BLASTX nr result
ID: Dioscorea21_contig00030674
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00030674 (730 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI31865.3| unnamed protein product [Vitis vinifera] 260 2e-67 ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containi... 260 2e-67 ref|XP_002318245.1| predicted protein [Populus trichocarpa] gi|2... 253 2e-65 ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containi... 236 5e-60 ref|XP_002866920.1| pentatricopeptide repeat-containing protein ... 231 2e-58 >emb|CBI31865.3| unnamed protein product [Vitis vinifera] Length = 573 Score = 260 bits (665), Expect = 2e-67 Identities = 128/208 (61%), Positives = 158/208 (75%) Frame = -3 Query: 626 LISSYARTTTPLSAFLVYRFMLRDGFRPDKYTFPVVLKSCMSFSGIGEARQVHGAIVKMG 447 LI++YA + TP +AFLVY ++ +GF PD YTFPVVLK+C F G+ E QVHG VKMG Sbjct: 76 LIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVKMG 135 Query: 446 FAWHLHALNALVHVYGLCGEFDNAGNLFDEMPLRDVVSWTGLISVYVKAGFFREALALFG 267 F L+ N+L+H Y +CG++ AG +FDEM +RDVVSWTGLIS YV+ G F EA+ LF Sbjct: 136 FLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFL 195 Query: 266 LMDVEPNGATLVSVLVACGRLGDLKLGRRIHGLILKRETGISVVEGNALMDMYVKCEHLD 87 MDV PN AT VSVLVACGR+G L +G+ +HGL+ KR GI +V GNAL+DMYVKCE L Sbjct: 196 KMDVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLC 255 Query: 86 EAKRVFERLPQRDIVSWTSIISGLAQCK 3 EA+++F+ LP RDIVSWTSIISGL QCK Sbjct: 256 EARKLFDELPDRDIVSWTSIISGLVQCK 283 Score = 116 bits (290), Expect = 5e-24 Identities = 77/208 (37%), Positives = 108/208 (51%), Gaps = 3/208 (1%) Frame = -3 Query: 626 LISSYARTTTPLSAFLVYRFMLRDGFRPDKYTFPVVLKSCMSFSGIGEARQVHGAIVKMG 447 LIS Y RT A ++ L+ P+ TF VL +C + + VHG + K Sbjct: 177 LISGYVRTGLFDEAINLF---LKMDVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRA 233 Query: 446 FAWHLHALNALVHVYGLCGEFDNAGNLFDEMPLRDVVSWTGLISVYVKAGFFREALALFG 267 F L NALV +Y C A LFDE+P RD+VSWT +IS V+ +++L LF Sbjct: 234 FGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFY 293 Query: 266 LMD---VEPNGATLVSVLVACGRLGDLKLGRRIHGLILKRETGISVVEGNALMDMYVKCE 96 M VEP+ L SVL AC LG L GR + I ++ + G AL+DMY KC Sbjct: 294 DMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCG 353 Query: 95 HLDEAKRVFERLPQRDIVSWTSIISGLA 12 ++ A +F +P R+I +W +++ GLA Sbjct: 354 CIEMALHIFNGIPNRNIFTWNALLGGLA 381 Score = 78.2 bits (191), Expect = 2e-12 Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 5/187 (2%) Frame = -3 Query: 626 LISSYARTTTPLSAFLVYRFMLRDGFRPDKYTFPVVLKSCMSFSGIGEARQVHGAIVKMG 447 +IS + P + ++ M G PD+ VL +C S + R V I + G Sbjct: 275 IISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQG 334 Query: 446 