BLASTX nr result

ID: Dioscorea21_contig00030683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030683
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18294.1| unknown [Picea sitchensis]                              87   2e-15
ref|XP_001758933.1| predicted protein [Physcomitrella patens sub...    87   2e-15
ref|XP_001773470.1| predicted protein [Physcomitrella patens sub...    86   4e-15
gb|ABD64983.1| formyltetrahydrofolate deformylase, putative [Bra...    84   9e-15
ref|NP_568682.1| putative formyltetrahydrofolate deformylase [Ar...    83   3e-14

>gb|ABR18294.1| unknown [Picea sitchensis]
          Length = 350

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/55 (72%), Positives = 45/55 (81%)
 Frame = -2

Query: 313 SNHNRASNNHVIRFLESHGIPYLYLPITSGNKREDEILNLVVDTDFPVLVRYMQV 149
           SNHNR  N H+IRFLE HGIPY YLP ++ NKRE+EILNLV DTDF VL RYMQ+
Sbjct: 186 SNHNREPNTHIIRFLERHGIPYHYLPTSNENKREEEILNLVGDTDFLVLARYMQI 240


>ref|XP_001758933.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162690070|gb|EDQ76439.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 279

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/56 (73%), Positives = 43/56 (76%)
 Frame = -2

Query: 316 CSNHNRASNNHVIRFLESHGIPYLYLPITSGNKREDEILNLVVDTDFPVLVRYMQV 149
           CSNHNR  N HV+RFLE HGIPY YLP + GNKRE EIL LV  TDF VL RYMQV
Sbjct: 114 CSNHNRGPNTHVLRFLERHGIPYHYLPTSRGNKREAEILELVSGTDFLVLARYMQV 169


>ref|XP_001773470.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162675172|gb|EDQ61670.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 349

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/55 (72%), Positives = 44/55 (80%)
 Frame = -2

Query: 313 SNHNRASNNHVIRFLESHGIPYLYLPITSGNKREDEILNLVVDTDFPVLVRYMQV 149
           SNHNR  N HV+RFLE HGIPY YLP + GNKRE+EIL+LV  TDF VL RYMQV
Sbjct: 185 SNHNRGPNTHVLRFLERHGIPYHYLPTSKGNKREEEILDLVSGTDFLVLARYMQV 239


>gb|ABD64983.1| formyltetrahydrofolate deformylase, putative [Brassica oleracea]
          Length = 332

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/55 (72%), Positives = 43/55 (78%)
 Frame = -2

Query: 313 SNHNRASNNHVIRFLESHGIPYLYLPITSGNKREDEILNLVVDTDFPVLVRYMQV 149
           SNH RASN HV+RFLE HGIPY Y+  T  NKREDEIL LV DTDF VL RYMQ+
Sbjct: 169 SNHGRASNTHVMRFLERHGIPYHYVATTKDNKREDEILELVKDTDFLVLARYMQI 223


>ref|NP_568682.1| putative formyltetrahydrofolate deformylase [Arabidopsis thaliana]
           gi|30695186|ref|NP_851145.1| putative
           formyltetrahydrofolate deformylase [Arabidopsis
           thaliana] gi|16648927|gb|AAL24315.1|
           formyltetrahydrofolate deformylase-like [Arabidopsis
           thaliana] gi|20148261|gb|AAM10021.1|
           formyltetrahydrofolate deformylase-like [Arabidopsis
           thaliana] gi|26450267|dbj|BAC42250.1| unknown protein
           [Arabidopsis thaliana] gi|332008128|gb|AED95511.1|
           putative formyltetrahydrofolate deformylase [Arabidopsis
           thaliana] gi|332008129|gb|AED95512.1| putative
           formyltetrahydrofolate deformylase [Arabidopsis
           thaliana]
          Length = 323

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/55 (70%), Positives = 43/55 (78%)
 Frame = -2

Query: 313 SNHNRASNNHVIRFLESHGIPYLYLPITSGNKREDEILNLVVDTDFPVLVRYMQV 149
           SNH RASN HV+RFLE HGIPY Y+  T  NKRED+IL LV DTDF VL RYMQ+
Sbjct: 160 SNHERASNTHVMRFLERHGIPYHYVSTTKENKREDDILELVKDTDFLVLARYMQI 214


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