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030698
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525408.1| PREDICTED: general transcription factor IIE ...   146   1e-33
ref|XP_003532609.1| PREDICTED: general transcription factor IIE ...   144   6e-33
gb|AFK38914.1| unknown [Lotus japonicus]                              143   1e-32
ref|XP_003517461.1| PREDICTED: transcription initiation factor I...   143   2e-32
ref|NP_001240869.1| uncharacterized protein LOC100788089 [Glycin...   143   2e-32

>ref|XP_003525408.1| PREDICTED: general transcription factor IIE subunit 2-like [Glycine
           max]
          Length = 279

 Score =  146 bits (369), Expect = 1e-33
 Identities = 70/115 (60%), Positives = 98/115 (85%), Gaps = 2/115 (1%)
 Frame = +3

Query: 66  NFQALKAADQIWILTK-DSKEDIAYPNNPKVMMTVDDDLKQMFRGIELPKDMLDIEKELQ 242
           + QALKAA QIW+L+  DS+EDIAYPN+PKV + VDDDLKQ+FR IELP+DM+DIEK+LQ
Sbjct: 164 DLQALKAAGQIWLLSNFDSQEDIAYPNDPKVHIKVDDDLKQLFRSIELPRDMIDIEKDLQ 223

Query: 243 MAGMKPATNSTQRRAMAKVLSKNTQPKPRKRR-QLNRRPQLTNAHLPELFQDISA 404
             GMKPATN+ QRR+ A++   +++PKP+K++ ++++R +LTNAHLPELFQ +++
Sbjct: 224 KNGMKPATNTAQRRSAAQIQGISSKPKPKKKKSEISKRTKLTNAHLPELFQTLNS 278


>ref|XP_003532609.1| PREDICTED: general transcription factor IIE subunit 2-like [Glycine
           max]
          Length = 280

 Score =  144 bits (364), Expect = 6e-33
 Identities = 68/115 (59%), Positives = 98/115 (85%), Gaps = 2/115 (1%)
 Frame = +3

Query: 66  NFQALKAADQIWILTK-DSKEDIAYPNNPKVMMTVDDDLKQMFRGIELPKDMLDIEKELQ 242
           + QA+KAA QIW+L+  DS+EDIAYPN+PKV + VDDDLK +FR IELP+DM+DIEK+LQ
Sbjct: 165 DLQAMKAAGQIWLLSNFDSQEDIAYPNDPKVHIKVDDDLKHLFRSIELPRDMIDIEKDLQ 224

Query: 243 MAGMKPATNSTQRRAMAKVLSKNTQPKPRKRR-QLNRRPQLTNAHLPELFQDISA 404
             GMKPATN+ QRR+ A++   +++PKP+K++ ++++R +LTNAHLPELFQ++++
Sbjct: 225 KNGMKPATNTAQRRSAAQIQGISSKPKPKKKKSEISKRTKLTNAHLPELFQNLNS 279


>gb|AFK38914.1| unknown [Lotus japonicus]
          Length = 278

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/113 (60%), Positives = 97/113 (85%), Gaps = 2/113 (1%)
 Frame = +3

Query: 66  NFQALKAADQIWILTK-DSKEDIAYPNNPKVMMTVDDDLKQMFRGIELPKDMLDIEKELQ 242
           + QALKAA +IW+L+  DS+EDIAYPN+PKV + VDDDLKQ+FRGIELP+DM+DIE++LQ
Sbjct: 163 DLQALKAAREIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMIDIERDLQ 222

Query: 243 MAGMKPATNSTQRRAMAKVLSKNTQPKPRKRR-QLNRRPQLTNAHLPELFQDI 398
             GMKPATN+ +RR+ A++   +++PKP+K++ ++ +R +LTNAHLPELFQ++
Sbjct: 223 KNGMKPATNTAKRRSAAQMQGISSKPKPKKKKNEITKRTKLTNAHLPELFQNL 275


>ref|XP_003517461.1| PREDICTED: transcription initiation factor IIE subunit beta-like
           [Glycine max]
          Length = 257

 Score =  143 bits (360), Expect = 2e-32
 Identities = 68/113 (60%), Positives = 97/113 (85%), Gaps = 2/113 (1%)
 Frame = +3

Query: 66  NFQALKAADQIWILTK-DSKEDIAYPNNPKVMMTVDDDLKQMFRGIELPKDMLDIEKELQ 242
           + QALKAA +IW+L+  DS+EDIAYPN+PKV + VDDDLKQ+FRGIELP+DM+DIE++LQ
Sbjct: 144 DLQALKAAREIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMIDIERDLQ 203

Query: 243 MAGMKPATNSTQRRAMAKVLSKNTQPKPRKRR-QLNRRPQLTNAHLPELFQDI 398
             GMKPATN+ +RR+ A++   +++PKP+K++ ++ +R +LTNAHLPELFQ++
Sbjct: 204 KNGMKPATNTAKRRSAAQMEGISSKPKPKKKKNEITKRTKLTNAHLPELFQNL 256


>ref|NP_001240869.1| uncharacterized protein LOC100788089 [Glycine max]
           gi|255639642|gb|ACU20115.1| unknown [Glycine max]
          Length = 257

 Score =  143 bits (360), Expect = 2e-32
 Identities = 68/113 (60%), Positives = 97/113 (85%), Gaps = 2/113 (1%)
 Frame = +3

Query: 66  NFQALKAADQIWILTK-DSKEDIAYPNNPKVMMTVDDDLKQMFRGIELPKDMLDIEKELQ 242
           + QALKAA +IW+L+  DS+EDIAYPN+PKV + VDDDLKQ+FRGIELP+DM+DIE++LQ
Sbjct: 144 DLQALKAAREIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMIDIERDLQ 203

Query: 243 MAGMKPATNSTQRRAMAKVLSKNTQPKPRKRR-QLNRRPQLTNAHLPELFQDI 398
             GMKPATN+ +RR+ A++   +++PKP+K++ ++ +R +LTNAHLPELFQ++
Sbjct: 204 KNGMKPATNTAKRRSAAQMEGISSKPKPKKKKNEITKRTKLTNAHLPELFQNL 256


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