FAWHLHALNALVHVYGLCGEFDNAGNLFDEMPLRDVVSWTGLISVYVKAGFFREALALFG 267 W +H ALV +Y CG + A ++F+ +P R++ +W L+ G EAL F Sbjct: 335 IEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFE 394 Query: 266 LM---DVEPNGATLVSVLVACGRLGDLKLGRRIHGLILKRETGIS--VVEGNALMDMYVK 102 LM + PN T +++L AC G + GR ++ + S + ++D+ + Sbjct: 395 LMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCR 454 Query: 101 CEHLDEA 81 LDEA Sbjct: 455 AGLLDEA 461 >ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38010-like [Vitis vinifera] Length = 590 Score = 260 bits (665), Expect = 2e-67 Identities = 128/208 (61%), Positives = 158/208 (75%) Frame = -3 Query: 626 LISSYARTTTPLSAFLVYRFMLRDGFRPDKYTFPVVLKSCMSFSGIGEARQVHGAIVKMG 447 LI++YA + TP +AFLVY ++ +GF PD YTFPVVLK+C F G+ E QVHG VKMG Sbjct: 76 LIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVKMG 135 Query: 446 FAWHLHALNALVHVYGLCGEFDNAGNLFDEMPLRDVVSWTGLISVYVKAGFFREALALFG 267 F L+ N+L+H Y +CG++ AG +FDEM +RDVVSWTGLIS YV+ G F EA+ LF Sbjct: 136 FLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFL 195 Query: 266 LMDVEPNGATLVSVLVACGRLGDLKLGRRIHGLILKRETGISVVEGNALMDMYVKCEHLD 87 MDV PN AT VSVLVACGR+G L +G+ +HGL+ KR GI +V GNAL+DMYVKCE L Sbjct: 196 KMDVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLC 255 Query: 86 EAKRVFERLPQRDIVSWTSIISGLAQCK 3 EA+++F+ LP RDIVSWTSIISGL QCK Sbjct: 256 EARKLFDELPDRDIVSWTSIISGLVQCK 283 Score = 116 bits (290), Expect = 5e-24 Identities = 77/208 (37%), Positives = 108/208 (51%), Gaps = 3/208 (1%) Frame = -3 Query: 626 LISSYARTTTPLSAFLVYRFMLRDGFRPDKYTFPVVLKSCMSFSGIGEARQVHGAIVKMG 447 LIS Y RT A ++ L+ P+ TF VL +C + + VHG + K Sbjct: 177 LISGYVRTGLFDEAINLF---LKMDVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRA 233 Query: 446 FAWHLHALNALVHVYGLCGEFDNAGNLFDEMPLRDVVSWTGLISVYVKAGFFREALALFG 267 F L NALV +Y C A LFDE+P RD+VSWT +IS V+ +++L LF Sbjct: 234 FGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFY 293 Query: 266 LMD---VEPNGATLVSVLVACGRLGDLKLGRRIHGLILKRETGISVVEGNALMDMYVKCE 96 M VEP+ L SVL AC LG L GR + I ++ + G AL+DMY KC Sbjct: 294 DMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCG 353 Query: 95 HLDEAKRVFERLPQRDIVSWTSIISGLA 12 ++ A +F +P R+I +W +++ GLA Sbjct: 354 CIEMALHIFNGIPNRNIFTWNALLGGLA 381 Score = 85.5 bits (210), Expect = 1e-14 Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 6/208 (2%) Frame = -3 Query: 626 LISSYARTTTPLSAFLVYRFMLRDGFRPDKYTFPVVLKSCMSFSGIGEARQVHGAIVKMG 447 +IS + P + ++ M G PD+ VL +C S + R V I + G Sbjct: 275 IISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQG 334 Query: 446 FAWHLHALNALVHVYGLCGEFDNAGNLFDEMPLRDVVSWTGLISVYVKAGFFREALALFG 267 W +H ALV +Y CG + A ++F+ +P R++ +W L+ G EAL F Sbjct: 335 IEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFE 394 Query: 266 LM---DVEPNGATLVSVLVACGRLGDLKLGRRIHGLILKRETGIS--VVEGNALMDMYVK 102 LM + PN T +++L AC G + GR ++ + S + ++D+ + Sbjct: 395 LMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCR 454 Query: 101 CEHLDEAKRVFERLP-QRDIVSWTSIIS 21 LDEA + +P D++ W +++S Sbjct: 455 AGLLDEAYKFIRNMPLPPDVLIWGALLS 482 >ref|XP_002318245.1| predicted protein [Populus trichocarpa] gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa] Length = 513 Score = 253 bits (647), Expect = 2e-65 Identities = 126/207 (60%), Positives = 152/207 (73%) Frame = -3 Query: 626 LISSYARTTTPLSAFLVYRFMLRDGFRPDKYTFPVVLKSCMSFSGIGEARQVHGAIVKMG 447 L+S YA P +AFLVYR +++DGF PD +TFP VLKSC F GIGE RQVHG I+KMG Sbjct: 5 LVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVIIKMG 64 Query: 446 FAWHLHALNALVHVYGLCGEFDNAGNLFDEMPLRDVVSWTGLISVYVKAGFFREALALFG 267 F +++ N+LVH Y +C F +A +FDEM +RDVVSWTG+IS YV+AG F EA+ LF Sbjct: 65 FVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVGLFL 124 Query: 266 LMDVEPNGATLVSVLVACGRLGDLKLGRRIHGLILKRETGISVVEGNALMDMYVKCEHLD 87 MDVEPN AT VSVLVACGR G L +G+ IHGL K G+ + NALMDMYVKC L Sbjct: 125 RMDVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLP 184 Query: 86 EAKRVFERLPQRDIVSWTSIISGLAQC 6 AK+VF+ L ++DIVSWTSIISGL QC Sbjct: 185 GAKQVFDELAEKDIVSWTSIISGLVQC 211 Score = 122 bits (305), Expect = 1e-25 Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 3/187 (1%) Frame = -3 Query: 563 LRDGFRPDKYTFPVVLKSCMSFSGIGEARQVHGAIVKMGFAWHLHALNALVHVYGLCGEF 384 LR P+ TF VL +C + + +HG K F L NAL+ +Y CG Sbjct: 124 LRMDVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCL 183 Query: 383 DNAGNLFDEMPLRDVVSWTGLISVYVKAGFFREALALFGLMD---VEPNGATLVSVLVAC 213 A +FDE+ +D+VSWT +IS V+ +EAL LF M +EP+G L SVL AC Sbjct: 184 PGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSAC 243 Query: 212 GRLGDLKLGRRIHGLILKRETGISVVEGNALMDMYVKCEHLDEAKRVFERLPQRDIVSWT 33 RLG L GR +H I ++ + G A++DMY KC ++ + ++F +P +++++W Sbjct: 244 ARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWN 303 Query: 32 SIISGLA 12 ++++GLA Sbjct: 304 ALLNGLA 310 Score = 74.7 bits (182), Expect = 2e-11 Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 5/195 (2%) Frame = -3 Query: 626 LISSYARTTTPLSAFLVYRFMLRDGFRPDKYTFPVVLKSCMSFSGIGEARQVHGAIVKMG 447 +IS + P A +++ M G PD VL +C + R VH I + Sbjct: 204 IISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKA 263 Query: 446 FAWHLHALNALVHVYGLCGEFDNAGNLFDEMPLRDVVSWTGLISVYVKAGFFREALALFG 267 W + A+V +Y CG + + +F+ MP ++V++W L++ G + L LF Sbjct: 264 IKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFE 323 Query: 