BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030651
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   224   6e-57
gb|ABG22123.1| polyprotein [Prunus avium]                             211   6e-53
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]          211   6e-53
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     208   3e-52
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   206   2e-51

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  224 bits (571), Expect = 6e-57
 Identities = 105/159 (66%), Positives = 128/159 (80%)
 Frame = -2

Query: 481  ISQAVNVVSRYMSDPGKEHWQAVKGILRYLRGTTNIGLVYDGSSSSTIGVVGYADSDYAG 302
            ++ AV+VVSR+M  PG+EHWQAVK I RYLRGT+++GL+Y G +     V GY+DSDYAG
Sbjct: 1110 LAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDVGLIYGGDTQCL--VTGYSDSDYAG 1167

Query: 301  DLDKLRSLTGYVFTISGCAISWKATLQNTVALSTTEAEYMALTEAVKEAIWLKGLVGDLG 122
            D+D  RS+TGYVFT+ G  +SWKATLQ TV LSTTEAEYMALTEA KE IWLKGLV DLG
Sbjct: 1168 DVDTRRSMTGYVFTLGGSVVSWKATLQPTVTLSTTEAEYMALTEAAKEGIWLKGLVSDLG 1227

Query: 121  LQQESTVVFCDNQGSIDLSKDQMHHERTKHINVRYHFIR 5
            L  +   V+CD+  +I L+KDQ+HHERTKHI+VRYHF+R
Sbjct: 1228 LHHDQATVYCDSLSAICLAKDQVHHERTKHIDVRYHFLR 1266


>gb|ABG22123.1| polyprotein [Prunus avium]
          Length = 276

 Score =  211 bits (536), Expect = 6e-53
 Identities = 101/154 (65%), Positives = 128/154 (83%)
 Frame = -2

Query: 481 ISQAVNVVSRYMSDPGKEHWQAVKGILRYLRGTTNIGLVYDGSSSSTIGVVGYADSDYAG 302
           ISQAV++VSRYM +PGK HWQAVK ILRY+ GT ++GL++     S   VVGY DSDYAG
Sbjct: 123 ISQAVSIVSRYMHNPGKGHWQAVKWILRYILGTVDVGLLFQQDKVSGQCVVGYVDSDYAG 182

Query: 301 DLDKLRSLTGYVFTISGCAISWKATLQNTVALSTTEAEYMALTEAVKEAIWLKGLVGDLG 122
           DLDK RS TG+VFTI+G  +SW++ LQ+TVALSTTEAEYMA+TEA+KEAIWL+GL+ DLG
Sbjct: 183 DLDKRRSTTGFVFTIAGGPVSWRSILQSTVALSTTEAEYMAVTEAIKEAIWLQGLLDDLG 242

Query: 121 LQQESTVVFCDNQGSIDLSKDQMHHERTKHINVR 20
           +QQ+   V+CD+Q +I L+K+Q+HH RTKHI+VR
Sbjct: 243 VQQDHVDVYCDSQSAIYLAKNQVHHARTKHIDVR 276


>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
          Length = 297

 Score =  211 bits (536), Expect = 6e-53
 Identities = 101/160 (63%), Positives = 130/160 (81%)
 Frame = -2

Query: 481 ISQAVNVVSRYMSDPGKEHWQAVKGILRYLRGTTNIGLVYDGSSSSTIGVVGYADSDYAG 302
           ISQAV++VSRYM +PGK  W AVK ILRYL GT ++GL++  +       VGY DSD+AG
Sbjct: 96  ISQAVSMVSRYMHNPGKSQWLAVKWILRYLYGTVDVGLLFKKNCGQQC--VGYCDSDFAG 153

Query: 301 DLDKLRSLTGYVFTISGCAISWKATLQNTVALSTTEAEYMALTEAVKEAIWLKGLVGDLG 122
           DLDK RS +GYVFT+ G ++SW++ LQ+T+ALSTTEAEY+A TEAVKEAIWLKGL+GDLG
Sbjct: 154 DLDKQRSTSGYVFTLGGGSVSWRSILQSTIALSTTEAEYIAATEAVKEAIWLKGLLGDLG 213

Query: 121 LQQESTVVFCDNQGSIDLSKDQMHHERTKHINVRYHFIRE 2
           + QE+  VFCDNQ +I L+K+Q +H RTKHI+V+YH++RE
Sbjct: 214 VIQENIAVFCDNQSAIFLAKNQTYHARTKHIDVKYHYVRE 253


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  208 bits (530), Expect = 3e-52
 Identities = 102/159 (64%), Positives = 128/159 (80%)
 Frame = -2

Query: 481  ISQAVNVVSRYMSDPGKEHWQAVKGILRYLRGTTNIGLVYDGSSSSTIGVVGYADSDYAG 302
            +S A++VVSRYM++PGKEHW+AV+ I RYLRGT++  L +  SS    G+VGY DSD+AG
Sbjct: 1043 LSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSSD---GLVGYVDSDFAG 1099

Query: 301  DLDKLRSLTGYVFTISGCAISWKATLQNTVALSTTEAEYMALTEAVKEAIWLKGLVGDLG 122
            DLD+ RSLTGYVFT+ GCA+SWKA+LQ TVALSTTEAEYMA++EA KE IWL+GL  +L 
Sbjct: 1100 DLDRRRSLTGYVFTVGGCAVSWKASLQATVALSTTEAEYMAISEACKEVIWLRGLYTELC 1159

Query: 121  LQQESTVVFCDNQGSIDLSKDQMHHERTKHINVRYHFIR 5
                   +FCD+Q +I L+KDQM HERTKHI++RYHFIR
Sbjct: 1160 GVTSCINIFCDSQSAICLTKDQMFHERTKHIDLRYHFIR 1198


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  206 bits (524), Expect = 2e-51
 Identities = 103/159 (64%), Positives = 126/159 (79%)
 Frame = -2

Query: 481  ISQAVNVVSRYMSDPGKEHWQAVKGILRYLRGTTNIGLVYDGSSSSTIGVVGYADSDYAG 302
            +S A++VVSRYM++PGKEHW+AV+ I RYLRGT++  L +  S     G+VGY DSD+AG
Sbjct: 1341 LSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSRD---GLVGYVDSDFAG 1397

Query: 301  DLDKLRSLTGYVFTISGCAISWKATLQNTVALSTTEAEYMALTEAVKEAIWLKGLVGDLG 122
            DLD+ RSL GYVFTI GCA+SWKA+LQ TVALSTTEAEYMA++EA KEAIWL+GL   L 
Sbjct: 1398 DLDRGRSLAGYVFTIGGCAVSWKASLQATVALSTTEAEYMAISEACKEAIWLRGLYTVLC 1457

Query: 121  LQQESTVVFCDNQGSIDLSKDQMHHERTKHINVRYHFIR 5
                   +FCD+Q +I L+KDQM HERTKHI+VRYHFIR
Sbjct: 1458 AVTSCINIFCDSQSAICLTKDQMFHERTKHIDVRYHFIR 1496