BLASTX nr result

ID: Dioscorea21_contig00030659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030659
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAF28623.1| PSII 10KDa phosphoprotein [Nymphaea alba]             148   2e-33
ref|YP_004940538.1| psbH gene product (chloroplast) [Boea hygrom...   143   5e-32
gb|ADM92704.1| photosystem II phosphoprotein [Franklinia alatamaha]   142   1e-31
ref|YP_053183.2| photosystem II protein H [Nymphaea alba] gi|612...   141   1e-31
ref|YP_005097903.1| photosystem II phosphoprotein H (chloroplast...   141   1e-31

>emb|CAF28623.1| PSII 10KDa phosphoprotein [Nymphaea alba]
          Length = 79

 Score =  148 bits (373), Expect = 2e-33
 Identities = 74/79 (93%), Positives = 77/79 (97%)
 Frame = +3

Query: 30  LNKIGFMATQTVEGSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFL 209
           ++ IGFMATQT+EGSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFL
Sbjct: 1   MHGIGFMATQTIEGSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFL 60

Query: 210 SIILEIYNSSVLLDGISAS 266
           SIILEIYNSSVLLDGIS S
Sbjct: 61  SIILEIYNSSVLLDGISLS 79


>ref|YP_004940538.1| psbH gene product (chloroplast) [Boea hygrometrica]
           gi|291059281|gb|ADD72117.1| photosystem II
           phosphoprotein [Olea europaea]
           gi|340549436|gb|AEK53258.1| photosystem II
           phosphoprotein (chloroplast) [Boea hygrometrica]
          Length = 79

 Score =  143 bits (360), Expect = 5e-32
 Identities = 72/77 (93%), Positives = 73/77 (94%)
 Frame = +3

Query: 30  LNKIGFMATQTVEGSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFL 209
           +N IGFMATQTVE SSRSGPRRT VG LLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFL
Sbjct: 1   MNTIGFMATQTVENSSRSGPRRTTVGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFL 60

Query: 210 SIILEIYNSSVLLDGIS 260
           SIILEIYNSSVLLDGIS
Sbjct: 61  SIILEIYNSSVLLDGIS 77


>gb|ADM92704.1| photosystem II phosphoprotein [Franklinia alatamaha]
          Length = 79

 Score =  142 bits (357), Expect = 1e-31
 Identities = 71/77 (92%), Positives = 73/77 (94%)
 Frame = +3

Query: 30  LNKIGFMATQTVEGSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFL 209
           +N IGFMATQTVE SSRSGPRRT VG LLKPLNSEYGKVAPGWGTTPLMGVAMALFA+FL
Sbjct: 1   MNIIGFMATQTVENSSRSGPRRTTVGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAIFL 60

Query: 210 SIILEIYNSSVLLDGIS 260
           SIILEIYNSSVLLDGIS
Sbjct: 61  SIILEIYNSSVLLDGIS 77


>ref|YP_053183.2| photosystem II protein H [Nymphaea alba]
           gi|61214964|sp|Q6EW23.3|PSBH_NYMAL RecName:
           Full=Photosystem II reaction center protein H;
           Short=PSII-H; AltName: Full=Photosystem II 10 kDa
           phosphoprotein
          Length = 73

 Score =  141 bits (356), Expect = 1e-31
 Identities = 71/73 (97%), Positives = 72/73 (98%)
 Frame = +3

Query: 48  MATQTVEGSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEI 227
           MATQT+EGSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEI
Sbjct: 1   MATQTIEGSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEI 60

Query: 228 YNSSVLLDGISAS 266
           YNSSVLLDGIS S
Sbjct: 61  YNSSVLLDGISLS 73


>ref|YP_005097903.1| photosystem II phosphoprotein H (chloroplast) [Colocasia esculenta]
           gi|340536669|gb|AEK48436.1| photosystem II
           phosphoprotein H (chloroplast) [Colocasia esculenta]
           gi|340536756|gb|AEK48522.1| photosystem II
           phosphoprotein H (chloroplast) [Colocasia esculenta]
          Length = 73

 Score =  141 bits (356), Expect = 1e-31
 Identities = 71/73 (97%), Positives = 72/73 (98%)
 Frame = +3

Query: 48  MATQTVEGSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEI 227
           MATQTVEGSSRSGPRRT+VGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEI
Sbjct: 1   MATQTVEGSSRSGPRRTLVGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEI 60

Query: 228 YNSSVLLDGISAS 266
           YNSSVLLDGIS S
Sbjct: 61  YNSSVLLDGISVS 73


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