266 LM---DVEPNGATLVSVLVACGRLGDLKLGRRIHGLILKRETGI--SVVEGNALMDMYVK 102 M + PN T +++L AC G + GR+ + ++ + + ++D+ + Sbjct: 324 EMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWMKGQQYNLPPRLEHYGCMVDLLCR 383 Query: 101 CEHLDEAKRVFERLP 57 LDEA + + +P Sbjct: 384 ARLLDEALELTKAMP 398 >ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38010-like [Glycine max] Length = 595 Score = 236 bits (601), Expect = 5e-60 Identities = 113/208 (54%), Positives = 149/208 (71%) Frame = -3 Query: 626 LISSYARTTTPLSAFLVYRFMLRDGFRPDKYTFPVVLKSCMSFSGIGEARQVHGAIVKMG 447 LIS YA P A L+YR+ +R+GF PD YTFP VLKSC FSGIGE RQ H VK G Sbjct: 80 LISGYASGQLPWLAILIYRWTVRNGFVPDVYTFPAVLKSCAKFSGIGEVRQFHSVSVKTG 139 Query: 446 FAWHLHALNALVHVYGLCGEFDNAGNLFDEMPLRDVVSWTGLISVYVKAGFFREALALFG 267 ++ N LVHVY +CG+ AG +F++M +RDVVSWTGLIS YVK G F EA++LF Sbjct: 140 LWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKTGLFNEAISLFL 199 Query: 266 LMDVEPNGATLVSVLVACGRLGDLKLGRRIHGLILKRETGISVVEGNALMDMYVKCEHLD 87 M+VEPN T VS+L ACG+LG L LG+ IHGL+ K G +V NA++DMY+KC+ + Sbjct: 200 RMNVEPNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEELVVCNAVLDMYMKCDSVT 259 Query: 86 EAKRVFERLPQRDIVSWTSIISGLAQCK 3 +A+++F+ +P++DI+SWTS+I GL QC+ Sbjct: 260 DARKMFDEMPEKDIISWTSMIGGLVQCQ 287 Score = 122 bits (307), Expect = 6e-26 Identities = 74/208 (35%), Positives = 107/208 (51%), Gaps = 3/208 (1%) Frame = -3 Query: 626 LISSYARTTTPLSAFLVYRFMLRDGFRPDKYTFPVVLKSCMSFSGIGEARQVHGAIVKMG 447 LIS Y +T A ++ LR P+ TF +L +C + + +HG + K Sbjct: 181 LISGYVKTGLFNEAISLF---LRMNVEPNVGTFVSILGACGKLGRLNLGKGIHGLVFKCL 237 Query: 446 FAWHLHALNALVHVYGLCGEFDNAGNLFDEMPLRDVVSWTGLISVYVKAGFFREALALFG 267 + L NA++ +Y C +A +FDEMP +D++SWT +I V+ RE+L LF Sbjct: 238 YGEELVVCNAVLDMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFS 297 Query: 266 LMDV---EPNGATLVSVLVACGRLGDLKLGRRIHGLILKRETGISVVEGNALMDMYVKCE 96 M EP+G L SVL AC LG L GR +H I V G L+DMY KC Sbjct: 298 QMQASGFEPDGVILTSVLSACASLGLLDCGRWVHEYIDCHRIKWDVHIGTTLVDMYAKCG 357 Query: 95 HLDEAKRVFERLPQRDIVSWTSIISGLA 12 +D A+R+F +P ++I +W + I GLA Sbjct: 358 CIDMAQRIFNGMPSKNIRTWNAYIGGLA 385 Score = 66.6 bits (161), Expect = 5e-09 Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 3/152 (1%) Frame = -3 Query: 626 LISSYARTTTPLSAFLVYRFMLRDGFRPDKYTFPVVLKSCMSFSGIGEARQVHGAIVKMG 447 +I + +P + ++ M GF PD VL +C S + R VH I Sbjct: 279 MIGGLVQCQSPRESLDLFSQMQASGFEPDGVILTSVLSACASLGLLDCGRWVHEYIDCHR 338 Query: 446 FAWHLHALNALVHVYGLCGEFDNAGNLFDEMPLRDVVSWTGLISVYVKAGFFREALALFG 267 W +H LV +Y CG D A +F+ MP +++ +W I G+ +EAL F Sbjct: 339 IKWDVHIGTTLVDMYAKCGCIDMAQRIFNGMPSKNIRTWNAYIGGLAINGYGKEALKQFE 398 Query: 266 LM---DVEPNGATLVSVLVACGRLGDLKLGRR 