BLASTX nr result

ID: Dioscorea21_contig00030693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030693
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB05671.1| chloroplast ferredoxin [Capsicum annuum]               167   6e-40
ref|XP_002443703.1| hypothetical protein SORBIDRAFT_07g000600 [S...   164   7e-39
gb|AAW64931.1| chloroplast ferredoxin I [Nicotiana tabacum]           161   4e-38
gb|ACA34366.1| chloroplast ferredoxin 5 precursor [Zea mays] gi|...   161   6e-38
gb|AAW79312.1| chloroplast ferredixon [Pavlova lutheri]               159   2e-37

>gb|ACB05671.1| chloroplast ferredoxin [Capsicum annuum]
          Length = 145

 Score =  167 bits (424), Expect = 6e-40
 Identities = 76/101 (75%), Positives = 86/101 (85%)
 Frame = -2

Query: 409 VRCMATHTVTLITPSGEVKIKCPSDSYILDMAEEEGHDLPYSCRAGACSSCVGKVVSGTI 230
           + CMAT+ V L+TPSG V+  CP D YILD AEE GHDLPYSCRAGACSSC GK+VSG I
Sbjct: 45  ITCMATYKVKLVTPSGTVQFDCPDDVYILDQAEEAGHDLPYSCRAGACSSCAGKIVSGKI 104

Query: 229 DQSDNSFLDDGQMEGGWVLTCVAYPTSDVTIETHKEDELAG 107
           DQSDNSFLDD QM+ G+VLTCVA+P SDVT+ETHKED+LAG
Sbjct: 105 DQSDNSFLDDDQMDAGYVLTCVAFPQSDVTLETHKEDDLAG 145


>ref|XP_002443703.1| hypothetical protein SORBIDRAFT_07g000600 [Sorghum bicolor]
           gi|241940053|gb|EES13198.1| hypothetical protein
           SORBIDRAFT_07g000600 [Sorghum bicolor]
          Length = 144

 Score =  164 bits (415), Expect = 7e-39
 Identities = 75/102 (73%), Positives = 86/102 (84%)
 Frame = -2

Query: 412 RVRCMATHTVTLITPSGEVKIKCPSDSYILDMAEEEGHDLPYSCRAGACSSCVGKVVSGT 233
           R+R  AT+ V LITP GEV+++ P D YILD AEEEG DLP+SCRAG+CSSC GKVVSGT
Sbjct: 43  RLRAQATYNVKLITPDGEVELQVPDDVYILDQAEEEGIDLPFSCRAGSCSSCAGKVVSGT 102

Query: 232 IDQSDNSFLDDGQMEGGWVLTCVAYPTSDVTIETHKEDELAG 107
           +DQSD SFLDD Q+EGGWVLTC AYPTSDV IETHKE++L G
Sbjct: 103 VDQSDQSFLDDAQVEGGWVLTCAAYPTSDVVIETHKEEDLVG 144


>gb|AAW64931.1| chloroplast ferredoxin I [Nicotiana tabacum]
          Length = 144

 Score =  161 bits (408), Expect = 4e-38
 Identities = 73/102 (71%), Positives = 83/102 (81%)
 Frame = -2

Query: 412 RVRCMATHTVTLITPSGEVKIKCPSDSYILDMAEEEGHDLPYSCRAGACSSCVGKVVSGT 233
           R+ CMA++ V LITP G V+  CP D YILD AEEEGH+LPYSCRAG+CSSC GKV  G 
Sbjct: 43  RITCMASYKVKLITPEGTVEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVTGGN 102

Query: 232 IDQSDNSFLDDGQMEGGWVLTCVAYPTSDVTIETHKEDELAG 107
           +DQSD +FLDD QM GG+VLTCVAYP SDVTIETHKE+EL G
Sbjct: 103 VDQSDGNFLDDDQMAGGFVLTCVAYPQSDVTIETHKEEELTG 144


>gb|ACA34366.1| chloroplast ferredoxin 5 precursor [Zea mays]
           gi|223947527|gb|ACN27847.1| unknown [Zea mays]
           gi|413941575|gb|AFW74224.1| ferredoxin-5, Precursor
           isoform 1 [Zea mays] gi|413941576|gb|AFW74225.1|
           ferredoxin-5, Precursor isoform 2 [Zea mays]
          Length = 138

 Score =  161 bits (407), Expect = 6e-38
 Identities = 74/100 (74%), Positives = 85/100 (85%)
 Frame = -2

Query: 412 RVRCMATHTVTLITPSGEVKIKCPSDSYILDMAEEEGHDLPYSCRAGACSSCVGKVVSGT 233
           R+R  AT+ V LITP GEV+++ P D YILD AEEEG DLPYSCRAG+CSSC GKVVSG+
Sbjct: 37  RLRAQATYNVKLITPEGEVELQVPDDVYILDYAEEEGIDLPYSCRAGSCSSCAGKVVSGS 96

Query: 232 IDQSDNSFLDDGQMEGGWVLTCVAYPTSDVTIETHKEDEL 113
           +DQSD S+LDDGQ+  GWVLTCVAYPTSDV IETHKED+L
Sbjct: 97  VDQSDQSYLDDGQIAAGWVLTCVAYPTSDVVIETHKEDDL 136


>gb|AAW79312.1| chloroplast ferredixon [Pavlova lutheri]
          Length = 137

 Score =  159 bits (403), Expect = 2e-37
 Identities = 74/96 (77%), Positives = 85/96 (88%)
 Frame = -2

Query: 400 MATHTVTLITPSGEVKIKCPSDSYILDMAEEEGHDLPYSCRAGACSSCVGKVVSGTIDQS 221
           ++ +TVTL TPSGE KI+CP D+YILD AEEEG DLPYSCRAGACS+C GKV SGT+DQS
Sbjct: 41  VSMYTVTLKTPSGESKIECPEDTYILDKAEEEGIDLPYSCRAGACSTCCGKVASGTVDQS 100

Query: 220 DNSFLDDGQMEGGWVLTCVAYPTSDVTIETHKEDEL 113
           D SFLDDGQME G+VLTCVAYP+SD TIETHKE++L
Sbjct: 101 DQSFLDDGQMESGFVLTCVAYPSSDCTIETHKEEDL 136


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