180 + PN T ++V AC G + GR+ Sbjct: 399 DLVESGTRPNEVTFLAVFTACCHNGLVDEGRK 430 >ref|XP_002866920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297312756|gb|EFH43179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 559 Score = 231 bits (588), Expect = 2e-58 Identities = 113/208 (54%), Positives = 145/208 (69%) Frame = -3 Query: 626 LISSYARTTTPLSAFLVYRFMLRDGFRPDKYTFPVVLKSCMSFSGIGEARQVHGAIVKMG 447 L+SSYA P VYR + +GF PD +TFP V K+C FSGI E +Q+HG + KMG Sbjct: 77 LLSSYAVCDKPRMTIFVYRVFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGTVTKMG 136 Query: 446 FAWHLHALNALVHVYGLCGEFDNAGNLFDEMPLRDVVSWTGLISVYVKAGFFREALALFG 267 F ++ N+LVH YG+CGE NA +FD+MP+RDVVSWTG+I+ + + G ++EAL F Sbjct: 137 FYDDIYVQNSLVHFYGVCGESRNACKVFDQMPVRDVVSWTGIITGFTRTGLYKEALDTFS 196 Query: 266 LMDVEPNGATLVSVLVACGRLGDLKLGRRIHGLILKRETGISVVEGNALMDMYVKCEHLD 87 MDVEPN AT V LV+ GR+G L LG+ IHGLILKR + IS+ GNAL+DMYVKCE L Sbjct: 197 KMDVEPNLATYVCALVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLS 256 Query: 86 EAKRVFERLPQRDIVSWTSIISGLAQCK 3 +A VF L ++D VSW S+ISGL C+ Sbjct: 257 DAMTVFGELQKKDKVSWNSMISGLVHCE 284 Score = 102 bits (254), Expect = 8e-20 Identities = 56/182 (30%), Positives = 94/182 (51%), Gaps = 4/182 (2%) Frame = -3 Query: 545 PDKYTFPVVLKSCMSFSGIGEARQVHGAIVKMGFAWHLHALNALVHVYGLCGEFDNAGNL 366 P+ T+ L S + + +HG I+K L NAL+ +Y C + +A + Sbjct: 202 PNLATYVCALVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMTV 261 Query: 365 FDEMPLRDVVSWTGLISVYVKAGFFREALALFGLMD----VEPNGATLVSVLVACGRLGD 198 F E+ +D VSW +IS V EA+ LF +M ++P+G L SVL AC LG Sbjct: 262 FGELQKKDKVSWNSMISGLVHCERSNEAIELFSMMQTSSGIKPDGHILTSVLSACASLGA 321 Query: 197 LKLGRRIHGLILKRETGISVVEGNALMDMYVKCEHLDEAKRVFERLPQRDIVSWTSIISG 18 + GR +H +L G A++DMY KC +++ A ++F + ++++ +W +++ G Sbjct: 322 VDYGRWVHEYVLSAGIKWDTHIGTAIVDMYAKCGYIETALKIFNGIRRKNVFTWNALLGG 381 Query: 17 LA 12 LA Sbjct: 382 LA 383 Score = 79.0 bits (193), Expect = 1e-12 Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 5/189 (2%) Frame = -3 Query: 554 GFRPDKYTFPVVLKSCMSFSGIGEARQVHGAIVKMGFAWHLHALNALVHVYGLCGEFDNA 375 G +PD + VL +C S + R VH ++ G W H A+V +Y CG + A Sbjct: 301 GIKPDGHILTSVLSACASLGAVDYGRWVHEYVLSAGIKWDTHIGTAIVDMYAKCGYIETA 360 Query: 374 GNLFDEMPLRDVVSWTGLISVYVKAGFFREALALFGLM---DVEPNGATLVSVLVACGRL 204 +F+ + ++V +W L+ G E+L F M +PN T +++L AC Sbjct: 361 LKIFNGIRRKNVFTWNALLGGLAIHGHGHESLRYFEEMVKLGFKPNLVTFLAILNACCHT 420 Query: 203 GDLKLGRRIHGLILKRETGIS--VVEGNALMDMYVKCEHLDEAKRVFERLPQRDIVSWTS 30 G + GRR + RE +S + L+D++ + LDEA + + +P + V Sbjct: 421 GLVDEGRRYFHKMKTREYNLSPKLEHYGCLIDLFCRAGLLDEALELIKAMPVKPDVRICG 480 Query: 29 IISGLAQCK 3 + L+ CK Sbjct: 481 AV--LSACK 487